RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 RNF187Q5TA31 235 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 RCOR1Q9UKL0 485 aa12.18□□□□□ -0.46
TRAPPC12-223ENST00000497597 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 FRMD3A2A2Y4 597 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 VWA3AA6NCI4 1184 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 ARHGAP6O43182 974 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 MRPS25P82663 173 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 TRIM65Q6PJ69 517 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 RBM43Q6ZSC3 357 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 SPHKAPQ2M3C7 1700 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 TULP4Q9NRJ4 1543 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 TTC41PQ6P2S7 1318 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 COL3A1P02461 1466 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 CTAGE15A4D2H0 777 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 ATP2C2O75185 946 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 CTAGE8P0CG41 777 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 MATR3P43243 847 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 CTAGE6Q86UF2 777 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 CTAGE4Q8IX94 777 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 AFAP1L1Q8TED9 768 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 SOWAHDA6NJG2 315 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 EPB41L2O43491 1005 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 NLRP12P59046 1061 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 KRT32Q14532 448 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 NGDNQ8NEJ9 315 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 HOOK1Q9UJC3 728 aaKnown RBP12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 TTC21BQ7Z4L5 1316 aa12.17□□□□□ -0.46
TRAPPC12-223ENST00000497597 ZFYVE9O95405 1425 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 INO80Q9ULG1 1556 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 A0A0U1RQJ8 604 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 CCDC151A5D8V7 595 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 CASP8Q14790 479 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 ZNF526Q8TF50 670 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 ATRIPQ8WXE1 791 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 PNKPQ96T60 521 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 JPH2Q9BR39 696 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 AKAP2Q9Y2D5 859 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 MAP3K2Q9Y2U5 619 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 AOX1Q06278 1338 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 EBAG9O00559 213 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 ZEB2O60315 1214 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 RNF40O75150 1001 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 CCDC175P0C221 793 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 PFKFB1P16118 471 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 VSNL1P62760 191 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 SF3A3Q12874 501 aaKnown RBP eCLIP12.16□□□□□ -0.463e-9■□□□□ 10.4
TRAPPC12-223ENST00000497597 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 TSGA10IPQ3SY00 556 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 CLIC6Q96NY7 704 aa12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 PUS7Q96PZ0 661 aaKnown RBP12.16□□□□□ -0.46
TRAPPC12-223ENST00000497597 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 CEP57Q86XR8 500 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 CXorf56Q9H5V9 222 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 KIAA0754O94854 1291 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 MYOM2P54296 1465 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 CNPY4Q8N129 248 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 NSUN7Q8NE18 718 aaKnown RBP12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 NFE2L3Q9Y4A8 694 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 GOLGA8BA8MQT2 603 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 PSEN1P49768 467 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 TADA2BQ86TJ2 420 aa12.15□□□□□ -0.46
TRAPPC12-223ENST00000497597 QRICH2Q9H0J4 1663 aa12.15□□□□□ -0.47
TRAPPC12-223ENST00000497597 KCNQ3O43525 872 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 CYP21A2P08686 494 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 MYL6BP14649 208 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 DNA2P51530 1060 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 BRD3Q15059 726 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 NCAPH2Q6IBW4 605 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 LRRC31Q6UY01 552 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 NOC3LQ8WTT2 800 aaKnown RBP12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 EHD4Q9H223 541 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 GUCA1BQ9UMX6 200 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 MRFAP1Q9Y605 127 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 CAPN7Q9Y6W3 813 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 CTAGE9A4FU28 777 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 ENC1O14682 589 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 ATP8B1O43520 1251 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 PPP2R5AQ15172 486 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 LMOD2Q6P5Q4 547 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 MMS22LQ6ZRQ5 1243 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 SRGAP1Q7Z6B7 1085 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 SLC35F6Q8N357 371 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 RUFY1Q96T51 708 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 SHTN1A0MZ66 631 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 WASLO00401 505 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 GOLIM4O00461 696 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms