RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 BCL11AQ9H165 835 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 DDX19BQ9UMR2 479 aa11.3□□□□□ -0.6
NR1I3-219ENST00000504010 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
NR1I3-219ENST00000504010 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
NR1I3-219ENST00000504010 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
NR1I3-219ENST00000504010 SIL1Q9H173 461 aa11.29□□□□□ -0.6
NR1I3-219ENST00000504010 ZBTB40Q9NUA8 1239 aa11.29□□□□□ -0.6
NR1I3-219ENST00000504010 SPEF2Q9C093 1822 aa11.29□□□□□ -0.6
NR1I3-219ENST00000504010 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 WTIPA6NIX2 430 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-219ENST00000504010 YDJCA8MPS7 323 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 ADM5C9JUS6 153 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 GPR25O00155 361 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 GRAPQ13588 217 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 TBC1D10BQ4KMP7 808 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-219ENST00000504010 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 SAMD7Q7Z3H4 446 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-219ENST00000504010 GRAPLQ8TC17 118 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-219ENST00000504010 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
NR1I3-219ENST00000504010 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
NR1I3-219ENST00000504010 MYH3P11055 1940 aa11.27□□□□□ -0.6
NR1I3-219ENST00000504010 SHTN1A0MZ66 631 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 ANKRD18BA2A2Z9 1011 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 SNAP23O00161 211 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 APBB1O00213 710 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 SRGAP3O43295 1099 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 TM4SF4P48230 202 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
NR1I3-219ENST00000504010 IFIT5Q13325 482 aaKnown RBP11.27□□□□□ -0.61
NR1I3-219ENST00000504010 CCDC57Q2TAC2 916 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-219ENST00000504010 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 CEP85Q6P2H3 762 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 ANKRD18AQ8IVF6 992 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 SIRT2Q8IXJ6 389 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
NR1I3-219ENST00000504010 PSMD14O00487 310 aa11.26□□□□□ -0.61
NR1I3-219ENST00000504010 FKTNO75072 461 aa11.26□□□□□ -0.61
NR1I3-219ENST00000504010 TBC1D8O95759 1140 aa11.26□□□□□ -0.61
NR1I3-219ENST00000504010 HSP90B1P14625 803 aaKnown RBP11.26□□□□□ -0.61
NR1I3-219ENST00000504010 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-219ENST00000504010 ATP8B2P98198 1209 aa11.26□□□□□ -0.61
NR1I3-219ENST00000504010 KIF4BQ2VIQ3 1234 aa11.26□□□□□ -0.61
NR1I3-219ENST00000504010 ZBTB12Q9Y330 459 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-219ENST00000504010 TAF5LO75529 589 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 EGFRP00533 1210 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 IGHMBP2P38935 993 aaKnown RBP11.25□□□□□ -0.61
NR1I3-219ENST00000504010 GPSM2P81274 684 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 SREBF2Q12772 1141 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 MPHOSPH8Q99549 860 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 GGA3Q9NZ52 723 aa11.25□□□□□ -0.61
NR1I3-219ENST00000504010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-219ENST00000504010 LRRC37AA6NMS7 1700 aa11.24□□□□□ -0.61
NR1I3-219ENST00000504010 ALDH1A1P00352 501 aa11.24□□□□□ -0.61
NR1I3-219ENST00000504010 PTPN12Q05209 780 aaKnown RBP11.24□□□□□ -0.61
NR1I3-219ENST00000504010 LDHAL6AQ6ZMR3 332 aa11.24□□□□□ -0.61
NR1I3-219ENST00000504010 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
NR1I3-219ENST00000504010 PITPNM2Q9BZ72 1349 aa11.24□□□□□ -0.61
NR1I3-219ENST00000504010 ZNF609O15014 1411 aa11.24□□□□□ -0.61
NR1I3-219ENST00000504010 DUOX1Q9NRD9 1551 aa11.24□□□□□ -0.61
NR1I3-219ENST00000504010 DLL1O00548 723 aa11.23□□□□□ -0.61
NR1I3-219ENST00000504010 CHRNDQ07001 517 aa11.23□□□□□ -0.61
NR1I3-219ENST00000504010 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
NR1I3-219ENST00000504010 EYA3Q99504 573 aa11.23□□□□□ -0.61
NR1I3-219ENST00000504010 MINPP1Q9UNW1 487 aa11.23□□□□□ -0.61
NR1I3-219ENST00000504010 NSFL1CQ9UNZ2 370 aaKnown RBP11.23□□□□□ -0.61
NR1I3-219ENST00000504010 EXOC6BQ9Y2D4 811 aa11.23□□□□□ -0.61
NR1I3-219ENST00000504010 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
NR1I3-219ENST00000504010 SURF6O75683 361 aaKnown RBP11.22□□□□□ -0.61
NR1I3-219ENST00000504010 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
NR1I3-219ENST00000504010 KLRK1P26718 216 aa11.22□□□□□ -0.61
NR1I3-219ENST00000504010 ZNF280AP59817 542 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-219ENST00000504010 RTL9Q8NET4 1388 aa11.22□□□□□ -0.61
NR1I3-219ENST00000504010 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
NR1I3-219ENST00000504010 HDAC5Q9UQL6 1122 aa11.22□□□□□ -0.61
NR1I3-219ENST00000504010 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 C6orf229H3BNL8 230 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 ECE2O60344 883 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 IGHDP01880 384 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 NEFLP07196 543 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 OS9Q13438 667 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-219ENST00000504010 MTX1Q13505 466 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 METTL24Q5JXM2 366 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 ATG9AQ7Z3C6 839 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 SSH3Q8TE77 659 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 DBNDD1Q9H9R9 158 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 BSDC1Q9NW68 430 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-219ENST00000504010 POLLQ9UGP5 575 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 COLQQ9Y215 455 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-219ENST00000504010 RIPOR2Q9Y4F9 1068 aa11.21□□□□□ -0.61
NR1I3-219ENST00000504010 EYA2O00167 538 aa11.2□□□□□ -0.62
NR1I3-219ENST00000504010 SMARCA5O60264 1052 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-219ENST00000504010 UFL1O94874 794 aa11.2□□□□□ -0.62
NR1I3-219ENST00000504010 INHBEP58166 350 aa11.2□□□□□ -0.62
NR1I3-219ENST00000504010 TFCP2Q12800 502 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms