RNA–Protein interactions for RNA: ENST00000498044.6

CBWD1-218, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-218ENST00000498044 SOX13Q9UN79 622 aa8.18□□□□□ -1.1
CBWD1-218ENST00000498044 ZNF576Q9H609 170 aa8.17□□□□□ -1.1
CBWD1-218ENST00000498044 SH2B1Q9NRF2 756 aaPredicted RBP8.17□□□□□ -1.1
CBWD1-218ENST00000498044 TTF2Q9UNY4 1162 aaKnown RBP8.17□□□□□ -1.1
CBWD1-218ENST00000498044 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
CBWD1-218ENST00000498044 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
CBWD1-218ENST00000498044 LDLRAD1Q5T700 205 aa8.16□□□□□ -1.1
CBWD1-218ENST00000498044 MEI1Q5TIA1 1274 aa8.16□□□□□ -1.1
CBWD1-218ENST00000498044 MSL1Q68DK7 614 aa8.16□□□□□ -1.1
CBWD1-218ENST00000498044 FAM117BQ6P1L5 589 aa8.16□□□□□ -1.1
CBWD1-218ENST00000498044 C8orf86Q6ZUL3 223 aa8.16□□□□□ -1.1
CBWD1-218ENST00000498044 VN1R5Q7Z5H4 357 aa8.16□□□□□ -1.1
CBWD1-218ENST00000498044 CEP44Q9C0F1 390 aa8.16□□□□□ -1.1
CBWD1-218ENST00000498044 METTL5Q9NRN9 209 aaKnown RBP8.16□□□□□ -1.1
CBWD1-218ENST00000498044 EIF4EBP3O60516 100 aaPredicted RBP8.15□□□□□ -1.1
CBWD1-218ENST00000498044 ARHGEF15O94989 841 aa8.15□□□□□ -1.1
CBWD1-218ENST00000498044 TCF3P15923 654 aa8.15□□□□□ -1.1
CBWD1-218ENST00000498044 BAG6P46379 1132 aa8.15□□□□□ -1.1
CBWD1-218ENST00000498044 DGKGP49619 791 aa8.15□□□□□ -1.1
CBWD1-218ENST00000498044 PCDH1Q08174 1060 aa8.15□□□□□ -1.1
CBWD1-218ENST00000498044 IKBKEQ14164 716 aa8.15□□□□□ -1.1
CBWD1-218ENST00000498044 ADAMTSL4Q6UY14 1074 aa8.15□□□□□ -1.1
CBWD1-218ENST00000498044 H3BRJ5 948 aa8.14□□□□□ -1.11
CBWD1-218ENST00000498044 PIK3R2O00459 728 aa8.14□□□□□ -1.11
CBWD1-218ENST00000498044 ZNF76P36508 570 aa8.14□□□□□ -1.11
CBWD1-218ENST00000498044 PPP2R3AQ06190 1150 aa8.14□□□□□ -1.11
CBWD1-218ENST00000498044 SV2BQ7L1I2 683 aa8.14□□□□□ -1.11
CBWD1-218ENST00000498044 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
CBWD1-218ENST00000498044 DDX54Q8TDD1 881 aaKnown RBP8.14□□□□□ -1.11
CBWD1-218ENST00000498044 ESRRAP11474 423 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-218ENST00000498044 NID1P14543 1247 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 EPHA1P21709 976 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 ARL4DP49703 201 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 INSM1Q01101 510 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-218ENST00000498044 CCDC85BQ15834 202 aaPredicted RBP8.13□□□□□ -1.11
CBWD1-218ENST00000498044 TPTE2Q6XPS3 522 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 WNT8BQ93098 351 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 RNF34Q969K3 372 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
CBWD1-218ENST00000498044 SEC31BQ9NQW1 1179 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 TMEM39AQ9NV64 488 aa8.13□□□□□ -1.11
CBWD1-218ENST00000498044 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 B3GALT4O96024 378 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 HOXB4P17483 251 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-218ENST00000498044 CDC25BP30305 580 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 FANCCQ00597 558 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 COL9A3Q14050 684 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-218ENST00000498044 ZNF423Q2M1K9 1284 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 MAP4K3Q8IVH8 894 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 DMRTC2Q8IXT2 367 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-218ENST00000498044 SRA1Q9HD15 236 aaKnown RBP8.12□□□□□ -1.11
CBWD1-218ENST00000498044 IGSF5Q9NSI5 407 aa8.12□□□□□ -1.11
CBWD1-218ENST00000498044 GPN3Q9UHW5 284 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-218ENST00000498044 SPDYE3A6NKU9 549 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 SOX1O00570 391 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-218ENST00000498044 RLBP1P12271 317 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 FAAP100Q0VG06 881 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 TRAPPC3LQ5T215 181 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 DTWD1Q8N5C7 304 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 NECAB3Q96P71 396 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-218ENST00000498044 SOX17Q9H6I2 414 aaPredicted RBP8.11□□□□□ -1.11
CBWD1-218ENST00000498044 OSGEPQ9NPF4 335 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 MKL2Q9ULH7 1088 aa8.11□□□□□ -1.11
CBWD1-218ENST00000498044 FSCN2O14926 492 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 FBXO24O75426 580 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 C19orf57Q0VDD7 668 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 LINC00114Q6XXX2 140 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 ILDR2Q71H61 639 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 PODNQ7Z5L7 613 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 DCAF11Q8TEB1 546 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 SAMM50Q9Y512 469 aa8.1□□□□□ -1.11
CBWD1-218ENST00000498044 GNB5O14775 395 aa8.09□□□□□ -1.11
CBWD1-218ENST00000498044 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
CBWD1-218ENST00000498044 ZNF157P51786 506 aaPredicted RBP8.09□□□□□ -1.11
CBWD1-218ENST00000498044 RAC1P63000 192 aa8.09□□□□□ -1.11
CBWD1-218ENST00000498044 SNRPNP63162 240 aaKnown RBP8.09□□□□□ -1.11
CBWD1-218ENST00000498044 HDLBPQ00341 1268 aaKnown RBP8.09□□□□□ -1.11
CBWD1-218ENST00000498044 TXNDC11Q6PKC3 985 aa8.09□□□□□ -1.11
CBWD1-218ENST00000498044 BEND7Q8N7W2 519 aaPredicted RBP8.09□□□□□ -1.11
CBWD1-218ENST00000498044 ENC1O14682 589 aa8.08□□□□□ -1.12
CBWD1-218ENST00000498044 PWP1Q13610 501 aa8.08□□□□□ -1.12
CBWD1-218ENST00000498044 RELL1Q8IUW5 271 aa8.08□□□□□ -1.12
CBWD1-218ENST00000498044 RSRP1Q9BUV0 290 aa8.08□□□□□ -1.12
CBWD1-218ENST00000498044 PLVAPQ9BX97 442 aa8.08□□□□□ -1.12
CBWD1-218ENST00000498044 CELA3AP09093 270 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 GSTM4Q03013 218 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 AP3B2Q13367 1082 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 SETDB1Q15047 1291 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 C9orf131Q5VYM1 1079 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 METTL16Q86W50 562 aaKnown RBP8.07□□□□□ -1.12
CBWD1-218ENST00000498044 NT5DC4Q86YG4 428 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 TRIM11Q96F44 468 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 NOP53Q9NZM5 478 aaKnown RBP8.07□□□□□ -1.12
CBWD1-218ENST00000498044 ADAMTS8Q9UP79 889 aa8.07□□□□□ -1.12
CBWD1-218ENST00000498044 CYP11A1P05108 521 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms