RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TICAM2Q86XR7 235 aa12.61□□□□□ -0.39
TPM3-217ENST00000504663 TBC1D16Q8TBP0 767 aa12.61□□□□□ -0.39
TPM3-217ENST00000504663 FSD1Q9BTV5 496 aa12.61□□□□□ -0.39
TPM3-217ENST00000504663 SCN9AQ15858 1988 aa12.61□□□□□ -0.39
TPM3-217ENST00000504663 FER1L6Q2WGJ9 1857 aa12.61□□□□□ -0.39
TPM3-217ENST00000504663 COL4A5P29400 1685 aa12.61□□□□□ -0.39
TPM3-217ENST00000504663 ZMYM1Q5SVZ6 1142 aa12.6□□□□□ -0.39
TPM3-217ENST00000504663 GORABQ5T7V8 394 aa12.6□□□□□ -0.39
TPM3-217ENST00000504663 PRPF40BQ6NWY9 871 aaKnown RBP12.6□□□□□ -0.39
TPM3-217ENST00000504663 ZNF589Q86UQ0 364 aaPredicted RBP12.6□□□□□ -0.39
TPM3-217ENST00000504663 SPATA5Q8NB90 893 aa12.6□□□□□ -0.39
TPM3-217ENST00000504663 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
TPM3-217ENST00000504663 LAMA4Q16363 1823 aa12.6□□□□□ -0.39
TPM3-217ENST00000504663 TCRBV5S4A2TA0A5A2 114 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 H0YIN7 160 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 FOXP2O15409 715 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 ATP2B4P23634 1241 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 ALDH1B1P30837 517 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 CWC27Q6UX04 472 aaKnown RBP12.59□□□□□ -0.39
TPM3-217ENST00000504663 ZNF384Q8TF68 577 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 SEC62Q99442 399 aaKnown RBP12.59□□□□□ -0.39
TPM3-217ENST00000504663 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 ARFGEF1Q9Y6D6 1849 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 CCDC88AQ3V6T2 1871 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 MAST3O60307 1309 aa12.59□□□□□ -0.39
TPM3-217ENST00000504663 UFL1O94874 794 aa12.58□□□□□ -0.4
TPM3-217ENST00000504663 DPEP1P16444 411 aa12.58□□□□□ -0.4
TPM3-217ENST00000504663 FKBP4Q02790 459 aaKnown RBP eCLIP12.58□□□□□ -0.4
TPM3-217ENST00000504663 PTH1RQ03431 593 aa12.58□□□□□ -0.4
TPM3-217ENST00000504663 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
TPM3-217ENST00000504663 RTFDC1Q9BY42 306 aaPredicted RBP12.58□□□□□ -0.4
TPM3-217ENST00000504663 DIAPH3Q9NSV4 1193 aa12.58□□□□□ -0.4
TPM3-217ENST00000504663 GGA1Q9UJY5 639 aa12.58□□□□□ -0.4
TPM3-217ENST00000504663 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
TPM3-217ENST00000504663 ADAMTSL1Q8N6G6 1762 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 M0R2C6 588 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 HIP1O00291 1037 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 SEMA3EO15041 775 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 RNF113AO15541 343 aaKnown RBP12.57□□□□□ -0.4
TPM3-217ENST00000504663 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
TPM3-217ENST00000504663 IL1R1P14778 569 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 HIBADHP31937 336 aaKnown RBP12.57□□□□□ -0.4
TPM3-217ENST00000504663 ADD2P35612 726 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 HOMEZQ8IX15 550 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 CNKSR1Q969H4 720 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 OSBP2Q969R2 916 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.42e-16■□□□□ 10.8
TPM3-217ENST00000504663 ANKIB1Q9P2G1 1089 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 PALD1Q9ULE6 856 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 NSFL1CQ9UNZ2 370 aaKnown RBP12.57□□□□□ -0.4
TPM3-217ENST00000504663 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 CDK5RAP2Q96SN8 1893 aa12.57□□□□□ -0.4
TPM3-217ENST00000504663 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
TPM3-217ENST00000504663 PDE6AP16499 860 aa12.56□□□□□ -0.4
TPM3-217ENST00000504663 KCNJ4P48050 445 aa12.56□□□□□ -0.4
TPM3-217ENST00000504663 CCDC129Q6ZRS4 1044 aa12.56□□□□□ -0.4
TPM3-217ENST00000504663 KCNB2Q92953 911 aa12.56□□□□□ -0.4
TPM3-217ENST00000504663 HELLSQ9NRZ9 838 aa12.56□□□□□ -0.4
TPM3-217ENST00000504663 TIAM2Q8IVF5 1701 aa12.56□□□□□ -0.4
TPM3-217ENST00000504663 SALL1Q9NSC2 1324 aa12.56□□□□□ -0.4
TPM3-217ENST00000504663 A0A0G2JLW4 131 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 REC8O95072 547 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 TTF1Q15361 905 aaPredicted RBP12.55□□□□□ -0.4
TPM3-217ENST00000504663 UBE3CQ15386 1083 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 GRIK5Q16478 980 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 PUS7LQ9H0K6 701 aaKnown RBP12.55□□□□□ -0.4
TPM3-217ENST00000504663 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 DENND2AQ9ULE3 1009 aa12.55□□□□□ -0.4
TPM3-217ENST00000504663 POLD1P28340 1107 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 HSPA4P34932 840 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 TGFB2P61812 414 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 ADGRA1Q86SQ6 560 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 MPNDQ8N594 471 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 APPBP2Q92624 585 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 MAP4K1Q92918 833 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 TAF6LQ9Y6J9 622 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
TPM3-217ENST00000504663 FOCADQ5VW36 1801 aa12.53□□□□□ -0.4
TPM3-217ENST00000504663 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
TPM3-217ENST00000504663 COL9A3Q14050 684 aaPredicted RBP12.53□□□□□ -0.4
TPM3-217ENST00000504663 NECTIN1Q15223 517 aa12.53□□□□□ -0.4
TPM3-217ENST00000504663 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
TPM3-217ENST00000504663 RUFY2Q8WXA3 655 aa12.53□□□□□ -0.4
TPM3-217ENST00000504663 GNL3LQ9NVN8 582 aaKnown RBP12.53□□□□□ -0.4
TPM3-217ENST00000504663 CD2APQ9Y5K6 639 aa12.53□□□□□ -0.4
TPM3-217ENST00000504663 FAM205AQ6ZU69 1335 aa12.53□□□□□ -0.4
TPM3-217ENST00000504663 LAMB1P07942 1786 aa12.53□□□□□ -0.4
TPM3-217ENST00000504663 MYH2Q9UKX2 1941 aa12.52□□□□□ -0.4
TPM3-217ENST00000504663 IDH1O75874 414 aaKnown RBP12.52□□□□□ -0.41
TPM3-217ENST00000504663 PRDX5P30044 214 aa12.52□□□□□ -0.41
TPM3-217ENST00000504663 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
TPM3-217ENST00000504663 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
TPM3-217ENST00000504663 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms