RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 GRM8O00222 908 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 NBPF7P0C2Y1 421 aaPredicted RBP16.7■□□□□ 0.26
DDX41-204ENST00000504807 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
DDX41-204ENST00000504807 SLFN5Q08AF3 891 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 SREBF2Q12772 1141 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 SCARF1Q14162 830 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 PRAMEF18Q5VWM3 479 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 SLC4A10Q6U841 1118 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 USP17L1Q7RTZ2 530 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 COL6A3P12111 3177 aa16.7■□□□□ 0.26
DDX41-204ENST00000504807 PAPPA2Q9BXP8 1791 aa16.69■□□□□ 0.26
DDX41-204ENST00000504807 G3V3G9 751 aa16.69■□□□□ 0.26
DDX41-204ENST00000504807 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
DDX41-204ENST00000504807 PODNQ7Z5L7 613 aa16.69■□□□□ 0.26
DDX41-204ENST00000504807 AGBL3Q8NEM8 1001 aa16.69■□□□□ 0.26
DDX41-204ENST00000504807 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
DDX41-204ENST00000504807 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
DDX41-204ENST00000504807 CFHR5Q9BXR6 569 aa16.68■□□□□ 0.26
DDX41-204ENST00000504807 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
DDX41-204ENST00000504807 LEMD3Q9Y2U8 911 aa16.68■□□□□ 0.26
DDX41-204ENST00000504807 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 CERS5Q8N5B7 392 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 TMEM106CQ9BVX2 250 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 PUS3Q9BZE2 481 aaKnown RBP16.67■□□□□ 0.26
DDX41-204ENST00000504807 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
DDX41-204ENST00000504807 PTPN22Q9Y2R2 807 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 PCDHAC2Q9Y5I4 1007 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 UTYO14607 1347 aa16.67■□□□□ 0.26
DDX41-204ENST00000504807 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
DDX41-204ENST00000504807 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
DDX41-204ENST00000504807 TRMT2AQ8IZ69 625 aaKnown RBP16.66■□□□□ 0.26
DDX41-204ENST00000504807 ANKRD44Q8N8A2 993 aa16.66■□□□□ 0.26
DDX41-204ENST00000504807 FBXW7Q969H0 707 aa16.66■□□□□ 0.26
DDX41-204ENST00000504807 ARMC5Q96C12 935 aa16.66■□□□□ 0.26
DDX41-204ENST00000504807 SRCIN1Q9C0H9 1055 aa16.66■□□□□ 0.26
DDX41-204ENST00000504807 AOX1Q06278 1338 aa16.66■□□□□ 0.26
DDX41-204ENST00000504807 E9PSI1 815 aa16.65■□□□□ 0.26
DDX41-204ENST00000504807 ANKRD2Q9GZV1 360 aa16.65■□□□□ 0.26
DDX41-204ENST00000504807 CD209Q9NNX6 404 aa16.65■□□□□ 0.26
DDX41-204ENST00000504807 SASH1O94885 1247 aa16.64■□□□□ 0.25
DDX41-204ENST00000504807 GTF2IP78347 998 aa16.64■□□□□ 0.25
DDX41-204ENST00000504807 STRIP1Q5VSL9 837 aa16.64■□□□□ 0.25
DDX41-204ENST00000504807 CD99L2Q8TCZ2 262 aa16.64■□□□□ 0.25
DDX41-204ENST00000504807 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
DDX41-204ENST00000504807 JAG2Q9Y219 1238 aa16.64■□□□□ 0.25
DDX41-204ENST00000504807 ALDH1A1P00352 501 aa16.63■□□□□ 0.25
DDX41-204ENST00000504807 C15orf52Q6ZUT6 534 aaKnown RBP16.63■□□□□ 0.25
DDX41-204ENST00000504807 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
DDX41-204ENST00000504807 ZBED3Q96IU2 234 aaPredicted RBP16.63■□□□□ 0.25
DDX41-204ENST00000504807 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
DDX41-204ENST00000504807 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
DDX41-204ENST00000504807 WNT10BO00744 389 aa16.62■□□□□ 0.25
DDX41-204ENST00000504807 PLIN1O60240 522 aa16.62■□□□□ 0.25
DDX41-204ENST00000504807 MYCP01106 439 aaPredicted RBP16.62■□□□□ 0.25
DDX41-204ENST00000504807 PTPN12Q05209 780 aaKnown RBP16.62■□□□□ 0.25
DDX41-204ENST00000504807 PRKG1Q13976 671 aa16.62■□□□□ 0.25
DDX41-204ENST00000504807 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
DDX41-204ENST00000504807 TTLL5Q6EMB2 1281 aa16.62■□□□□ 0.25
DDX41-204ENST00000504807 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
DDX41-204ENST00000504807 USP44Q9H0E7 712 aa16.62■□□□□ 0.25
DDX41-204ENST00000504807 RBBP6Q7Z6E9 1792 aaKnown RBP16.61■□□□□ 0.25
DDX41-204ENST00000504807 KCNJ4P48050 445 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 MNX1P50219 401 aaPredicted RBP16.61■□□□□ 0.25
DDX41-204ENST00000504807 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 RABL6Q3YEC7 729 aaPredicted RBP16.61■□□□□ 0.25
DDX41-204ENST00000504807 LRRC24Q50LG9 513 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 LDHAL6AQ6ZMR3 332 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 KLHDC4Q8TBB5 520 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 EFCC1Q9HA90 598 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 PITPNM2Q9BZ72 1349 aa16.61■□□□□ 0.25
DDX41-204ENST00000504807 IL1R1P14778 569 aa16.6■□□□□ 0.25
DDX41-204ENST00000504807 NF2P35240 595 aa16.6■□□□□ 0.25
DDX41-204ENST00000504807 SPRYD7Q5W111 196 aa16.6■□□□□ 0.25
DDX41-204ENST00000504807 IFNL1Q8IU54 200 aa16.6■□□□□ 0.25
DDX41-204ENST00000504807 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
DDX41-204ENST00000504807 GYG1P46976 350 aa16.59■□□□□ 0.25
DDX41-204ENST00000504807 FZD1Q9UP38 647 aa16.59■□□□□ 0.25
DDX41-204ENST00000504807 PTPRCP08575 1304 aa16.59■□□□□ 0.25
DDX41-204ENST00000504807 CCER2I3L3R5 266 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 CAP1Q01518 475 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 GRIK5Q16478 980 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 VGLL2Q8N8G2 317 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 DPF3Q92784 378 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 CNNM1Q9NRU3 951 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 MYO3BQ8WXR4 1341 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 SSC5DA1L4H1 1573 aa16.58■□□□□ 0.24
DDX41-204ENST00000504807 MANSC4A6NHS7 340 aaPredicted RBP16.57■□□□□ 0.24
DDX41-204ENST00000504807 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
DDX41-204ENST00000504807 IGF2BP3O00425 579 aaKnown RBP eCLIP16.57■□□□□ 0.24
DDX41-204ENST00000504807 RFX5P48382 616 aaPredicted RBP16.57■□□□□ 0.24
DDX41-204ENST00000504807 SLC9C1Q4G0N8 1177 aa16.57■□□□□ 0.24
DDX41-204ENST00000504807 TAF7LQ5H9L4 462 aa16.57■□□□□ 0.24
DDX41-204ENST00000504807 ARMC9Q7Z3E5 817 aa16.57■□□□□ 0.24
DDX41-204ENST00000504807 FAM84BQ96KN1 310 aaPredicted RBP16.57■□□□□ 0.24
DDX41-204ENST00000504807 SMC4Q9NTJ3 1288 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms