RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 SLC10A4Q96EP9 437 aa27.74■■■□□ 2.03
CLIC4-204ENST00000497755 IL1R1P14778 569 aa27.73■■■□□ 2.03
CLIC4-204ENST00000497755 IFIT5Q13325 482 aaKnown RBP27.73■■■□□ 2.03
CLIC4-204ENST00000497755 NCBP3Q53F19 620 aaKnown RBP27.73■■■□□ 2.03
CLIC4-204ENST00000497755 FANCIQ9NVI1 1328 aa27.72■■■□□ 2.03
CLIC4-204ENST00000497755 COL1A1P02452 1464 aaPredicted RBP27.72■■■□□ 2.03
CLIC4-204ENST00000497755 PCDH10Q9P2E7 1040 aa27.72■■■□□ 2.03
CLIC4-204ENST00000497755 ALDH1A1P00352 501 aa27.71■■■□□ 2.03
CLIC4-204ENST00000497755 INHBEP58166 350 aa27.71■■■□□ 2.03
CLIC4-204ENST00000497755 PRPF38BQ5VTL8 546 aaKnown RBP27.71■■■□□ 2.03
CLIC4-204ENST00000497755 CLMNQ96JQ2 1002 aa27.71■■■□□ 2.03
CLIC4-204ENST00000497755 PRMT6Q96LA8 375 aaPredicted RBP27.71■■■□□ 2.03
CLIC4-204ENST00000497755 MANSC4A6NHS7 340 aaPredicted RBP27.7■■■□□ 2.02
CLIC4-204ENST00000497755 F8W031 263 aaPredicted RBP27.7■■■□□ 2.02
CLIC4-204ENST00000497755 CFAP100Q494V2 611 aa27.7■■■□□ 2.02
CLIC4-204ENST00000497755 IFNL1Q8IU54 200 aa27.7■■■□□ 2.02
CLIC4-204ENST00000497755 PPP2R3BQ9Y5P8 575 aa27.7■■■□□ 2.02
CLIC4-204ENST00000497755 SPDYE2BA6NHP3 402 aa27.69■■■□□ 2.02
CLIC4-204ENST00000497755 F6X3S4 739 aa27.69■■■□□ 2.02
CLIC4-204ENST00000497755 PPP1R12BO60237 982 aaPredicted RBP27.69■■■□□ 2.02
CLIC4-204ENST00000497755 SPDYE6P0CI01 402 aa27.69■■■□□ 2.02
CLIC4-204ENST00000497755 FKBP1AP62942 108 aaKnown RBP27.69■■■□□ 2.02
CLIC4-204ENST00000497755 BEND3Q5T5X7 828 aa27.69■■■□□ 2.02
CLIC4-204ENST00000497755 ZNF804AQ7Z570 1209 aa27.69■■■□□ 2.02
CLIC4-204ENST00000497755 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.69■■■□□ 2.02
CLIC4-204ENST00000497755 SSC5DA1L4H1 1573 aa27.69■■■□□ 2.02
CLIC4-204ENST00000497755 AOX1Q06278 1338 aa27.68■■■□□ 2.02
CLIC4-204ENST00000497755 CLRN2A0PK11 232 aa27.68■■■□□ 2.02
CLIC4-204ENST00000497755 EPHA10Q5JZY3 1008 aa27.68■■■□□ 2.02
CLIC4-204ENST00000497755 LMBR1LQ6UX01 489 aa27.68■■■□□ 2.02
CLIC4-204ENST00000497755 WNK4Q96J92 1243 aa27.68■■■□□ 2.02
CLIC4-204ENST00000497755 JAG2Q9Y219 1238 aa27.68■■■□□ 2.02
CLIC4-204ENST00000497755 CHMP3Q9Y3E7 222 aa27.68■■■□□ 2.02
CLIC4-204ENST00000497755 HTTP42858 3142 aa27.67■■■□□ 2.02
CLIC4-204ENST00000497755 ZBTB48P10074 688 aaPredicted RBP27.67■■■□□ 2.02
CLIC4-204ENST00000497755 EXOSC9Q06265 439 aaKnown RBP27.67■■■□□ 2.02
CLIC4-204ENST00000497755 SUPT20HL1Q3ZLR7 823 aa27.67■■■□□ 2.02
CLIC4-204ENST00000497755 NBPF12Q5TAG4 269 aaPredicted RBP27.67■■■□□ 2.02
CLIC4-204ENST00000497755 ZNF594Q96JF6 807 aaPredicted RBP27.67■■■□□ 2.02
CLIC4-204ENST00000497755 ECM29Q5VYK3 1845 aa27.67■■■□□ 2.02
CLIC4-204ENST00000497755 A0A1B0GUL6 1792 aa27.66■■■□□ 2.02
CLIC4-204ENST00000497755 UNCXA6NJT0 531 aa27.66■■■□□ 2.02
CLIC4-204ENST00000497755 IGF2BP3O00425 579 aaKnown RBP eCLIP27.66■■■□□ 2.02
CLIC4-204ENST00000497755 MYO1BO43795 1136 aa27.66■■■□□ 2.02
CLIC4-204ENST00000497755 CENPFP49454 3210 aa27.65■■■□□ 2.02
CLIC4-204ENST00000497755 USP2O75604 605 aaPredicted RBP27.65■■■□□ 2.02
CLIC4-204ENST00000497755 LDHAL6AQ6ZMR3 332 aa27.65■■■□□ 2.02
CLIC4-204ENST00000497755 WDR63Q8IWG1 891 aa27.65■■■□□ 2.02
CLIC4-204ENST00000497755 MKI67P46013 3256 aaKnown RBP27.65■■■□□ 2.02
CLIC4-204ENST00000497755 PLIN1O60240 522 aa27.64■■■□□ 2.02
CLIC4-204ENST00000497755 CCDC57Q2TAC2 916 aa27.64■■■□□ 2.02
CLIC4-204ENST00000497755 VEZTQ9HBM0 779 aa27.64■■■□□ 2.02
CLIC4-204ENST00000497755 SALL2Q9Y467 1007 aaPredicted RBP27.64■■■□□ 2.02
CLIC4-204ENST00000497755 RASA3Q14644 834 aa27.63■■■□□ 2.01
CLIC4-204ENST00000497755 TRIM17Q9Y577 477 aa27.63■■■□□ 2.01
CLIC4-204ENST00000497755 GRM8O00222 908 aa27.62■■■□□ 2.01
CLIC4-204ENST00000497755 GJA5P36382 358 aa27.62■■■□□ 2.01
CLIC4-204ENST00000497755 RBM5P52756 815 aaKnown RBP eCLIP27.62■■■□□ 2.01
CLIC4-204ENST00000497755 OTOP1Q7RTM1 612 aa27.62■■■□□ 2.01
CLIC4-204ENST00000497755 FAM205AQ6ZU69 1335 aa27.62■■■□□ 2.01
CLIC4-204ENST00000497755 IREB2P48200 963 aaKnown RBP27.61■■■□□ 2.01
CLIC4-204ENST00000497755 CNNM1Q9NRU3 951 aa27.61■■■□□ 2.01
CLIC4-204ENST00000497755 TAF7LQ5H9L4 462 aa27.6■■■□□ 2.01
CLIC4-204ENST00000497755 TDRD7Q8NHU6 1098 aaKnown RBP27.6■■■□□ 2.01
CLIC4-204ENST00000497755 SPINK5Q9NQ38 1064 aaPredicted RBP27.6■■■□□ 2.01
CLIC4-204ENST00000497755 LAMB1P07942 1786 aa27.6■■■□□ 2.01
CLIC4-204ENST00000497755 ANKRD13AQ8IZ07 590 aa27.59■■■□□ 2.01
CLIC4-204ENST00000497755 PTPN18Q99952 460 aa27.59■■■□□ 2.01
CLIC4-204ENST00000497755 KIAA0100Q14667 2235 aaKnown RBP27.59■■■□□ 2.01
CLIC4-204ENST00000497755 ZNF70Q9UC06 446 aaPredicted RBP27.58■■■□□ 2.01
CLIC4-204ENST00000497755 TESPA1A2RU30 521 aaPredicted RBP27.57■■■□□ 2
CLIC4-204ENST00000497755 GYG1P46976 350 aa27.57■■■□□ 2
CLIC4-204ENST00000497755 CRHR2Q13324 411 aa27.57■■■□□ 2
CLIC4-204ENST00000497755 UBE4AQ14139 1066 aa27.57■■■□□ 2
CLIC4-204ENST00000497755 SPDYE2Q495Y8 402 aa27.57■■■□□ 2
CLIC4-204ENST00000497755 MFSD14BQ5SR56 506 aa27.57■■■□□ 2
CLIC4-204ENST00000497755 FAM84BQ96KN1 310 aaPredicted RBP27.57■■■□□ 2
CLIC4-204ENST00000497755 MRS2Q9HD23 443 aa27.57■■■□□ 2
CLIC4-204ENST00000497755 C9orf78Q9NZ63 289 aaPredicted RBP27.57■■■□□ 2
CLIC4-204ENST00000497755 SERPINA10Q9UK55 444 aa27.57■■■□□ 2
CLIC4-204ENST00000497755 HIBADHP31937 336 aaKnown RBP27.56■■■□□ 2
CLIC4-204ENST00000497755 OTUD7BQ6GQQ9 843 aa27.56■■■□□ 2
CLIC4-204ENST00000497755 PUS3Q9BZE2 481 aaKnown RBP27.56■■■□□ 2
CLIC4-204ENST00000497755 TDRD3Q9H7E2 651 aaKnown RBP27.56■■■□□ 2
CLIC4-204ENST00000497755 TTF2Q9UNY4 1162 aaKnown RBP27.56■■■□□ 2
CLIC4-204ENST00000497755 BRCA2P51587 3418 aa27.55■■■□□ 2
CLIC4-204ENST00000497755 INTS3Q68E01 1043 aaKnown RBP27.55■■■□□ 2
CLIC4-204ENST00000497755 ERO1AQ96HE7 468 aa27.55■■■□□ 2
CLIC4-204ENST00000497755 KAZALD1Q96I82 304 aa27.55■■■□□ 2
CLIC4-204ENST00000497755 PTPN22Q9Y2R2 807 aa27.55■■■□□ 2
CLIC4-204ENST00000497755 POTEFA5A3E0 1075 aa27.54■■■□□ 2
CLIC4-204ENST00000497755 ALDH1L1O75891 902 aa27.54■■■□□ 2
CLIC4-204ENST00000497755 TNFAIP1Q13829 316 aa27.54■■■□□ 2
CLIC4-204ENST00000497755 CDAN1Q8IWY9 1227 aa27.54■■■□□ 2
CLIC4-204ENST00000497755 CD99L2Q8TCZ2 262 aa27.54■■■□□ 2
CLIC4-204ENST00000497755 TEPSINQ96N21 525 aa27.54■■■□□ 2
CLIC4-204ENST00000497755 CAP1Q01518 475 aa27.53■■■□□ 2
CLIC4-204ENST00000497755 DZIP1LQ8IYY4 767 aaKnown RBP27.53■■■□□ 2
CLIC4-204ENST00000497755 OPTNQ96CV9 577 aa27.53■■■□□ 2
CLIC4-204ENST00000497755 MS4A4AQ96JQ5 239 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms