RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 SUPT20HL1Q3ZLR7 823 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 CFAP100Q494V2 611 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 CERS5Q8N5B7 392 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 CFHR5Q9BXR6 569 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 R3HDMLQ9H3Y0 253 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 PPP2R3BQ9Y5P8 575 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 PSME4Q14997 1843 aa15.4■□□□□ 0.06
NEDD9-209ENST00000504634 IFNL1Q8IU54 200 aa15.39■□□□□ 0.05
NEDD9-209ENST00000504634 MTMR14Q8NCE2 650 aa15.39■□□□□ 0.05
NEDD9-209ENST00000504634 CLMNQ96JQ2 1002 aa15.39■□□□□ 0.05
NEDD9-209ENST00000504634 JAG2Q9Y219 1238 aa15.39■□□□□ 0.05
NEDD9-209ENST00000504634 FANCIQ9NVI1 1328 aa15.39■□□□□ 0.05
NEDD9-209ENST00000504634 COL1A1P02452 1464 aaPredicted RBP15.39■□□□□ 0.05
NEDD9-209ENST00000504634 PLIN1O60240 522 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 ZBTB48P10074 688 aaPredicted RBP15.38■□□□□ 0.05
NEDD9-209ENST00000504634 IREB2P48200 963 aaKnown RBP15.38■□□□□ 0.05
NEDD9-209ENST00000504634 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 CCDC57Q2TAC2 916 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 C15orf52Q6ZUT6 534 aaKnown RBP15.38■□□□□ 0.05
NEDD9-209ENST00000504634 WNK4Q96J92 1243 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 CNNM1Q9NRU3 951 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
NEDD9-209ENST00000504634 TRIM17Q9Y577 477 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 PCDHAC2Q9Y5I4 1007 aa15.38■□□□□ 0.05
NEDD9-209ENST00000504634 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 F6X3S4 739 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 IL1R1P14778 569 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 FOXO4P98177 505 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 OTUD7BQ6GQQ9 843 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 LMBR1LQ6UX01 489 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 LDHAL6AQ6ZMR3 332 aa15.37■□□□□ 0.05
NEDD9-209ENST00000504634 PRMT6Q96LA8 375 aaPredicted RBP15.37■□□□□ 0.05
NEDD9-209ENST00000504634 UNCXA6NJT0 531 aa15.36■□□□□ 0.05
NEDD9-209ENST00000504634 VAMP4O75379 141 aa15.36■□□□□ 0.05
NEDD9-209ENST00000504634 FKBP1AP62942 108 aaKnown RBP15.36■□□□□ 0.05
NEDD9-209ENST00000504634 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
NEDD9-209ENST00000504634 NBPF12Q5TAG4 269 aaPredicted RBP15.36■□□□□ 0.05
NEDD9-209ENST00000504634 IRS2Q9Y4H2 1338 aa15.36■□□□□ 0.05
NEDD9-209ENST00000504634 IGF2BP3O00425 579 aaKnown RBP eCLIP15.35■□□□□ 0.05
NEDD9-209ENST00000504634 RASA3Q14644 834 aa15.35■□□□□ 0.05
NEDD9-209ENST00000504634 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
NEDD9-209ENST00000504634 BEND3Q5T5X7 828 aa15.35■□□□□ 0.05
NEDD9-209ENST00000504634 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
NEDD9-209ENST00000504634 C9orf78Q9NZ63 289 aaPredicted RBP15.35■□□□□ 0.05
NEDD9-209ENST00000504634 SPEF2Q9C093 1822 aa15.35■□□□□ 0.05
NEDD9-209ENST00000504634 GRM8O00222 908 aa15.34■□□□□ 0.05
NEDD9-209ENST00000504634 TNFAIP1Q13829 316 aa15.34■□□□□ 0.05
NEDD9-209ENST00000504634 INTS3Q68E01 1043 aaKnown RBP15.34■□□□□ 0.05
NEDD9-209ENST00000504634 OTOP1Q7RTM1 612 aa15.34■□□□□ 0.05
NEDD9-209ENST00000504634 ANKRD13AQ8IZ07 590 aa15.34■□□□□ 0.05
NEDD9-209ENST00000504634 ERO1AQ96HE7 468 aa15.34■□□□□ 0.05
NEDD9-209ENST00000504634 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
NEDD9-209ENST00000504634 SSC5DA1L4H1 1573 aa15.33■□□□□ 0.05
NEDD9-209ENST00000504634 USP2O75604 605 aaPredicted RBP15.33■□□□□ 0.04
NEDD9-209ENST00000504634 EPHA10Q5JZY3 1008 aa15.33■□□□□ 0.04
NEDD9-209ENST00000504634 MFSD14BQ5SR56 506 aa15.33■□□□□ 0.04
NEDD9-209ENST00000504634 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
NEDD9-209ENST00000504634 TTF2Q9UNY4 1162 aaKnown RBP15.33■□□□□ 0.04
NEDD9-209ENST00000504634 AOX1Q06278 1338 aa15.33■□□□□ 0.04
NEDD9-209ENST00000504634 MYH3P11055 1940 aa15.33■□□□□ 0.04
NEDD9-209ENST00000504634 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
NEDD9-209ENST00000504634 CRHR2Q13324 411 aa15.32■□□□□ 0.04
NEDD9-209ENST00000504634 SLC4A10Q6U841 1118 aa15.32■□□□□ 0.04
NEDD9-209ENST00000504634 ELP3Q9H9T3 547 aa15.32■□□□□ 0.04
NEDD9-209ENST00000504634 ZNF70Q9UC06 446 aaPredicted RBP15.32■□□□□ 0.04
NEDD9-209ENST00000504634 GJA5P36382 358 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 GYG1P46976 350 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 UBE4AQ14139 1066 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 CD99L2Q8TCZ2 262 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
NEDD9-209ENST00000504634 EFCC1Q9HA90 598 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 FAM205AQ6ZU69 1335 aa15.31■□□□□ 0.04
NEDD9-209ENST00000504634 ZNF646O15015 1829 aaPredicted RBP15.3■□□□□ 0.04
NEDD9-209ENST00000504634 TNNI2P48788 182 aa15.3■□□□□ 0.04
NEDD9-209ENST00000504634 SP3Q02447 781 aa15.3■□□□□ 0.04
NEDD9-209ENST00000504634 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
NEDD9-209ENST00000504634 GCC1Q96CN9 775 aa15.3■□□□□ 0.04
NEDD9-209ENST00000504634 OPTNQ96CV9 577 aa15.3■□□□□ 0.04
NEDD9-209ENST00000504634 SRCIN1Q9C0H9 1055 aa15.3■□□□□ 0.04
NEDD9-209ENST00000504634 PTPN22Q9Y2R2 807 aa15.3■□□□□ 0.04
NEDD9-209ENST00000504634 TCP10L2B9ZVM9 353 aa15.29■□□□□ 0.04
NEDD9-209ENST00000504634 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
NEDD9-209ENST00000504634 ALDH1L1O75891 902 aa15.29■□□□□ 0.04
NEDD9-209ENST00000504634 DZIP1LQ8IYY4 767 aaKnown RBP15.29■□□□□ 0.04
NEDD9-209ENST00000504634 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
NEDD9-209ENST00000504634 PTPN18Q99952 460 aa15.29■□□□□ 0.04
NEDD9-209ENST00000504634 TESPA1A2RU30 521 aaPredicted RBP15.28■□□□□ 0.04
NEDD9-209ENST00000504634 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
NEDD9-209ENST00000504634 CRKP46108 304 aa15.28■□□□□ 0.04
NEDD9-209ENST00000504634 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
NEDD9-209ENST00000504634 ARHGEF6Q15052 776 aa15.28■□□□□ 0.04
NEDD9-209ENST00000504634 CSADQ9Y600 493 aa15.28■□□□□ 0.04
NEDD9-209ENST00000504634 MROH5Q6ZUA9 1318 aa15.27■□□□□ 0.04
NEDD9-209ENST00000504634 CCL15-CCL14A0A0B4J2E2 113 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms