RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 FKBP4Q02790 459 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGCL-206ENST00000496907 MTX1Q13505 466 aa7.56□□□□□ -1.2
HMGCL-206ENST00000496907 HSP90AB4PQ58FF6 505 aa7.56□□□□□ -1.2
HMGCL-206ENST00000496907 VARS2Q5ST30 1063 aaKnown RBP7.56□□□□□ -1.2
HMGCL-206ENST00000496907 CIAPIN1Q6FI81 312 aa7.56□□□□□ -1.2
HMGCL-206ENST00000496907 LDHAL6AQ6ZMR3 332 aa7.56□□□□□ -1.2
HMGCL-206ENST00000496907 COL25A1Q9BXS0 654 aaPredicted RBP7.56□□□□□ -1.2
HMGCL-206ENST00000496907 GJA3Q9Y6H8 435 aa7.56□□□□□ -1.2
HMGCL-206ENST00000496907 CACNA1AO00555 2505 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 TRAF5O00463 557 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 PPEF1O14829 653 aaPredicted RBP7.55□□□□□ -1.2
HMGCL-206ENST00000496907 CA12O43570 354 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 ATP8B2P98198 1209 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 OLFM4Q6UX06 510 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 GPC2Q8N158 579 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 SYNE4Q8N205 404 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 PANK1Q8TE04 598 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 JDP2Q8WYK2 163 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 SUCLG2Q96I99 432 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 PSMD1Q99460 953 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 EYA3Q99504 573 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 BICC1Q9H694 974 aaKnown RBP7.55□□□□□ -1.2
HMGCL-206ENST00000496907 ZBTB40Q9NUA8 1239 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 RAPGEFL1Q9UHV5 662 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 PCDHB8Q9UN66 801 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 HPS5Q9UPZ3 1129 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 LEMD3Q9Y2U8 911 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 COG6Q9Y2V7 657 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 CHMP3Q9Y3E7 222 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 SUPT16HQ9Y5B9 1047 aaKnown RBP7.55□□□□□ -1.2
HMGCL-206ENST00000496907 BCORQ6W2J9 1755 aa7.55□□□□□ -1.2
HMGCL-206ENST00000496907 UNC80Q8N2C7 3258 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 PLIN1O60240 522 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 CIAO1O76071 339 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 ATP2B4P23634 1241 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 MAP2K2P36507 400 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 IARSP41252 1262 aaKnown RBP7.54□□□□□ -1.2
HMGCL-206ENST00000496907 EIF6P56537 245 aaKnown RBP7.54□□□□□ -1.2
HMGCL-206ENST00000496907 DPP8Q6V1X1 898 aaPredicted RBP7.54□□□□□ -1.2
HMGCL-206ENST00000496907 C7orf43Q8WVR3 580 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 MEIS3Q99687 375 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 GREM2Q9H772 168 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 COPRSQ9NQ92 184 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 CNNM1Q9NRU3 951 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 LRRFIP2Q9Y608 721 aaKnown RBP7.54□□□□□ -1.2
HMGCL-206ENST00000496907 ABCC12Q96J65 1359 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 NUP98P52948 1817 aa7.54□□□□□ -1.2
HMGCL-206ENST00000496907 FZD9O00144 591 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 SRGAP3O43295 1099 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 NEFLP07196 543 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 RLBP1P12271 317 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 IL15P40933 162 aaPredicted RBP7.53□□□□□ -1.2
HMGCL-206ENST00000496907 G3BP1Q13283 466 aaKnown RBP eCLIP7.53□□□□□ -1.2
HMGCL-206ENST00000496907 ERICH6BQ5W0A0 696 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 CST9Q5W186 159 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 ERC1Q8IUD2 1116 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
HMGCL-206ENST00000496907 KAZALD1Q96I82 304 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 ZIC5Q96T25 663 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 RTFDC1Q9BY42 306 aaPredicted RBP7.53□□□□□ -1.2
HMGCL-206ENST00000496907 ZC3H12CQ9C0D7 883 aaKnown RBP7.53□□□□□ -1.2
HMGCL-206ENST00000496907 ANKIB1Q9P2G1 1089 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 CEP126Q9P2H0 1117 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 NSFL1CQ9UNZ2 370 aaKnown RBP7.53□□□□□ -1.2
HMGCL-206ENST00000496907 AKAP2Q9Y2D5 859 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 TLL2Q9Y6L7 1015 aa7.53□□□□□ -1.2
HMGCL-206ENST00000496907 XDHP47989 1333 aa7.52□□□□□ -1.2
HMGCL-206ENST00000496907 G3V3G9 751 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 EYA2O00167 538 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 RAB11FIP3O75154 756 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 CELF2O95319 508 aaKnown RBP7.52□□□□□ -1.21
HMGCL-206ENST00000496907 EPS15P42566 896 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 KCNJ4P48050 445 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 MMP14P50281 582 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 UBE4AQ14139 1066 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 ZNF687Q8N1G0 1237 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 ANKRD44Q8N8A2 993 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 SSH3Q8TE77 659 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 CELF1Q92879 486 aaKnown RBP7.52□□□□□ -1.21
HMGCL-206ENST00000496907 IRX2Q9BZI1 471 aaPredicted RBP7.52□□□□□ -1.21
HMGCL-206ENST00000496907 ZNF408Q9H9D4 720 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 SEC31BQ9NQW1 1179 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 GGA1Q9UJY5 639 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 MINPP1Q9UNW1 487 aa7.52□□□□□ -1.21
HMGCL-206ENST00000496907 C6orf229H3BNL8 230 aa7.51□□□□□ -1.21
HMGCL-206ENST00000496907 SCNN1DP51172 638 aa7.51□□□□□ -1.21
HMGCL-206ENST00000496907 PTPN12Q05209 780 aaKnown RBP7.51□□□□□ -1.21
HMGCL-206ENST00000496907 WASHC4Q2M389 1173 aa7.51□□□□□ -1.21
HMGCL-206ENST00000496907 EPHA10Q5JZY3 1008 aa7.51□□□□□ -1.21
HMGCL-206ENST00000496907 C15orf52Q6ZUT6 534 aaKnown RBP7.51□□□□□ -1.21
HMGCL-206ENST00000496907 USP50Q70EL3 339 aaPredicted RBP7.51□□□□□ -1.21
HMGCL-206ENST00000496907 PODNQ7Z5L7 613 aa7.51□□□□□ -1.21
HMGCL-206ENST00000496907 SAPCD2Q86UD0 394 aa7.51□□□□□ -1.21
HMGCL-206ENST00000496907 PDCD7Q8N8D1 485 aaKnown RBP7.51□□□□□ -1.21
HMGCL-206ENST00000496907 CCDC85AQ96PX6 553 aaPredicted RBP7.51□□□□□ -1.21
HMGCL-206ENST00000496907 RWDD1Q9H446 243 aaPredicted RBP7.51□□□□□ -1.21
HMGCL-206ENST00000496907 NOP58Q9Y2X3 529 aaKnown RBP7.51□□□□□ -1.21
HMGCL-206ENST00000496907 RIPOR2Q9Y4F9 1068 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms