RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 ZKSCAN3Q9BRR0 538 aa7.95□□□□□ -1.14
SUB1-204ENST00000504016 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
SUB1-204ENST00000504016 MED26O95402 600 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 NPR3P17342 541 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 USP5P45974 858 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 PREPP48147 710 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 IKBKEQ14164 716 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 HGSNATQ68CP4 663 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 BEND4Q6ZU67 534 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 ZDHHC13Q8IUH4 622 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 SNX29Q8TEQ0 813 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 DBNDD2Q9BQY9 259 aa7.94□□□□□ -1.14
SUB1-204ENST00000504016 FOXD3Q9UJU5 478 aaPredicted RBP7.94□□□□□ -1.14
SUB1-204ENST00000504016 SOX1O00570 391 aaPredicted RBP7.93□□□□□ -1.14
SUB1-204ENST00000504016 ABL1P00519 1130 aa7.93□□□□□ -1.14
SUB1-204ENST00000504016 GRIK1P39086 918 aa7.93□□□□□ -1.14
SUB1-204ENST00000504016 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.93□□□□□ -1.14
SUB1-204ENST00000504016 ASAP3Q8TDY4 903 aa7.93□□□□□ -1.14
SUB1-204ENST00000504016 FAM83CQ9BQN1 747 aa7.93□□□□□ -1.14
SUB1-204ENST00000504016 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
SUB1-204ENST00000504016 MEGF11A6BM72 1044 aa7.92□□□□□ -1.14
SUB1-204ENST00000504016 GAS2O43903 313 aaKnown RBP7.92□□□□□ -1.14
SUB1-204ENST00000504016 FKBP4Q02790 459 aaKnown RBP eCLIP7.92□□□□□ -1.14
SUB1-204ENST00000504016 SF3B2Q13435 895 aaKnown RBP7.92□□□□□ -1.14
SUB1-204ENST00000504016 CARNS1A5YM72 827 aa7.91□□□□□ -1.14
SUB1-204ENST00000504016 NUTM2GQ5VZR2 741 aa7.91□□□□□ -1.14
SUB1-204ENST00000504016 INTS5Q6P9B9 1019 aaKnown RBP7.91□□□□□ -1.14
SUB1-204ENST00000504016 VN1R5Q7Z5H4 357 aa7.91□□□□□ -1.14
SUB1-204ENST00000504016 USP26Q9BXU7 913 aa7.91□□□□□ -1.14
SUB1-204ENST00000504016 ANO2Q9NQ90 1003 aa7.91□□□□□ -1.14
SUB1-204ENST00000504016 AMOTL2Q9Y2J4 779 aa7.91□□□□□ -1.14
SUB1-204ENST00000504016 HIF3AQ9Y2N7 669 aa7.91□□□□□ -1.14
SUB1-204ENST00000504016 KIAA1324LA8MWY0 1029 aaPredicted RBP7.9□□□□□ -1.14
SUB1-204ENST00000504016 FZD6O60353 706 aa7.9□□□□□ -1.14
SUB1-204ENST00000504016 MCTP1Q6DN14 999 aa7.9□□□□□ -1.14
SUB1-204ENST00000504016 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
SUB1-204ENST00000504016 SHKBP1Q8TBC3 707 aa7.9□□□□□ -1.14
SUB1-204ENST00000504016 LATS2Q9NRM7 1088 aa7.9□□□□□ -1.14
SUB1-204ENST00000504016 CCDC87Q9NVE4 849 aa7.9□□□□□ -1.14
SUB1-204ENST00000504016 RXRBP28702 533 aa7.89□□□□□ -1.15
SUB1-204ENST00000504016 ZNF211Q13398 564 aaPredicted RBP7.89□□□□□ -1.15
SUB1-204ENST00000504016 PHLDB3Q6NSJ2 640 aa7.89□□□□□ -1.15
SUB1-204ENST00000504016 BHLHE41Q9C0J9 482 aaPredicted RBP7.89□□□□□ -1.15
SUB1-204ENST00000504016 CYP4F12Q9HCS2 524 aa7.89□□□□□ -1.15
SUB1-204ENST00000504016 PRR19A6NJB7 356 aa7.88□□□□□ -1.15
SUB1-204ENST00000504016 WDR64B1ANS9 1081 aa7.88□□□□□ -1.15
SUB1-204ENST00000504016 MAP4P27816 1152 aaKnown RBP7.88□□□□□ -1.15
SUB1-204ENST00000504016 PEAR1Q5VY43 1037 aaPredicted RBP7.88□□□□□ -1.15
SUB1-204ENST00000504016 GJD3Q8N144 294 aa7.88□□□□□ -1.15
SUB1-204ENST00000504016 TMPRSS13Q9BYE2 586 aa7.88□□□□□ -1.15
SUB1-204ENST00000504016 SOX17Q9H6I2 414 aaPredicted RBP7.88□□□□□ -1.15
SUB1-204ENST00000504016 ZFYVE28Q9HCC9 887 aa7.88□□□□□ -1.15
SUB1-204ENST00000504016 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
SUB1-204ENST00000504016 POLR3DP05423 398 aaPredicted RBP7.87□□□□□ -1.15
SUB1-204ENST00000504016 ESRRAP11474 423 aaPredicted RBP7.87□□□□□ -1.15
SUB1-204ENST00000504016 IRAK1P51617 712 aa7.87□□□□□ -1.15
SUB1-204ENST00000504016 GP2P55259 537 aaKnown RBP7.87□□□□□ -1.15
SUB1-204ENST00000504016 GSTM4Q03013 218 aa7.87□□□□□ -1.15
SUB1-204ENST00000504016 SGO2Q562F6 1265 aa7.87□□□□□ -1.15
SUB1-204ENST00000504016 MFSD14AQ96MC6 490 aa7.87□□□□□ -1.15
SUB1-204ENST00000504016 METTL12A8MUP2 240 aa7.86□□□□□ -1.15
SUB1-204ENST00000504016 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
SUB1-204ENST00000504016 SMG8Q8ND04 991 aaKnown RBP7.86□□□□□ -1.15
SUB1-204ENST00000504016 GIMAP7Q8NHV1 300 aa7.86□□□□□ -1.15
SUB1-204ENST00000504016 SUGCTQ9HAC7 445 aa7.86□□□□□ -1.15
SUB1-204ENST00000504016 COL17A1Q9UMD9 1497 aaPredicted RBP7.86□□□□□ -1.15
SUB1-204ENST00000504016 SPINK2P20155 84 aa7.85□□□□□ -1.15
SUB1-204ENST00000504016 USP11P51784 963 aa7.85□□□□□ -1.15
SUB1-204ENST00000504016 FBXL6Q8N531 539 aa7.85□□□□□ -1.15
SUB1-204ENST00000504016 ATG3Q9NT62 314 aa7.85□□□□□ -1.15
SUB1-204ENST00000504016 OAS3Q9Y6K5 1087 aaKnown RBP7.85□□□□□ -1.15
SUB1-204ENST00000504016 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
SUB1-204ENST00000504016 TIAF1O95411 115 aa7.84□□□□□ -1.15
SUB1-204ENST00000504016 DLGAP3O95886 979 aa7.84□□□□□ -1.15
SUB1-204ENST00000504016 DRD2P14416 443 aa7.84□□□□□ -1.15
SUB1-204ENST00000504016 NFKBIBQ15653 356 aa7.84□□□□□ -1.15
SUB1-204ENST00000504016 DTX1Q86Y01 620 aa7.84□□□□□ -1.15
SUB1-204ENST00000504016 A0A096LPE4 126 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 FAM95CA0A1B0GW59 222 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 A0A1W2PPZ6 126 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 PAX4O43316 350 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 ADAMTS4O75173 837 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 WNT11O96014 354 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 PAOXQ6QHF9 649 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 PIM2Q9P1W9 311 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 BRPF3Q9ULD4 1205 aa7.83□□□□□ -1.16
SUB1-204ENST00000504016 A0A1W2PP55 124 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 ICMTO60725 284 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 PCDH1Q08174 1060 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 B4GALNT3Q6L9W6 998 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 GALNT12Q8IXK2 581 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 FBLIM1Q8WUP2 373 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 OSBPL1AQ9BXW6 950 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 LIN7BQ9HAP6 207 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 EGFL7Q9UHF1 273 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 LEMD3Q9Y2U8 911 aa7.82□□□□□ -1.16
SUB1-204ENST00000504016 F13BP05160 661 aa7.81□□□□□ -1.16
SUB1-204ENST00000504016 NEFLP07196 543 aa7.81□□□□□ -1.16
SUB1-204ENST00000504016 HOXA10P31260 410 aaPredicted RBP7.81□□□□□ -1.16
SUB1-204ENST00000504016 SOX4Q06945 474 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms