RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 FKBP5Q13451 457 aaPredicted RBP20.53■□□□□ 0.88
MUC1-220ENST00000498431 DLGAP5Q15398 846 aa20.53■□□□□ 0.88
MUC1-220ENST00000498431 CCDC27Q2M243 656 aa20.53■□□□□ 0.88
MUC1-220ENST00000498431 BRCA2P51587 3418 aa20.53■□□□□ 0.88
MUC1-220ENST00000498431 F8W031 263 aaPredicted RBP20.52■□□□□ 0.88
MUC1-220ENST00000498431 LINS1Q8NG48 757 aa20.52■□□□□ 0.88
MUC1-220ENST00000498431 MYH16Q9H6N6 1097 aa20.52■□□□□ 0.88
MUC1-220ENST00000498431 LAMB1P07942 1786 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 CLRN2A0PK11 232 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 ANKRD18BA2A2Z9 1011 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 FOXO4P98177 505 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 MAP3K11Q16584 847 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 IFNL1Q8IU54 200 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 MTMR14Q8NCE2 650 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 SLC10A4Q96EP9 437 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 JAG2Q9Y219 1238 aa20.51■□□□□ 0.87
MUC1-220ENST00000498431 IGF2BP3O00425 579 aaKnown RBP eCLIP20.5■□□□□ 0.87
MUC1-220ENST00000498431 CFAP100Q494V2 611 aa20.5■□□□□ 0.87
MUC1-220ENST00000498431 C15orf52Q6ZUT6 534 aaKnown RBP20.5■□□□□ 0.87
MUC1-220ENST00000498431 WNK4Q96J92 1243 aa20.5■□□□□ 0.87
MUC1-220ENST00000498431 FANCIQ9NVI1 1328 aa20.5■□□□□ 0.87
MUC1-220ENST00000498431 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
MUC1-220ENST00000498431 MANSC4A6NHS7 340 aaPredicted RBP20.49■□□□□ 0.87
MUC1-220ENST00000498431 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
MUC1-220ENST00000498431 IL1R1P14778 569 aa20.49■□□□□ 0.87
MUC1-220ENST00000498431 PRMT6Q96LA8 375 aaPredicted RBP20.49■□□□□ 0.87
MUC1-220ENST00000498431 IL16Q14005 1332 aa20.49■□□□□ 0.87
MUC1-220ENST00000498431 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
MUC1-220ENST00000498431 F6X3S4 739 aa20.48■□□□□ 0.87
MUC1-220ENST00000498431 ALDH1A1P00352 501 aa20.48■□□□□ 0.87
MUC1-220ENST00000498431 GJA5P36382 358 aa20.48■□□□□ 0.87
MUC1-220ENST00000498431 IFIT5Q13325 482 aaKnown RBP20.48■□□□□ 0.87
MUC1-220ENST00000498431 EPHA10Q5JZY3 1008 aa20.48■□□□□ 0.87
MUC1-220ENST00000498431 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
MUC1-220ENST00000498431 CHMP3Q9Y3E7 222 aa20.48■□□□□ 0.87
MUC1-220ENST00000498431 PPP1R12BO60237 982 aaPredicted RBP20.47■□□□□ 0.87
MUC1-220ENST00000498431 ZBTB48P10074 688 aaPredicted RBP20.47■□□□□ 0.87
MUC1-220ENST00000498431 OTOP1Q7RTM1 612 aa20.47■□□□□ 0.87
MUC1-220ENST00000498431 ZNF804AQ7Z570 1209 aa20.47■□□□□ 0.87
MUC1-220ENST00000498431 ZNF594Q96JF6 807 aaPredicted RBP20.47■□□□□ 0.87
MUC1-220ENST00000498431 VEZTQ9HBM0 779 aa20.47■□□□□ 0.87
MUC1-220ENST00000498431 TRIM17Q9Y577 477 aa20.47■□□□□ 0.87
MUC1-220ENST00000498431 PPP2R3BQ9Y5P8 575 aa20.47■□□□□ 0.87
MUC1-220ENST00000498431 VAMP4O75379 141 aa20.46■□□□□ 0.87
MUC1-220ENST00000498431 INHBEP58166 350 aa20.46■□□□□ 0.87
MUC1-220ENST00000498431 BEND3Q5T5X7 828 aa20.46■□□□□ 0.87
MUC1-220ENST00000498431 OTOFQ9HC10 1997 aa20.46■□□□□ 0.87
MUC1-220ENST00000498431 PLIN1O60240 522 aa20.45■□□□□ 0.86
MUC1-220ENST00000498431 USP2O75604 605 aaPredicted RBP20.45■□□□□ 0.86
MUC1-220ENST00000498431 FKBP1AP62942 108 aaKnown RBP20.45■□□□□ 0.86
MUC1-220ENST00000498431 LMBR1LQ6UX01 489 aa20.45■□□□□ 0.86
MUC1-220ENST00000498431 POTEFA5A3E0 1075 aa20.44■□□□□ 0.86
MUC1-220ENST00000498431 MYO1BO43795 1136 aa20.44■□□□□ 0.86
MUC1-220ENST00000498431 CAP1Q01518 475 aa20.44■□□□□ 0.86
MUC1-220ENST00000498431 RASA3Q14644 834 aa20.44■□□□□ 0.86
MUC1-220ENST00000498431 SUPT20HL1Q3ZLR7 823 aa20.44■□□□□ 0.86
MUC1-220ENST00000498431 RBM5P52756 815 aaKnown RBP eCLIP20.43■□□□□ 0.86
MUC1-220ENST00000498431 EXOSC9Q06265 439 aaKnown RBP20.43■□□□□ 0.86
MUC1-220ENST00000498431 CRHR2Q13324 411 aa20.43■□□□□ 0.86
MUC1-220ENST00000498431 CD99L2Q8TCZ2 262 aa20.43■□□□□ 0.86
MUC1-220ENST00000498431 PTPN18Q99952 460 aa20.43■□□□□ 0.86
MUC1-220ENST00000498431 SALL2Q9Y467 1007 aaPredicted RBP20.43■□□□□ 0.86
MUC1-220ENST00000498431 IREB2P48200 963 aaKnown RBP20.42■□□□□ 0.86
MUC1-220ENST00000498431 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
MUC1-220ENST00000498431 CDAN1Q8IWY9 1227 aa20.42■□□□□ 0.86
MUC1-220ENST00000498431 UNCXA6NJT0 531 aa20.41■□□□□ 0.86
MUC1-220ENST00000498431 FAM205AQ6ZU69 1335 aa20.41■□□□□ 0.86
MUC1-220ENST00000498431 GRM8O00222 908 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 GYG1P46976 350 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 CCDC57Q2TAC2 916 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 SPDYE2Q495Y8 402 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 ANKRD13AQ8IZ07 590 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 ARAP2Q8WZ64 1704 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 ELP3Q9H9T3 547 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 SPINK5Q9NQ38 1064 aaPredicted RBP20.4■□□□□ 0.86
MUC1-220ENST00000498431 CNNM1Q9NRU3 951 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 ZNF70Q9UC06 446 aaPredicted RBP20.4■□□□□ 0.86
MUC1-220ENST00000498431 PTPN22Q9Y2R2 807 aa20.4■□□□□ 0.86
MUC1-220ENST00000498431 RBBP6Q7Z6E9 1792 aaKnown RBP20.39■□□□□ 0.86
MUC1-220ENST00000498431 NCBP3Q53F19 620 aaKnown RBP20.39■□□□□ 0.85
MUC1-220ENST00000498431 TAF7LQ5H9L4 462 aa20.39■□□□□ 0.85
MUC1-220ENST00000498431 MFSD14BQ5SR56 506 aa20.39■□□□□ 0.85
MUC1-220ENST00000498431 TDRD7Q8NHU6 1098 aaKnown RBP20.39■□□□□ 0.85
MUC1-220ENST00000498431 CNKSR2Q8WXI2 1034 aa20.39■□□□□ 0.85
MUC1-220ENST00000498431 ERO1AQ96HE7 468 aa20.39■□□□□ 0.85
MUC1-220ENST00000498431 TDRD3Q9H7E2 651 aaKnown RBP20.39■□□□□ 0.85
MUC1-220ENST00000498431 TTF2Q9UNY4 1162 aaKnown RBP20.39■□□□□ 0.85
MUC1-220ENST00000498431 TESPA1A2RU30 521 aaPredicted RBP20.38■□□□□ 0.85
MUC1-220ENST00000498431 OPTNQ96CV9 577 aa20.38■□□□□ 0.85
MUC1-220ENST00000498431 MS4A4AQ96JQ5 239 aa20.38■□□□□ 0.85
MUC1-220ENST00000498431 TEPSINQ96N21 525 aa20.38■□□□□ 0.85
MUC1-220ENST00000498431 PUS3Q9BZE2 481 aaKnown RBP20.38■□□□□ 0.85
MUC1-220ENST00000498431 KIAA0100Q14667 2235 aaKnown RBP20.38■□□□□ 0.85
MUC1-220ENST00000498431 GRIK5Q16478 980 aa20.37■□□□□ 0.85
MUC1-220ENST00000498431 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
MUC1-220ENST00000498431 OTUD7BQ6GQQ9 843 aa20.37■□□□□ 0.85
MUC1-220ENST00000498431 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.37■□□□□ 0.85
MUC1-220ENST00000498431 WDR63Q8IWG1 891 aa20.37■□□□□ 0.85
MUC1-220ENST00000498431 FAM84BQ96KN1 310 aaPredicted RBP20.37■□□□□ 0.85
MUC1-220ENST00000498431 EFCC1Q9HA90 598 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms