RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 J3QW42 95 aa5.51□□□□□ -1.53
CALD1-224ENST00000498254 ZNF157P51786 506 aaPredicted RBP5.51□□□□□ -1.53
CALD1-224ENST00000498254 PLAURQ03405 335 aa5.51□□□□□ -1.53
CALD1-224ENST00000498254 UBAP2LQ14157 1087 aaKnown RBP5.51□□□□□ -1.53
CALD1-224ENST00000498254 LBRQ14739 615 aaKnown RBP5.51□□□□□ -1.53
CALD1-224ENST00000498254 PRPF40BQ6NWY9 871 aaKnown RBP5.51□□□□□ -1.53
CALD1-224ENST00000498254 DHX32Q7L7V1 743 aaKnown RBP5.51□□□□□ -1.53
CALD1-224ENST00000498254 GTPBP3Q969Y2 492 aaKnown RBP5.51□□□□□ -1.53
CALD1-224ENST00000498254 C11orf16Q9NQ32 467 aa5.51□□□□□ -1.53
CALD1-224ENST00000498254 CNTNAP5Q8WYK1 1306 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 GPR25O00155 361 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 ITGB2P05107 769 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 SSBP05455 408 aaKnown RBP eCLIP5.5□□□□□ -1.53
CALD1-224ENST00000498254 EIF4A3P38919 411 aaKnown RBP5.5□□□□□ -1.53
CALD1-224ENST00000498254 NASPP49321 788 aaPredicted RBP5.5□□□□□ -1.53
CALD1-224ENST00000498254 ATP11AP98196 1134 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 CCNJLQ8IV13 435 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 SPACA7Q96KW9 195 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 TMEM74Q96NL1 305 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 RSRP1Q9BUV0 290 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 PIF1Q9H611 641 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 ZSWIM4Q9H7M6 989 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 DZANK1Q9NVP4 752 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 GPN3Q9UHW5 284 aaPredicted RBP5.5□□□□□ -1.53
CALD1-224ENST00000498254 EFR3BQ9Y2G0 817 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 MRVI1Q9Y6F6 885 aa5.5□□□□□ -1.53
CALD1-224ENST00000498254 H7C1W4 665 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 KIF4AO95239 1232 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 PF4P02776 101 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 LIG3P49916 1009 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 PWP1Q13610 501 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 BMS1Q14692 1282 aaKnown RBP5.49□□□□□ -1.53
CALD1-224ENST00000498254 PODNQ7Z5L7 613 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 TRIM22Q8IYM9 498 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 CEP120Q8N960 986 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 ZNF296Q8WUU4 475 aaPredicted RBP5.49□□□□□ -1.53
CALD1-224ENST00000498254 ZNF837Q96EG3 531 aaPredicted RBP5.49□□□□□ -1.53
CALD1-224ENST00000498254 GMCL1Q96IK5 515 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 EAF1Q96JC9 268 aaPredicted RBP5.49□□□□□ -1.53
CALD1-224ENST00000498254 RASSF4Q9H2L5 321 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 MBIPQ9NS73 344 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 NDFIP2Q9NV92 336 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 PPM1HQ9ULR3 514 aa5.49□□□□□ -1.53
CALD1-224ENST00000498254 A0A096LPE4 126 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 A0A1W2PPZ6 126 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 PAGE1O75459 146 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 BCRP11274 1271 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 XRCC5P13010 732 aaKnown RBP5.48□□□□□ -1.53
CALD1-224ENST00000498254 EIF2AK2P19525 551 aaKnown RBP5.48□□□□□ -1.53
CALD1-224ENST00000498254 FGFR3P22607 806 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 SOX18P35713 384 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 SNAP47Q5SQN1 464 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 FBXL19Q6PCT2 694 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 FOXR1Q6PIV2 292 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 SV2BQ7L1I2 683 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 GOLM1Q8NBJ4 401 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 PHC3Q8NDX5 983 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 ARMC5Q96C12 935 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 PUS7Q96PZ0 661 aaKnown RBP5.48□□□□□ -1.53
CALD1-224ENST00000498254 HIRIP3Q9BW71 556 aaPredicted RBP5.48□□□□□ -1.53
CALD1-224ENST00000498254 UBE2OQ9C0C9 1292 aaKnown RBP5.48□□□□□ -1.53
CALD1-224ENST00000498254 GINM1Q9NU53 330 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 UBP1Q9NZI7 540 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 PRR12Q9ULL5 1215 aa5.48□□□□□ -1.53
CALD1-224ENST00000498254 IGF1RP08069 1367 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 LOC102724428A0A0B4J2F2 783 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 ZBTB42B2RXF5 422 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 PDE2AO00408 941 aaPredicted RBP5.47□□□□□ -1.53
CALD1-224ENST00000498254 ENC1O14682 589 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 TLR3O15455 904 aaKnown RBP5.47□□□□□ -1.53
CALD1-224ENST00000498254 MAP3K6O95382 1288 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 GHRHP01286 108 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 HSP90B1P14625 803 aaKnown RBP5.47□□□□□ -1.53
CALD1-224ENST00000498254 SIK1P57059 783 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 CTBSQ01459 385 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 FAAP100Q0VG06 881 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 TTBK2Q6IQ55 1244 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 NEDD1Q8NHV4 660 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 RASGRP4Q8TDF6 673 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 RHOVQ96L33 236 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 MUC3BQ9H195 1237 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 OSBPL2Q9H1P3 480 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 ZNF408Q9H9D4 720 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 SEC31BQ9NQW1 1179 aa5.47□□□□□ -1.53
CALD1-224ENST00000498254 ATXN7L1Q9ULK2 861 aaPredicted RBP5.47□□□□□ -1.53
CALD1-224ENST00000498254 NFKBIEO00221 500 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 CPB1P15086 417 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 TFE3P19532 575 aaPredicted RBP5.46□□□□□ -1.54
CALD1-224ENST00000498254 BAG6P46379 1132 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 NRLP54845 237 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 GPLD1P80108 840 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 RBL2Q08999 1139 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 CAMK2GQ13555 558 aaPredicted RBP5.46□□□□□ -1.54
CALD1-224ENST00000498254 NEUROD1Q13562 356 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 PCNX4Q63HM2 1172 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 CEP135Q66GS9 1140 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 CCDC81Q6ZN84 652 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 SYT9Q86SS6 491 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 CKAP2LQ8IYA6 745 aa5.46□□□□□ -1.54
CALD1-224ENST00000498254 CPLX3Q8WVH0 158 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms