RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 HNRNPCL2B2RXH8 293 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 HNRNPCL1O60812 293 aaKnown RBP12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 TTLL12Q14166 644 aaPredicted RBP12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 UBL4BQ8N7F7 174 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 USP6NLQ92738 828 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 SCHIP1Q9P0W5 487 aaPredicted RBP12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 LCA5Q86VQ0 697 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 UBLCP1Q8WVY7 318 aaPredicted RBP12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 TMCO4Q5TGY1 634 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 AFAP1L1Q8TED9 768 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 OPTNQ96CV9 577 aa12.54□□□□□ -0.4
AC055713.1-201ENST00000498967 BAG3O95817 575 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 CYB5RLQ6IPT4 315 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 DHX29Q7Z478 1369 aaKnown RBP12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 EVI5O60447 810 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 SKILP12757 684 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 PPP1R2P41236 205 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 VWA3BQ502W6 1294 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 ZNF830Q96NB3 372 aaPredicted RBP12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 HLA-DOAP06340 250 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 RASA3Q14644 834 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 KIF1BPQ96EK5 621 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 STAT6P42226 847 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 CHD1LQ86WJ1 897 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 ZNF213O14771 459 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 FAM13AO94988 1023 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 ATICP31939 592 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 SRGAP3O43295 1099 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 CALM1P0DP23 149 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 CALM2P0DP24 149 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 CALM3P0DP25 149 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 RFX1P22670 979 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 KMT5BQ4FZB7 885 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 NEK11Q8NG66 645 aa12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
AC055713.1-201ENST00000498967 C6orf50Q9HD87 102 aa12.52□□□□□ -0.4
AC055713.1-201ENST00000498967 STARD3NLO95772 234 aa12.52□□□□□ -0.4
AC055713.1-201ENST00000498967 NOP14P78316 857 aaKnown RBP12.52□□□□□ -0.4
AC055713.1-201ENST00000498967 KLHDC4Q8TBB5 520 aa12.52□□□□□ -0.4
AC055713.1-201ENST00000498967 TLDC2A0PJX2 215 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 MINDY4BA8MYZ0 360 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 MRPL46Q9H2W6 279 aaKnown RBP12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 ARHGAP5Q13017 1502 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 P3H4Q92791 437 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 RPL13P26373 211 aaKnown RBP12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 IFT20Q8IY31 132 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 TMTC2Q8N394 836 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 NOX5Q96PH1 765 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 SPG7Q9UQ90 795 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 RAD54L2Q9Y4B4 1467 aa12.52□□□□□ -0.41
AC055713.1-201ENST00000498967 LRRD1A4D1F6 860 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 ATP6V1AP38606 617 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 MYCBPQ99417 103 aaPredicted RBP12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 LONP1P36776 959 aaKnown RBP12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 MTHFSP49914 203 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 GABPAQ06546 454 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 CABP5Q9NP86 173 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 TTC4O95801 387 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 DIABLOQ9NR28 239 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 GNAQP50148 359 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 CABP4P57796 275 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 NBPF6Q5VWK0 638 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 NBPF4Q96M43 638 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 HMOX1P09601 288 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 RBM26Q5T8P6 1007 aaKnown RBP12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 BAZ2BQ9UIF8 2168 aaKnown RBP12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 TRIML1Q8N9V2 468 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 PDZRN3Q9UPQ7 1066 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 FAM177BA6PVY3 158 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 SYKP43405 635 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 GGNBP2Q9H3C7 697 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 MMRN2Q9H8L6 949 aa12.51□□□□□ -0.41
AC055713.1-201ENST00000498967 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 TROVE2P10155 538 aaKnown RBP eCLIP12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 PPP1R21Q6ZMI0 780 aa12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 NEK1Q96PY6 1258 aa12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 PPANQ9NQ55 473 aaKnown RBP12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 ZNF644Q9H582 1327 aaPredicted RBP12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 RNF40O75150 1001 aa12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 LDHCP07864 332 aa12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 NLRP6P59044 892 aa12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 MTMR3Q13615 1198 aa12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 CABS1Q96KC9 395 aa12.5□□□□□ -0.41
AC055713.1-201ENST00000498967 RILPQ96NA2 401 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms