RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 LDHDQ86WU2 507 aa20.68■□□□□ 0.9
PRKCB-210ENST00000498739 ERC1Q8IUD2 1116 aa20.68■□□□□ 0.9
PRKCB-210ENST00000498739 SMC1BQ8NDV3 1235 aa20.68■□□□□ 0.9
PRKCB-210ENST00000498739 XAGE2Q96GT9 111 aa20.68■□□□□ 0.9
PRKCB-210ENST00000498739 FAM205AQ6ZU69 1335 aa20.68■□□□□ 0.9
PRKCB-210ENST00000498739 USP17L8P0C7I0 530 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 PHKA1P46020 1223 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 TBC1D10BQ4KMP7 808 aaPredicted RBP20.67■□□□□ 0.9
PRKCB-210ENST00000498739 TNNI3KQ59H18 835 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 RBM26Q5T8P6 1007 aaKnown RBP20.67■□□□□ 0.9
PRKCB-210ENST00000498739 SAMD7Q7Z3H4 446 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 CERS5Q8N5B7 392 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 TRPM4Q8TD43 1214 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 GPR108Q9NPR9 543 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 GNL3LQ9NVN8 582 aaKnown RBP20.67■□□□□ 0.9
PRKCB-210ENST00000498739 FPGT-TNNI3KV9GXZ4 949 aa20.67■□□□□ 0.9
PRKCB-210ENST00000498739 APBB1O00213 710 aa20.66■□□□□ 0.9
PRKCB-210ENST00000498739 GORABQ5T7V8 394 aa20.66■□□□□ 0.9
PRKCB-210ENST00000498739 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
PRKCB-210ENST00000498739 CHADLQ6NUI6 762 aa20.66■□□□□ 0.9
PRKCB-210ENST00000498739 KIAA0825Q8IV33 1275 aa20.66■□□□□ 0.9
PRKCB-210ENST00000498739 ADAMTSL1Q8N6G6 1762 aa20.65■□□□□ 0.9
PRKCB-210ENST00000498739 FKBP1AP62942 108 aaKnown RBP20.65■□□□□ 0.9
PRKCB-210ENST00000498739 FSTL1Q12841 308 aa20.65■□□□□ 0.9
PRKCB-210ENST00000498739 KIF4BQ2VIQ3 1234 aa20.65■□□□□ 0.9
PRKCB-210ENST00000498739 MFSD14BQ5SR56 506 aa20.65■□□□□ 0.9
PRKCB-210ENST00000498739 OGFOD1Q8N543 542 aa20.65■□□□□ 0.9
PRKCB-210ENST00000498739 PCDHB15Q9Y5E8 787 aa20.65■□□□□ 0.9
PRKCB-210ENST00000498739 F8W031 263 aaPredicted RBP20.64■□□□□ 0.89
PRKCB-210ENST00000498739 EGFRP00533 1210 aa20.64■□□□□ 0.89
PRKCB-210ENST00000498739 HIRAP54198 1017 aaPredicted RBP20.64■□□□□ 0.89
PRKCB-210ENST00000498739 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.89
PRKCB-210ENST00000498739 RHPN1Q8TCX5 695 aa20.64■□□□□ 0.89
PRKCB-210ENST00000498739 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.89
PRKCB-210ENST00000498739 HDAC9Q9UKV0 1011 aa20.64■□□□□ 0.89
PRKCB-210ENST00000498739 RAB11FIP3O75154 756 aa20.63■□□□□ 0.89
PRKCB-210ENST00000498739 EXOC6Q8TAG9 804 aa20.63■□□□□ 0.89
PRKCB-210ENST00000498739 KIF1BPQ96EK5 621 aa20.63■□□□□ 0.89
PRKCB-210ENST00000498739 IL1RAPL2Q9NP60 686 aa20.63■□□□□ 0.89
PRKCB-210ENST00000498739 COL1A1P02452 1464 aaPredicted RBP20.62■□□□□ 0.89
PRKCB-210ENST00000498739 SEMA3EO15041 775 aa20.62■□□□□ 0.89
PRKCB-210ENST00000498739 MAP1SQ66K74 1059 aaPredicted RBP20.62■□□□□ 0.89
PRKCB-210ENST00000498739 TBC1D22AQ8WUA7 517 aa20.62■□□□□ 0.89
PRKCB-210ENST00000498739 DBNDD2Q9BQY9 259 aa20.62■□□□□ 0.89
PRKCB-210ENST00000498739 CCDC8Q9H0W5 538 aaPredicted RBP20.62■□□□□ 0.89
PRKCB-210ENST00000498739 DENND2AQ9ULE3 1009 aa20.62■□□□□ 0.89
PRKCB-210ENST00000498739 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
PRKCB-210ENST00000498739 EAF2Q96CJ1 260 aaPredicted RBP20.61■□□□□ 0.89
PRKCB-210ENST00000498739 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
PRKCB-210ENST00000498739 MMP14P50281 582 aa20.6■□□□□ 0.89
PRKCB-210ENST00000498739 AAMPQ13685 434 aa20.6■□□□□ 0.89
PRKCB-210ENST00000498739 RASGRF1Q13972 1273 aa20.6■□□□□ 0.89
PRKCB-210ENST00000498739 AACSQ86V21 672 aa20.6■□□□□ 0.89
PRKCB-210ENST00000498739 WDR66Q8TBY9 1149 aa20.6■□□□□ 0.89
PRKCB-210ENST00000498739 TLR7Q9NYK1 1049 aaKnown RBP20.6■□□□□ 0.89
PRKCB-210ENST00000498739 MYH13Q9UKX3 1938 aa20.59■□□□□ 0.89
PRKCB-210ENST00000498739 GRIK5Q16478 980 aa20.59■□□□□ 0.89
PRKCB-210ENST00000498739 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
PRKCB-210ENST00000498739 TTC39AQ5SRH9 613 aa20.59■□□□□ 0.89
PRKCB-210ENST00000498739 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
PRKCB-210ENST00000498739 CLASRPQ8N2M8 674 aaKnown RBP20.59■□□□□ 0.89
PRKCB-210ENST00000498739 ZC3H15Q8WU90 426 aaKnown RBP20.59■□□□□ 0.89
PRKCB-210ENST00000498739 DBNLQ9UJU6 430 aaKnown RBP20.59■□□□□ 0.89
PRKCB-210ENST00000498739 TTF2Q9UNY4 1162 aaKnown RBP20.59■□□□□ 0.89
PRKCB-210ENST00000498739 ARID4AP29374 1257 aaPredicted RBP20.58■□□□□ 0.89
PRKCB-210ENST00000498739 SCARF1Q14162 830 aa20.58■□□□□ 0.89
PRKCB-210ENST00000498739 DCTPP1Q9H773 170 aa20.58■□□□□ 0.89
PRKCB-210ENST00000498739 ZBTB22O15209 634 aa20.57■□□□□ 0.88
PRKCB-210ENST00000498739 UQCRFS1P1P0C7P4 283 aa20.57■□□□□ 0.88
PRKCB-210ENST00000498739 RBM5P52756 815 aaKnown RBP eCLIP20.57■□□□□ 0.88
PRKCB-210ENST00000498739 NBPF9Q3BBW0 867 aa20.57■□□□□ 0.88
PRKCB-210ENST00000498739 LRRCC1Q9C099 1032 aa20.57■□□□□ 0.88
PRKCB-210ENST00000498739 GGA3Q9NZ52 723 aa20.57■□□□□ 0.88
PRKCB-210ENST00000498739 PGAP2Q9UHJ9 254 aa20.57■□□□□ 0.88
PRKCB-210ENST00000498739 ASTN2O75129 1339 aaPredicted RBP20.56■□□□□ 0.88
PRKCB-210ENST00000498739 WNT10BO00744 389 aa20.56■□□□□ 0.88
PRKCB-210ENST00000498739 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
PRKCB-210ENST00000498739 CFAP100Q494V2 611 aa20.56■□□□□ 0.88
PRKCB-210ENST00000498739 DCPSQ96C86 337 aaKnown RBP20.56■□□□□ 0.88
PRKCB-210ENST00000498739 HMG20BQ9P0W2 317 aa20.56■□□□□ 0.88
PRKCB-210ENST00000498739 PDS5AQ29RF7 1337 aaKnown RBP20.55■□□□□ 0.88
PRKCB-210ENST00000498739 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
PRKCB-210ENST00000498739 ITGBL1O95965 494 aaPredicted RBP20.55■□□□□ 0.88
PRKCB-210ENST00000498739 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
PRKCB-210ENST00000498739 MCAMP43121 646 aa20.55■□□□□ 0.88
PRKCB-210ENST00000498739 ANGEL2Q5VTE6 544 aaKnown RBP20.55■□□□□ 0.88
PRKCB-210ENST00000498739 PI16Q6UXB8 463 aa20.55■□□□□ 0.88
PRKCB-210ENST00000498739 SPATA5Q8NB90 893 aa20.55■□□□□ 0.88
PRKCB-210ENST00000498739 SUGT1Q9Y2Z0 365 aa20.55■□□□□ 0.88
PRKCB-210ENST00000498739 PCDHAC2Q9Y5I4 1007 aa20.55■□□□□ 0.88
PRKCB-210ENST00000498739 SMARCA5O60264 1052 aaPredicted RBP20.54■□□□□ 0.88
PRKCB-210ENST00000498739 HSPA6P17066 643 aa20.54■□□□□ 0.88
PRKCB-210ENST00000498739 PRDX5P30044 214 aa20.54■□□□□ 0.88
PRKCB-210ENST00000498739 ZGPATQ8N5A5 531 aaKnown RBP20.54■□□□□ 0.88
PRKCB-210ENST00000498739 GLIS2Q9BZE0 524 aaPredicted RBP20.54■□□□□ 0.88
PRKCB-210ENST00000498739 ABCF2Q9UG63 623 aa20.54■□□□□ 0.88
PRKCB-210ENST00000498739 SERPINA10Q9UK55 444 aa20.54■□□□□ 0.88
PRKCB-210ENST00000498739 MAST3O60307 1309 aa20.53■□□□□ 0.88
PRKCB-210ENST00000498739 LDHBP07195 334 aaKnown RBP20.53■□□□□ 0.88
PRKCB-210ENST00000498739 CRKP46108 304 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms