RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 HMGB1P09429 215 aaKnown RBP22.69■■□□□ 1.22
ARHGEF28-205ENST00000503341 ST3GAL1Q11201 340 aa22.69■■□□□ 1.22
ARHGEF28-205ENST00000503341 TTLL5Q6EMB2 1281 aa22.69■■□□□ 1.22
ARHGEF28-205ENST00000503341 ZNF804BA4D1E1 1349 aa22.68■■□□□ 1.22
ARHGEF28-205ENST00000503341 WTIPA6NIX2 430 aaPredicted RBP22.68■■□□□ 1.22
ARHGEF28-205ENST00000503341 GYS1P13807 737 aa22.68■■□□□ 1.22
ARHGEF28-205ENST00000503341 PROM2Q8N271 834 aa22.68■■□□□ 1.22
ARHGEF28-205ENST00000503341 SMC3Q9UQE7 1217 aa22.68■■□□□ 1.22
ARHGEF28-205ENST00000503341 DOCK2Q92608 1830 aa22.68■■□□□ 1.22
ARHGEF28-205ENST00000503341 E7EWF7 191 aa22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 GOLGA6L22H0YM25 854 aa22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 NPHP1O15259 732 aa22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 FGAP02671 866 aa22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 MAP3K12Q12852 859 aa22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 TXNRD1Q16881 649 aa22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 DHX32Q7L7V1 743 aaKnown RBP22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 NECAB1Q8N987 351 aa22.67■■□□□ 1.22
ARHGEF28-205ENST00000503341 TNRC6CQ9HCJ0 1690 aaKnown RBP22.66■■□□□ 1.22
ARHGEF28-205ENST00000503341 GYG1P46976 350 aa22.66■■□□□ 1.22
ARHGEF28-205ENST00000503341 Q6ZUG5 572 aa22.66■■□□□ 1.22
ARHGEF28-205ENST00000503341 CNBD1Q8NA66 436 aa22.66■■□□□ 1.22
ARHGEF28-205ENST00000503341 LAMA4Q16363 1823 aa22.66■■□□□ 1.22
ARHGEF28-205ENST00000503341 HMGB2P26583 209 aaKnown RBP22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 EXOSC10Q01780 885 aaKnown RBP22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 IMMTQ16891 758 aaKnown RBP22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 FOXD4L5Q5VV16 416 aaPredicted RBP22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 MCTP1Q6DN14 999 aa22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 MAGEB6Q8N7X4 407 aa22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 FOXD4L4Q8WXT5 416 aaPredicted RBP22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 ANKRD2Q9GZV1 360 aa22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 GNL3LQ9NVN8 582 aaKnown RBP22.65■■□□□ 1.22
ARHGEF28-205ENST00000503341 WDR33Q9C0J8 1336 aaKnown RBP22.64■■□□□ 1.22
ARHGEF28-205ENST00000503341 SKOR2Q2VWA4 1001 aaPredicted RBP22.64■■□□□ 1.21
ARHGEF28-205ENST00000503341 CAVIN4Q5BKX8 364 aa22.64■■□□□ 1.21
ARHGEF28-205ENST00000503341 PRR5LQ6MZQ0 368 aa22.64■■□□□ 1.21
ARHGEF28-205ENST00000503341 FAM84BQ96KN1 310 aaPredicted RBP22.64■■□□□ 1.21
ARHGEF28-205ENST00000503341 GJB2P29033 226 aa22.63■■□□□ 1.21
ARHGEF28-205ENST00000503341 STRBPQ96SI9 672 aaKnown RBP22.63■■□□□ 1.21
ARHGEF28-205ENST00000503341 IQSEC3Q9UPP2 1182 aaPredicted RBP22.63■■□□□ 1.21
ARHGEF28-205ENST00000503341 SYT1P21579 422 aa22.62■■□□□ 1.21
ARHGEF28-205ENST00000503341 AGXT2Q9BYV1 514 aa22.62■■□□□ 1.21
ARHGEF28-205ENST00000503341 PLSCR1O15162 318 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 SERPINB2P05120 415 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 HAND2P61296 217 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 FBXO33Q7Z6M2 555 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 AIDAQ96BJ3 306 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 LRRC2Q9BYS8 371 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 ZNF213O14771 459 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 GRAPQ13588 217 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 GRAPLQ8TC17 118 aaPredicted RBP22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 BRF1Q92994 677 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 LRP2BPQ9P2M1 347 aa22.61■■□□□ 1.21
ARHGEF28-205ENST00000503341 STX6O43752 255 aa22.6■■□□□ 1.21
ARHGEF28-205ENST00000503341 VPS37DQ86XT2 251 aa22.6■■□□□ 1.21
ARHGEF28-205ENST00000503341 LMBRD1Q9NUN5 540 aa22.6■■□□□ 1.21
ARHGEF28-205ENST00000503341 COL1A1P02452 1464 aaPredicted RBP22.6■■□□□ 1.21
ARHGEF28-205ENST00000503341 KLRK1P26718 216 aa22.59■■□□□ 1.21
ARHGEF28-205ENST00000503341 CHAMP1Q96JM3 812 aa22.59■■□□□ 1.21
ARHGEF28-205ENST00000503341 DENND2AQ9ULE3 1009 aa22.59■■□□□ 1.21
ARHGEF28-205ENST00000503341 FGD1P98174 961 aa22.59■■□□□ 1.21
ARHGEF28-205ENST00000503341 STK3Q13188 491 aa22.59■■□□□ 1.21
ARHGEF28-205ENST00000503341 ALX1Q15699 326 aa22.59■■□□□ 1.21
ARHGEF28-205ENST00000503341 SEMA3EO15041 775 aa22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 DTNBO60941 627 aa22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 MBD4O95243 580 aa22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 APPP05067 770 aa22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 ZSCAN22P10073 491 aaPredicted RBP22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 ST5P78524 1137 aa22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 FBXL16Q8N461 479 aa22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 GTF3C6Q969F1 213 aa22.58■■□□□ 1.21
ARHGEF28-205ENST00000503341 PATL2C9JE40 543 aaKnown RBP22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 APBA3O96018 575 aa22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 RXRBP28702 533 aa22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 CRY2Q49AN0 593 aa22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 GZF1Q9H116 711 aaPredicted RBP22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 DDR1Q08345 913 aa22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 NBPF3Q9H094 633 aa22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 ARMT1Q9H993 441 aa22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 ABCF2Q9UG63 623 aa22.57■■□□□ 1.2
ARHGEF28-205ENST00000503341 ZMYM6O95789 1325 aa22.56■■□□□ 1.2
ARHGEF28-205ENST00000503341 HIBADHP31937 336 aaKnown RBP22.56■■□□□ 1.2
ARHGEF28-205ENST00000503341 CHST3Q7LGC8 479 aa22.56■■□□□ 1.2
ARHGEF28-205ENST00000503341 MB21D2Q8IYB1 491 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF28-205ENST00000503341 NCOA7Q8NI08 942 aa22.56■■□□□ 1.2
ARHGEF28-205ENST00000503341 PNPLA7Q6ZV29 1317 aa22.56■■□□□ 1.2
ARHGEF28-205ENST00000503341 IRS2Q9Y4H2 1338 aa22.56■■□□□ 1.2
ARHGEF28-205ENST00000503341 POLRMTO00411 1230 aaKnown RBP22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 PFKFB2O60825 505 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 ZNF827Q17R98 1081 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 AKT1S1Q96B36 256 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 TFCP2L1Q9NZI6 479 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 PDS5AQ29RF7 1337 aaKnown RBP22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 PRPF40AO75400 957 aaKnown RBP22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 PDIA4P13667 645 aaKnown RBP22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 APOBRQ0VD83 1088 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 KLHL40Q2TBA0 621 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 IFNL3Q8IZI9 196 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 LCORLQ8N3X6 602 aa22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 RPGRQ92834 1020 aaKnown RBP22.55■■□□□ 1.2
ARHGEF28-205ENST00000503341 EPB41L4AQ9HCS5 686 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms