RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 TTLL5Q6EMB2 1281 aa21.74■■□□□ 1.07
LINC00535-201ENST00000501400 CNBD1Q8NA66 436 aa21.74■■□□□ 1.07
LINC00535-201ENST00000501400 BAG4O95429 457 aaKnown RBP21.74■■□□□ 1.07
LINC00535-201ENST00000501400 PRR5LQ6MZQ0 368 aa21.74■■□□□ 1.07
LINC00535-201ENST00000501400 ZSCAN31Q96LW9 406 aaPredicted RBP21.74■■□□□ 1.07
LINC00535-201ENST00000501400 SH2B1Q9NRF2 756 aaPredicted RBP21.74■■□□□ 1.07
LINC00535-201ENST00000501400 MYH13Q9UKX3 1938 aa21.73■■□□□ 1.07
LINC00535-201ENST00000501400 BRD1O95696 1058 aa21.72■■□□□ 1.07
LINC00535-201ENST00000501400 GYG1P46976 350 aa21.72■■□□□ 1.07
LINC00535-201ENST00000501400 CCDC83Q8IWF9 413 aa21.72■■□□□ 1.07
LINC00535-201ENST00000501400 KLRK1P26718 216 aa21.71■■□□□ 1.07
LINC00535-201ENST00000501400 DEKP35659 375 aaKnown RBP21.71■■□□□ 1.07
LINC00535-201ENST00000501400 ANKRD1Q15327 319 aa21.71■■□□□ 1.07
LINC00535-201ENST00000501400 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
LINC00535-201ENST00000501400 E7EWF7 191 aa21.7■■□□□ 1.07
LINC00535-201ENST00000501400 NPHP1O15259 732 aa21.7■■□□□ 1.07
LINC00535-201ENST00000501400 FGAP02671 866 aa21.7■■□□□ 1.07
LINC00535-201ENST00000501400 ZNF827Q17R98 1081 aa21.7■■□□□ 1.07
LINC00535-201ENST00000501400 IQSEC3Q9UPP2 1182 aaPredicted RBP21.7■■□□□ 1.06
LINC00535-201ENST00000501400 CACNA1SQ13698 1873 aa21.7■■□□□ 1.06
LINC00535-201ENST00000501400 PLSCR1O15162 318 aa21.69■■□□□ 1.06
LINC00535-201ENST00000501400 DDR1Q08345 913 aa21.69■■□□□ 1.06
LINC00535-201ENST00000501400 MAP3K12Q12852 859 aa21.69■■□□□ 1.06
LINC00535-201ENST00000501400 MAGEB6Q8N7X4 407 aa21.69■■□□□ 1.06
LINC00535-201ENST00000501400 NECAB1Q8N987 351 aa21.69■■□□□ 1.06
LINC00535-201ENST00000501400 FAM84BQ96KN1 310 aaPredicted RBP21.69■■□□□ 1.06
LINC00535-201ENST00000501400 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.69■■□□□ 1.06
LINC00535-201ENST00000501400 RGPD3A6NKT7 1758 aaPredicted RBP21.69■■□□□ 1.06
LINC00535-201ENST00000501400 RGPD4Q7Z3J3 1758 aa21.69■■□□□ 1.06
LINC00535-201ENST00000501400 IRS2Q9Y4H2 1338 aa21.68■■□□□ 1.06
LINC00535-201ENST00000501400 TRAK2O60296 914 aa21.68■■□□□ 1.06
LINC00535-201ENST00000501400 SERPINB2P05120 415 aa21.68■■□□□ 1.06
LINC00535-201ENST00000501400 GRAPQ13588 217 aa21.68■■□□□ 1.06
LINC00535-201ENST00000501400 GSE1Q14687 1217 aa21.68■■□□□ 1.06
LINC00535-201ENST00000501400 Q6ZUG5 572 aa21.68■■□□□ 1.06
LINC00535-201ENST00000501400 GRAPLQ8TC17 118 aaPredicted RBP21.68■■□□□ 1.06
LINC00535-201ENST00000501400 CTNNA3Q9UI47 895 aa21.68■■□□□ 1.06
LINC00535-201ENST00000501400 DTNBO60941 627 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 HMGB1P09429 215 aaKnown RBP21.67■■□□□ 1.06
LINC00535-201ENST00000501400 EXOSC10Q01780 885 aaKnown RBP21.67■■□□□ 1.06
LINC00535-201ENST00000501400 CRY2Q49AN0 593 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 DHX32Q7L7V1 743 aaKnown RBP21.67■■□□□ 1.06
LINC00535-201ENST00000501400 AKT1S1Q96B36 256 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 ANKRD2Q9GZV1 360 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 ANKRD31Q8N7Z5 1873 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 NRXN2Q9P2S2 1712 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 RXRBP28702 533 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 HAND2P61296 217 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 FOXD4L5Q5VV16 416 aaPredicted RBP21.67■■□□□ 1.06
LINC00535-201ENST00000501400 FBXO33Q7Z6M2 555 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 FOXD4L4Q8WXT5 416 aaPredicted RBP21.67■■□□□ 1.06
LINC00535-201ENST00000501400 CHAMP1Q96JM3 812 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 STRBPQ96SI9 672 aaKnown RBP21.67■■□□□ 1.06
LINC00535-201ENST00000501400 LRRC2Q9BYS8 371 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 SMC3Q9UQE7 1217 aa21.67■■□□□ 1.06
LINC00535-201ENST00000501400 POLRMTO00411 1230 aaKnown RBP21.66■■□□□ 1.06
LINC00535-201ENST00000501400 APBA3O96018 575 aa21.66■■□□□ 1.06
LINC00535-201ENST00000501400 IMMTQ16891 758 aaKnown RBP21.66■■□□□ 1.06
LINC00535-201ENST00000501400 CAVIN4Q5BKX8 364 aa21.66■■□□□ 1.06
LINC00535-201ENST00000501400 AGXT2Q9BYV1 514 aa21.66■■□□□ 1.06
LINC00535-201ENST00000501400 NBPF3Q9H094 633 aa21.66■■□□□ 1.06
LINC00535-201ENST00000501400 GNL3LQ9NVN8 582 aaKnown RBP21.65■■□□□ 1.06
LINC00535-201ENST00000501400 MBD4O95243 580 aa21.65■■□□□ 1.06
LINC00535-201ENST00000501400 GJB2P29033 226 aa21.65■■□□□ 1.06
LINC00535-201ENST00000501400 AIDAQ96BJ3 306 aa21.65■■□□□ 1.06
LINC00535-201ENST00000501400 RGS17Q9UGC6 210 aaPredicted RBP21.65■■□□□ 1.06
LINC00535-201ENST00000501400 TIAM2Q8IVF5 1701 aa21.64■■□□□ 1.06
LINC00535-201ENST00000501400 CHD4Q14839 1912 aa21.64■■□□□ 1.05
LINC00535-201ENST00000501400 ST5P78524 1137 aa21.64■■□□□ 1.05
LINC00535-201ENST00000501400 MCTP1Q6DN14 999 aa21.64■■□□□ 1.05
LINC00535-201ENST00000501400 BRF1Q92994 677 aa21.64■■□□□ 1.05
LINC00535-201ENST00000501400 EPB41L4AQ9HCS5 686 aaPredicted RBP21.64■■□□□ 1.05
LINC00535-201ENST00000501400 MAST2Q6P0Q8 1798 aa21.64■■□□□ 1.05
LINC00535-201ENST00000501400 SYT1P21579 422 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 LRP2BPQ9P2M1 347 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 WDR33Q9C0J8 1336 aaKnown RBP21.63■■□□□ 1.05
LINC00535-201ENST00000501400 LRRC37AA6NMS7 1700 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 ADGRA1Q86SQ6 560 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 TXNRD3Q86VQ6 643 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 GTF3C6Q969F1 213 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 ARMT1Q9H993 441 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 TFCP2L1Q9NZI6 479 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 DENND2AQ9ULE3 1009 aa21.63■■□□□ 1.05
LINC00535-201ENST00000501400 PTMSP20962 102 aa21.62■■□□□ 1.05
LINC00535-201ENST00000501400 STK3Q13188 491 aa21.62■■□□□ 1.05
LINC00535-201ENST00000501400 PDS5AQ29RF7 1337 aaKnown RBP21.62■■□□□ 1.05
LINC00535-201ENST00000501400 VPS37DQ86XT2 251 aa21.62■■□□□ 1.05
LINC00535-201ENST00000501400 COL23A1Q86Y22 540 aaPredicted RBP21.62■■□□□ 1.05
LINC00535-201ENST00000501400 TBC1D10CQ8IV04 446 aa21.62■■□□□ 1.05
LINC00535-201ENST00000501400 MB21D2Q8IYB1 491 aaPredicted RBP21.62■■□□□ 1.05
LINC00535-201ENST00000501400 LCORLQ8N3X6 602 aa21.62■■□□□ 1.05
LINC00535-201ENST00000501400 PNPLA7Q6ZV29 1317 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 GOLGA6L22H0YM25 854 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 SEMA3EO15041 775 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
LINC00535-201ENST00000501400 ZNF213O14771 459 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 STX6O43752 255 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 ALX1Q15699 326 aa21.61■■□□□ 1.05
LINC00535-201ENST00000501400 CHST3Q7LGC8 479 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms