RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 SCAF8Q9UPN6 1271 aaKnown RBP13.63□□□□□ -0.23
SNCA-207ENST00000502987 CCDC85CA6NKD9 419 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 CSF1RP07333 972 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 KIF23Q02241 960 aaPredicted RBP13.62□□□□□ -0.23
SNCA-207ENST00000502987 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
SNCA-207ENST00000502987 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
SNCA-207ENST00000502987 TAF7LQ5H9L4 462 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 STRIP1Q5VSL9 837 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 SLC4A10Q6U841 1118 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 TXNRD3Q86VQ6 643 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 AKAP11Q9UKA4 1901 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 MYO3BQ8WXR4 1341 aa13.62□□□□□ -0.23
SNCA-207ENST00000502987 PLIN1O60240 522 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 TIE1P35590 1138 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 CASP7P55210 303 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 GTF2IP78347 998 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 CHRNDQ07001 517 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 NBPF9Q3BBW0 867 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 DACT2Q5SW24 774 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
SNCA-207ENST00000502987 C9orf78Q9NZ63 289 aaPredicted RBP13.61□□□□□ -0.23
SNCA-207ENST00000502987 HDAC9Q9UKV0 1011 aa13.61□□□□□ -0.23
SNCA-207ENST00000502987 POTEFA5A3E0 1075 aa13.6□□□□□ -0.23
SNCA-207ENST00000502987 FAM155AB1AL88 458 aaPredicted RBP13.6□□□□□ -0.23
SNCA-207ENST00000502987 TAF5LO75529 589 aa13.6□□□□□ -0.23
SNCA-207ENST00000502987 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
SNCA-207ENST00000502987 MAMSTRQ6ZN01 415 aa13.6□□□□□ -0.23
SNCA-207ENST00000502987 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
SNCA-207ENST00000502987 PITPNM2Q9BZ72 1349 aa13.6□□□□□ -0.23
SNCA-207ENST00000502987 POTEMA6NI47 508 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 TRPA1O75762 1119 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 SASH1O94885 1247 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 KLRK1P26718 216 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 NF2P35240 595 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 DGKZQ13574 1117 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 CCDC57Q2TAC2 916 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 BEND3Q5T5X7 828 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 LMBR1LQ6UX01 489 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
SNCA-207ENST00000502987 ZNF609O15014 1411 aa13.58□□□□□ -0.24
SNCA-207ENST00000502987 SNAP23O00161 211 aa13.58□□□□□ -0.24
SNCA-207ENST00000502987 WNT10BO00744 389 aa13.58□□□□□ -0.24
SNCA-207ENST00000502987 NUBP1P53384 320 aa13.58□□□□□ -0.24
SNCA-207ENST00000502987 FOXO4P98177 505 aa13.58□□□□□ -0.24
SNCA-207ENST00000502987 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
SNCA-207ENST00000502987 CD209Q9NNX6 404 aa13.58□□□□□ -0.24
SNCA-207ENST00000502987 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.58□□□□□ -0.24
SNCA-207ENST00000502987 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 GRM8O00222 908 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 SLC10A3P09131 477 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 MMP14P50281 582 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 FKBP1BP68106 108 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 PRKG1Q13976 671 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 MOB2Q70IA6 237 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 ZNF594Q96JF6 807 aaPredicted RBP13.57□□□□□ -0.24
SNCA-207ENST00000502987 CSRNP1Q96S65 589 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 SRCIN1Q9C0H9 1055 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 MCOLN1Q9GZU1 580 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 RNF186Q9NXI6 227 aa13.57□□□□□ -0.24
SNCA-207ENST00000502987 F8W031 263 aaPredicted RBP13.56□□□□□ -0.24
SNCA-207ENST00000502987 DLGAP5Q15398 846 aa13.56□□□□□ -0.24
SNCA-207ENST00000502987 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
SNCA-207ENST00000502987 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
SNCA-207ENST00000502987 ALDH1L1O75891 902 aa13.55□□□□□ -0.24
SNCA-207ENST00000502987 RBM5P52756 815 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNCA-207ENST00000502987 EPHA10Q5JZY3 1008 aa13.55□□□□□ -0.24
SNCA-207ENST00000502987 ARMC9Q7Z3E5 817 aa13.55□□□□□ -0.24
SNCA-207ENST00000502987 RASAL3Q86YV0 1011 aa13.55□□□□□ -0.24
SNCA-207ENST00000502987 APOBEC3FQ8IUX4 373 aaKnown RBP13.55□□□□□ -0.24
SNCA-207ENST00000502987 SAGE1Q9NXZ1 904 aa13.55□□□□□ -0.24
SNCA-207ENST00000502987 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
SNCA-207ENST00000502987 PAPPA2Q9BXP8 1791 aa13.55□□□□□ -0.24
SNCA-207ENST00000502987 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
SNCA-207ENST00000502987 SCUBE2Q9NQ36 999 aa13.54□□□□□ -0.24
SNCA-207ENST00000502987 JAG2Q9Y219 1238 aa13.54□□□□□ -0.24
SNCA-207ENST00000502987 ZNF646O15015 1829 aaPredicted RBP13.54□□□□□ -0.24
SNCA-207ENST00000502987 MYO1BO43795 1136 aa13.53□□□□□ -0.24
SNCA-207ENST00000502987 A0A1B0GUL6 1792 aa13.53□□□□□ -0.24
SNCA-207ENST00000502987 C15orf52Q6ZUT6 534 aaKnown RBP13.52□□□□□ -0.25
SNCA-207ENST00000502987 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
SNCA-207ENST00000502987 VEZTQ9HBM0 779 aa13.52□□□□□ -0.25
SNCA-207ENST00000502987 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.25
SNCA-207ENST00000502987 CLRN2A0PK11 232 aa13.51□□□□□ -0.25
SNCA-207ENST00000502987 IL1R1P14778 569 aa13.51□□□□□ -0.25
SNCA-207ENST00000502987 MLLT1Q03111 559 aaPredicted RBP13.51□□□□□ -0.25
SNCA-207ENST00000502987 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
SNCA-207ENST00000502987 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
SNCA-207ENST00000502987 VPS37DQ86XT2 251 aa13.51□□□□□ -0.25
SNCA-207ENST00000502987 CERS5Q8N5B7 392 aa13.51□□□□□ -0.25
SNCA-207ENST00000502987 DEFB129Q9H1M3 183 aa13.51□□□□□ -0.25
SNCA-207ENST00000502987 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
SNCA-207ENST00000502987 FRAT2O75474 233 aaPredicted RBP13.5□□□□□ -0.25
SNCA-207ENST00000502987 TBC1D8O95759 1140 aa13.5□□□□□ -0.25
SNCA-207ENST00000502987 NBPF7P0C2Y1 421 aaPredicted RBP13.5□□□□□ -0.25
SNCA-207ENST00000502987 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
SNCA-207ENST00000502987 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
SNCA-207ENST00000502987 MRPL50Q8N5N7 158 aaKnown RBP13.5□□□□□ -0.25
SNCA-207ENST00000502987 SLC10A4Q96EP9 437 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms