RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PLCD3Q8N3E9 789 aa14.67□□□□□ -0.06
PDLIM5-208ENST00000504489 TDRD7Q8NHU6 1098 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-208ENST00000504489 RHPN1Q8TCX5 695 aa14.67□□□□□ -0.06
PDLIM5-208ENST00000504489 KCNQ5Q9NR82 932 aa14.67□□□□□ -0.06
PDLIM5-208ENST00000504489 ECM29Q5VYK3 1845 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 DDNO94850 711 aaPredicted RBP14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 BCAMP50895 628 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 CLCN6P51797 869 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 TNNI3KQ59H18 835 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 VPS37DQ86XT2 251 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 XAGE2Q96GT9 111 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 NEUROD6Q96NK8 337 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 RWDD1Q9H446 243 aaPredicted RBP14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 FPGT-TNNI3KV9GXZ4 949 aa14.66□□□□□ -0.06
PDLIM5-208ENST00000504489 MYH7P12883 1935 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 MYH2Q9UKX2 1941 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 USP17L3A6NCW0 530 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 USP17L4A6NCW7 530 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 PSMD14O00487 310 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 VIL1P09327 827 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 ADORA1P30542 326 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 STRIP1Q5VSL9 837 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 USP17L1Q7RTZ2 530 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 EAF2Q96CJ1 260 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 L3MBTL3Q96JM7 780 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 FAM205AQ6ZU69 1335 aa14.65□□□□□ -0.06
PDLIM5-208ENST00000504489 APBB1O00213 710 aa14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 CLASRPQ8N2M8 674 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 ZNF579Q8NAF0 562 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 GCC1Q96CN9 775 aa14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 LRRCC1Q9C099 1032 aa14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 GNL3LQ9NVN8 582 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 GJA3Q9Y6H8 435 aa14.64□□□□□ -0.07
PDLIM5-208ENST00000504489 NEFLP07196 543 aa14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 RPS12P25398 132 aaKnown RBP14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 PHKA1P46020 1223 aa14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 GTF2IP78347 998 aa14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 DACT2Q5SW24 774 aa14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 CCDC102BQ68D86 513 aa14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 RSBN1LQ6PCB5 846 aaPredicted RBP14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 DPF2Q92785 391 aa14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 IL1RAPL2Q9NP60 686 aa14.63□□□□□ -0.07
PDLIM5-208ENST00000504489 DOCK2Q92608 1830 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 SEMA3EO15041 775 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 IGHDP01880 384 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 FKBP1AP62942 108 aaKnown RBP14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 GORABQ5T7V8 394 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 AACSQ86V21 672 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 SMC5Q8IY18 1101 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 ZNF784Q8NCA9 323 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 AGBL3Q8NEM8 1001 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 GMLQ99445 158 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 DBNDD2Q9BQY9 259 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 CCDC8Q9H0W5 538 aaPredicted RBP14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 DBNLQ9UJU6 430 aaKnown RBP14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 AK9Q5TCS8 1911 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 MYO3BQ8WXR4 1341 aa14.62□□□□□ -0.07
PDLIM5-208ENST00000504489 FRAT2O75474 233 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 VEGFAP15692 232 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 GMPSP49915 693 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 SCNN1DP51172 638 aa14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 ZNF526Q8TF50 670 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 GPBP1L1Q9HC44 474 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 DENND2AQ9ULE3 1009 aa14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 IQSEC3Q9UPP2 1182 aaPredicted RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
PDLIM5-208ENST00000504489 IQCA1LA6NCM1 817 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 POTECB2RU33 542 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 IFIT2P09913 472 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 UQCRFS1P1P0C7P4 283 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 CCDC158Q5M9N0 1113 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 TBC1D22AQ8WUA7 517 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 FBXW7Q969H0 707 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 RRAGCQ9HB90 399 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 TLR7Q9NYK1 1049 aaKnown RBP14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 GPRC5DQ9NZD1 345 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 ADAMTSL1Q8N6G6 1762 aa14.6□□□□□ -0.07
PDLIM5-208ENST00000504489 COL1A1P02452 1464 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-208ENST00000504489 LMOD1P29536 600 aaPredicted RBP14.59□□□□□ -0.07
PDLIM5-208ENST00000504489 MMP14P50281 582 aa14.59□□□□□ -0.07
PDLIM5-208ENST00000504489 CERS5Q8N5B7 392 aa14.59□□□□□ -0.07
PDLIM5-208ENST00000504489 WDR66Q8TBY9 1149 aa14.59□□□□□ -0.07
PDLIM5-208ENST00000504489 NMRK2Q9NPI5 230 aa14.59□□□□□ -0.07
PDLIM5-208ENST00000504489 HACL1Q9UJ83 578 aa14.59□□□□□ -0.07
PDLIM5-208ENST00000504489 MAST2Q6P0Q8 1798 aa14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 CHAF1AQ13111 956 aaPredicted RBP14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 RASGRF1Q13972 1273 aa14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 TTC39AQ5SRH9 613 aa14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 ANKRD45Q5TZF3 282 aa14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 MXD3Q9BW11 206 aa14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 CNOT7Q9UIV1 285 aaKnown RBP14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 SALL1Q9NSC2 1324 aa14.58□□□□□ -0.08
PDLIM5-208ENST00000504489 H7C1D1 291 aa14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 USP17L8P0C7I0 530 aa14.57□□□□□ -0.08
PDLIM5-208ENST00000504489 EPS15P42566 896 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms