RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 HCSTQ9UBK5 93 aa7.6□□□□□ -1.19
CACNA1C-229ENST00000496818 FCF1Q9Y324 198 aaKnown RBP7.6□□□□□ -1.19
CACNA1C-229ENST00000496818 COL11A2P13942 1736 aaPredicted RBP7.6□□□□□ -1.19
CACNA1C-229ENST00000496818 CNTNAP1P78357 1384 aa7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 DDNO94850 711 aaPredicted RBP7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 A1BGP04217 495 aa7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 SNRPA1P09661 255 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 NPR1P16066 1061 aa7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 GTF2E1P29083 439 aaPredicted RBP7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 FKBP4Q02790 459 aaKnown RBP eCLIP7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 KCNC4Q03721 635 aa7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 IL17REQ8NFR9 667 aa7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 MKRN1Q9UHC7 482 aaKnown RBP7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 NIP7Q9Y221 180 aaKnown RBP eCLIP7.59□□□□□ -1.19
CACNA1C-229ENST00000496818 BCORQ6W2J9 1755 aa7.59□□□□□ -1.2
CACNA1C-229ENST00000496818 U2AF1L5P0DN76 240 aaPredicted RBP7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 U2AF1Q01081 240 aaKnown RBP eCLIP7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 EAPPQ56P03 285 aaPredicted RBP7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 TPTE2Q6XPS3 522 aa7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 PNMA8AQ86V59 439 aaPredicted RBP7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 RTKN2Q8IZC4 609 aa7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 ARMC2Q8NEN0 867 aa7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 BAP1Q92560 729 aa7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 HACL1Q9UJ83 578 aa7.58□□□□□ -1.2
CACNA1C-229ENST00000496818 AFDNP55196 1824 aaKnown RBP7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 TMEM88BA6NKF7 163 aa7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 POTECB2RU33 542 aa7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 LMOD1P29536 600 aaPredicted RBP7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 PIP4K2AP48426 406 aaPredicted RBP7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 PTK2Q05397 1052 aa7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 KIF6Q6ZMV9 814 aa7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 JDP2Q8WYK2 163 aa7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 NYXQ9GZU5 481 aa7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 IBTKQ9P2D0 1353 aaPredicted RBP7.57□□□□□ -1.2
CACNA1C-229ENST00000496818 RNF123Q5XPI4 1314 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 PASKQ96RG2 1323 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 ZNF541Q9H0D2 1346 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 MAGEB6P1A0A0J9YX57 407 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 FAM177BA6PVY3 158 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 KCNQ3O43525 872 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 ALDH1B1P30837 517 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 EPHX2P34913 555 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 IARSP41252 1262 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 CTCFP49711 727 aaPredicted RBP7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 AGERQ15109 404 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 PDXDC2PQ6P474 469 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 MCM10Q7L590 875 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 RPGRQ92834 1020 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 OCSTAMPQ9BR26 566 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 ARHGAP9Q9BRR9 750 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 TMX4Q9H1E5 349 aaPredicted RBP7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 ZNF277Q9NRM2 450 aaPredicted RBP7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-229ENST00000496818 HTATSF1O43719 755 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 EIF6P56537 245 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 CC2D2BQ6DHV5 1058 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 ZBTB33Q86T24 672 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 GPC2Q8N158 579 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 PHACTR3Q96KR7 559 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 YTHDC1Q96MU7 727 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 UCN2Q96RP3 112 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 PRDM10Q9NQV6 1147 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 ABT1Q9ULW3 272 aaKnown RBP7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 USP16Q9Y5T5 823 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 ANKRD31Q8N7Z5 1873 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 ABCC12Q96J65 1359 aa7.55□□□□□ -1.2
CACNA1C-229ENST00000496818 MAPK8IP3Q9UPT6 1336 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 RIC1Q4ADV7 1423 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 SIPA1L3O60292 1781 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 ARFGEF2Q9Y6D5 1785 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 PRAMEF22A3QJZ6 481 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 KLRG2A4D1S0 409 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 PALM3A6NDB9 673 aaPredicted RBP7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 RNF223E7ERA6 249 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 PIK3CDO00329 1044 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 FOXN1O15353 648 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 SOX11P35716 441 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 TBC1D9Q6ZT07 1266 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 ADAM32Q8TC27 787 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 FOXJ1Q92949 421 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 PSMD1Q99460 953 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 PCDH10Q9P2E7 1040 aa7.54□□□□□ -1.2
CACNA1C-229ENST00000496818 MAP3K15Q6ZN16 1313 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 SBF1O95248 1867 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 ERVV-1B6SEH8 477 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 FZD9O00144 591 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 ZBTB24O43167 697 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 PPP2R1AP30153 589 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 ECE1P42892 770 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 MAP2K1Q02750 393 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 DCTN1Q14203 1278 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 TAF7Q15545 349 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 CRY2Q49AN0 593 aa7.53□□□□□ -1.2
CACNA1C-229ENST00000496818 PLA2G2CQ5R387 149 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms