RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 SIL1Q9H173 461 aa22.27■■□□□ 1.16
NFKB1-204ENST00000504044 COPRSQ9NQ92 184 aa22.27■■□□□ 1.16
NFKB1-204ENST00000504044 TLL2Q9Y6L7 1015 aa22.27■■□□□ 1.16
NFKB1-204ENST00000504044 MTX1Q13505 466 aa22.26■■□□□ 1.15
NFKB1-204ENST00000504044 DLGAP5Q15398 846 aa22.26■■□□□ 1.15
NFKB1-204ENST00000504044 ITPRIPQ8IWB1 547 aa22.26■■□□□ 1.15
NFKB1-204ENST00000504044 C2orf69Q8N8R5 385 aa22.26■■□□□ 1.15
NFKB1-204ENST00000504044 GNL3LQ9NVN8 582 aaKnown RBP22.26■■□□□ 1.15
NFKB1-204ENST00000504044 FAM205AQ6ZU69 1335 aa22.26■■□□□ 1.15
NFKB1-204ENST00000504044 PSME4Q14997 1843 aa22.25■■□□□ 1.15
NFKB1-204ENST00000504044 MFSD14BQ5SR56 506 aa22.25■■□□□ 1.15
NFKB1-204ENST00000504044 CST9Q5W186 159 aa22.25■■□□□ 1.15
NFKB1-204ENST00000504044 FBXO33Q7Z6M2 555 aa22.25■■□□□ 1.15
NFKB1-204ENST00000504044 HHIPL1Q96JK4 782 aa22.25■■□□□ 1.15
NFKB1-204ENST00000504044 WNT10BO00744 389 aa22.24■■□□□ 1.15
NFKB1-204ENST00000504044 ATP2B3Q16720 1220 aa22.24■■□□□ 1.15
NFKB1-204ENST00000504044 APOBEC3FQ8IUX4 373 aaKnown RBP22.24■■□□□ 1.15
NFKB1-204ENST00000504044 ADM5C9JUS6 153 aa22.23■■□□□ 1.15
NFKB1-204ENST00000504044 NF2P35240 595 aa22.23■■□□□ 1.15
NFKB1-204ENST00000504044 VEGFBP49765 207 aa22.23■■□□□ 1.15
NFKB1-204ENST00000504044 FMR1Q06787 632 aaKnown RBP eCLIP22.23■■□□□ 1.15
NFKB1-204ENST00000504044 ATG9AQ7Z3C6 839 aa22.23■■□□□ 1.15
NFKB1-204ENST00000504044 AKAP2Q9Y2D5 859 aa22.23■■□□□ 1.15
NFKB1-204ENST00000504044 CEP350Q5VT06 3117 aa22.22■■□□□ 1.15
NFKB1-204ENST00000504044 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
NFKB1-204ENST00000504044 FGFR2P21802 821 aa22.22■■□□□ 1.15
NFKB1-204ENST00000504044 RBM5P52756 815 aaKnown RBP eCLIP22.22■■□□□ 1.15
NFKB1-204ENST00000504044 NBPF9Q3BBW0 867 aa22.22■■□□□ 1.15
NFKB1-204ENST00000504044 SAPCD2Q86UD0 394 aa22.22■■□□□ 1.15
NFKB1-204ENST00000504044 MTMR14Q8NCE2 650 aa22.22■■□□□ 1.15
NFKB1-204ENST00000504044 CHMP4BQ9H444 224 aaKnown RBP22.22■■□□□ 1.15
NFKB1-204ENST00000504044 GBA2Q9HCG7 927 aaPredicted RBP22.22■■□□□ 1.15
NFKB1-204ENST00000504044 TNNQ9UQP3 1299 aa22.22■■□□□ 1.15
NFKB1-204ENST00000504044 CHAF1AQ13111 956 aaPredicted RBP22.21■■□□□ 1.15
NFKB1-204ENST00000504044 G3BP1Q13283 466 aaKnown RBP eCLIP22.21■■□□□ 1.15
NFKB1-204ENST00000504044 CERS5Q8N5B7 392 aa22.21■■□□□ 1.15
NFKB1-204ENST00000504044 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.21■■□□□ 1.15
NFKB1-204ENST00000504044 AIDAQ96BJ3 306 aa22.21■■□□□ 1.15
NFKB1-204ENST00000504044 PA2G4Q9UQ80 394 aaKnown RBP22.21■■□□□ 1.15
NFKB1-204ENST00000504044 JAG2Q9Y219 1238 aa22.21■■□□□ 1.15
NFKB1-204ENST00000504044 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
NFKB1-204ENST00000504044 BCAMP50895 628 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 FKBP1BP68106 108 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 CDCA5Q96FF9 252 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 CAPNS2Q96L46 248 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 SERPINA10Q9UK55 444 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 RCAN3Q9UKA8 241 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 TTF2Q9UNY4 1162 aaKnown RBP22.2■■□□□ 1.14
NFKB1-204ENST00000504044 SUGT1Q9Y2Z0 365 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 MAST3O60307 1309 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 A0A1B0GUL6 1792 aa22.2■■□□□ 1.14
NFKB1-204ENST00000504044 HUNKP57058 714 aa22.19■■□□□ 1.14
NFKB1-204ENST00000504044 MAP2K1Q02750 393 aaPredicted RBP22.19■■□□□ 1.14
NFKB1-204ENST00000504044 CFAP100Q494V2 611 aa22.19■■□□□ 1.14
NFKB1-204ENST00000504044 WDR66Q8TBY9 1149 aa22.19■■□□□ 1.14
NFKB1-204ENST00000504044 ASTN2O75129 1339 aaPredicted RBP22.19■■□□□ 1.14
NFKB1-204ENST00000504044 SEMA3EO15041 775 aa22.18■■□□□ 1.14
NFKB1-204ENST00000504044 HSPA1AP0DMV8 641 aaKnown RBP22.18■■□□□ 1.14
NFKB1-204ENST00000504044 HSPA1BP0DMV9 641 aaKnown RBP22.18■■□□□ 1.14
NFKB1-204ENST00000504044 GRM1Q13255 1194 aa22.18■■□□□ 1.14
NFKB1-204ENST00000504044 BEGAINQ9BUH8 593 aa22.18■■□□□ 1.14
NFKB1-204ENST00000504044 IQSEC3Q9UPP2 1182 aaPredicted RBP22.18■■□□□ 1.14
NFKB1-204ENST00000504044 PPP2R3BQ9Y5P8 575 aa22.18■■□□□ 1.14
NFKB1-204ENST00000504044 TNFAIP1Q13829 316 aa22.17■■□□□ 1.14
NFKB1-204ENST00000504044 SPDYE2BA6NHP3 402 aa22.16■■□□□ 1.14
NFKB1-204ENST00000504044 SPDYE6P0CI01 402 aa22.16■■□□□ 1.14
NFKB1-204ENST00000504044 MAP2K2P36507 400 aa22.16■■□□□ 1.14
NFKB1-204ENST00000504044 HDLBPQ00341 1268 aaKnown RBP22.16■■□□□ 1.14
NFKB1-204ENST00000504044 OS9Q13438 667 aaPredicted RBP22.16■■□□□ 1.14
NFKB1-204ENST00000504044 CYP4F22Q6NT55 531 aa22.16■■□□□ 1.14
NFKB1-204ENST00000504044 ZBED3Q96IU2 234 aaPredicted RBP22.16■■□□□ 1.14
NFKB1-204ENST00000504044 DENND2AQ9ULE3 1009 aa22.16■■□□□ 1.14
NFKB1-204ENST00000504044 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
NFKB1-204ENST00000504044 TRPM7Q96QT4 1865 aa22.15■■□□□ 1.14
NFKB1-204ENST00000504044 ZBTB7BO15156 539 aaPredicted RBP22.15■■□□□ 1.14
NFKB1-204ENST00000504044 ATP8B2P98198 1209 aa22.15■■□□□ 1.14
NFKB1-204ENST00000504044 MVPQ14764 893 aaKnown RBP22.15■■□□□ 1.14
NFKB1-204ENST00000504044 ZGPATQ8N5A5 531 aaKnown RBP22.15■■□□□ 1.14
NFKB1-204ENST00000504044 CCDC102AQ96A19 550 aa22.15■■□□□ 1.14
NFKB1-204ENST00000504044 RLBP1P12271 317 aa22.14■■□□□ 1.13
NFKB1-204ENST00000504044 NOGQ13253 232 aa22.14■■□□□ 1.13
NFKB1-204ENST00000504044 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
NFKB1-204ENST00000504044 GORABQ5T7V8 394 aa22.14■■□□□ 1.13
NFKB1-204ENST00000504044 RGMBQ6NW40 437 aa22.14■■□□□ 1.13
NFKB1-204ENST00000504044 TEKT1Q969V4 418 aa22.14■■□□□ 1.13
NFKB1-204ENST00000504044 DDX19BQ9UMR2 479 aa22.14■■□□□ 1.13
NFKB1-204ENST00000504044 PNMA6EA0A0J9YXQ4 647 aa22.13■■□□□ 1.13
NFKB1-204ENST00000504044 TFCP2Q12800 502 aa22.13■■□□□ 1.13
NFKB1-204ENST00000504044 MRIQ9BWK5 157 aa22.13■■□□□ 1.13
NFKB1-204ENST00000504044 VEZTQ9HBM0 779 aa22.13■■□□□ 1.13
NFKB1-204ENST00000504044 TMOD2Q9NZR1 351 aa22.13■■□□□ 1.13
NFKB1-204ENST00000504044 A0A1B0GUL7 405 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 ZBTB22O15209 634 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 CRKP46108 304 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 TNNI2P48788 182 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 ARMC9Q7Z3E5 817 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 PANK1Q8TE04 598 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 SSH3Q8TE77 659 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 NEUROD6Q96NK8 337 aa22.12■■□□□ 1.13
NFKB1-204ENST00000504044 DEFB129Q9H1M3 183 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms