RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 ROCK2O75116 1388 aaKnown RBP8.4□□□□□ -1.06
COL4A5-207ENST00000504541 HSPA5P11021 654 aaKnown RBP8.4□□□□□ -1.06
COL4A5-207ENST00000504541 DNM1Q05193 864 aaKnown RBP8.4□□□□□ -1.06
COL4A5-207ENST00000504541 FAM26DQ5JW98 314 aa8.4□□□□□ -1.06
COL4A5-207ENST00000504541 ATCAYQ86WG3 371 aa8.4□□□□□ -1.06
COL4A5-207ENST00000504541 PNMA5Q96PV4 448 aa8.4□□□□□ -1.06
COL4A5-207ENST00000504541 EID1Q9Y6B2 187 aa8.4□□□□□ -1.06
COL4A5-207ENST00000504541 KDM5AP29375 1690 aaKnown RBP8.4□□□□□ -1.07
COL4A5-207ENST00000504541 TMEM2Q9UHN6 1383 aa8.39□□□□□ -1.07
COL4A5-207ENST00000504541 KIF1BO60333 1816 aa8.39□□□□□ -1.07
COL4A5-207ENST00000504541 ZBTB7CA1YPR0 619 aa8.39□□□□□ -1.07
COL4A5-207ENST00000504541 MAP2K3P46734 347 aa8.39□□□□□ -1.07
COL4A5-207ENST00000504541 KCNQ4P56696 695 aa8.39□□□□□ -1.07
COL4A5-207ENST00000504541 SPEM2Q0P670 501 aa8.39□□□□□ -1.07
COL4A5-207ENST00000504541 ZNF385CQ66K41 422 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-207ENST00000504541 PUS7Q96PZ0 661 aaKnown RBP8.39□□□□□ -1.07
COL4A5-207ENST00000504541 FNDC3AQ9Y2H6 1198 aaKnown RBP8.39□□□□□ -1.07
COL4A5-207ENST00000504541 ADAMTSL3P82987 1691 aa8.39□□□□□ -1.07
COL4A5-207ENST00000504541 PIK3C2GO75747 1445 aa8.38□□□□□ -1.07
COL4A5-207ENST00000504541 SOWAHDA6NJG2 315 aa8.38□□□□□ -1.07
COL4A5-207ENST00000504541 SRSF11Q05519 484 aaKnown RBP8.38□□□□□ -1.07
COL4A5-207ENST00000504541 CCINQ13939 588 aa8.38□□□□□ -1.07
COL4A5-207ENST00000504541 FAM182BQ5T319 152 aa8.38□□□□□ -1.07
COL4A5-207ENST00000504541 KANK3Q6NY19 840 aa8.38□□□□□ -1.07
COL4A5-207ENST00000504541 EDEM1Q92611 657 aa8.38□□□□□ -1.07
COL4A5-207ENST00000504541 TMEM131LA2VDJ0 1609 aa8.38□□□□□ -1.07
COL4A5-207ENST00000504541 SETD1BQ9UPS6 1966 aaKnown RBP8.38□□□□□ -1.07
COL4A5-207ENST00000504541 UGGT1Q9NYU2 1555 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 C2CD2LO14523 706 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 XYLBO75191 536 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 ADAMTS2O95450 1211 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
COL4A5-207ENST00000504541 NPR3P17342 541 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 GRIN2CQ14957 1233 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 KRT25Q7Z3Z0 450 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 BHMTQ93088 406 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 BRPF3Q9ULD4 1205 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 TBX22Q9Y458 520 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 RIMS2Q9UQ26 1411 aa8.37□□□□□ -1.07
COL4A5-207ENST00000504541 USP47Q96K76 1375 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 NEXMIFQ5QGS0 1516 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 UBAP1LF5GYI3 381 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 MZF1P28698 734 aaPredicted RBP8.36□□□□□ -1.07
COL4A5-207ENST00000504541 C8orf34Q49A92 452 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 NUDT16Q96DE0 195 aaKnown RBP8.36□□□□□ -1.07
COL4A5-207ENST00000504541 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 IGFLR1Q9H665 355 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 KIAA1210Q9ULL0 1709 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 SCAF11Q99590 1463 aaKnown RBP8.36□□□□□ -1.07
COL4A5-207ENST00000504541 LAMC1P11047 1609 aa8.36□□□□□ -1.07
COL4A5-207ENST00000504541 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
COL4A5-207ENST00000504541 PTPRMP28827 1452 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 ARHGAP23Q9P227 1491 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 SASH3O75995 380 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 PCBP4P57723 403 aaKnown RBP8.35□□□□□ -1.07
COL4A5-207ENST00000504541 DIEXFQ68CQ4 756 aaKnown RBP8.35□□□□□ -1.07
COL4A5-207ENST00000504541 RAB44Q7Z6P3 723 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-207ENST00000504541 ANKLE2Q86XL3 938 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 TMC1Q8TDI8 760 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 TESK2Q96S53 571 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 GZF1Q9H116 711 aaPredicted RBP8.35□□□□□ -1.07
COL4A5-207ENST00000504541 C11orf16Q9NQ32 467 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 POLIQ9UNA4 740 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 SETBP1Q9Y6X0 1596 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 ABCC11Q96J66 1382 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 PLEKHG1Q9ULL1 1385 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 SBNO2Q9Y2G9 1366 aa8.35□□□□□ -1.07
COL4A5-207ENST00000504541 SLIT1O75093 1534 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 NDUFB5O43674 189 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 ARHGEF15O94989 841 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 TARSP26639 723 aaKnown RBP8.34□□□□□ -1.07
COL4A5-207ENST00000504541 USP5P45974 858 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 TMF1P82094 1093 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 SYT9Q86SS6 491 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 SVOPQ8N4V2 548 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 OXCT2Q9BYC2 517 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-207ENST00000504541 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 HCN2Q9UL51 889 aa8.34□□□□□ -1.07
COL4A5-207ENST00000504541 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
COL4A5-207ENST00000504541 CFAP65Q6ZU64 1925 aaKnown RBP8.34□□□□□ -1.07
COL4A5-207ENST00000504541 MADDQ8WXG6 1647 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 NEURL1BA8MQ27 555 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 PDGFAP04085 211 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 LTKP29376 864 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 TBC1D8BQ0IIM8 1120 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 KCNMB2Q9Y691 235 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 C3P01024 1663 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 PIK3R4Q99570 1358 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 FER1L4A9Z1Z3 1794 aa8.33□□□□□ -1.08
COL4A5-207ENST00000504541 TRPM1Q7Z4N2 1603 aa8.32□□□□□ -1.08
COL4A5-207ENST00000504541 FZD6O60353 706 aa8.32□□□□□ -1.08
COL4A5-207ENST00000504541 RARAP10276 462 aa8.32□□□□□ -1.08
COL4A5-207ENST00000504541 ARAFP10398 606 aa8.32□□□□□ -1.08
COL4A5-207ENST00000504541 NFKB1P19838 968 aa8.32□□□□□ -1.08
COL4A5-207ENST00000504541 ADH6P28332 368 aa8.32□□□□□ -1.08
COL4A5-207ENST00000504541 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-207ENST00000504541 TTC39BQ5VTQ0 682 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms