RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 BICC1Q9H694 974 aaKnown RBP7.48□□□□□ -1.21
SSBP1-213ENST00000496622 PRDM9Q9NQV7 894 aa7.48□□□□□ -1.21
SSBP1-213ENST00000496622 MTMR7Q9Y216 660 aa7.48□□□□□ -1.21
SSBP1-213ENST00000496622 EXOC5O00471 708 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 ZPR1O75312 459 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 HMMRO75330 724 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 HSP90AB1P08238 724 aaKnown RBP7.47□□□□□ -1.21
SSBP1-213ENST00000496622 SDSP20132 328 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 DMTNQ08495 405 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 KMT5BQ4FZB7 885 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 BMP2KLQ5H9B9 411 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 UBE3BQ7Z3V4 1068 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 GRM8O00222 908 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 ITGBL1O95965 494 aaPredicted RBP7.47□□□□□ -1.21
SSBP1-213ENST00000496622 KCNC4Q03721 635 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 MORN1Q5T089 497 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 NYAP1Q6ZVC0 841 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 NBPF11Q86T75 865 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 SYNE4Q8N205 404 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 SPIRE2Q8WWL2 714 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 C22orf23Q9BZE7 217 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 LRRCC1Q9C099 1032 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 ATG3Q9NT62 314 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 PCDHGC3Q9UN70 934 aa7.47□□□□□ -1.21
SSBP1-213ENST00000496622 NEURL1BA8MQ27 555 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 PPEF1O14829 653 aaPredicted RBP7.46□□□□□ -1.22
SSBP1-213ENST00000496622 HOXA2O43364 376 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 PDE1AP54750 535 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 LINS1Q8NG48 757 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 TBC1D32Q96NH3 1257 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 SLKQ9H2G2 1235 aaPredicted RBP7.46□□□□□ -1.22
SSBP1-213ENST00000496622 LMO7Q8WWI1 1683 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 TTC36A6NLP5 189 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 ERVV-2B6SEH9 535 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 ATP6V1AP38606 617 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 GCKRQ14397 625 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 TTC22Q5TAA0 569 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 SSH3Q8TE77 659 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 RILPL2Q969X0 211 aa7.46□□□□□ -1.22
SSBP1-213ENST00000496622 A0A087WZG4 1122 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 DDX58O95786 925 aaKnown RBP7.45□□□□□ -1.22
SSBP1-213ENST00000496622 FNBP4Q8N3X1 1017 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-213ENST00000496622 IL25Q9H293 177 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 UPF2Q9HAU5 1272 aaKnown RBP7.45□□□□□ -1.22
SSBP1-213ENST00000496622 POLR3EQ9NVU0 708 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 NEXNQ0ZGT2 675 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 DDB1Q16531 1140 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 MARCH10Q8NA82 808 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-213ENST00000496622 RHPN1Q8TCX5 695 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 METTL22Q9BUU2 404 aaPredicted RBP7.45□□□□□ -1.22
SSBP1-213ENST00000496622 CHMP3Q9Y3E7 222 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 CRYBG1Q9Y4K1 1723 aa7.45□□□□□ -1.22
SSBP1-213ENST00000496622 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
SSBP1-213ENST00000496622 MX1P20591 662 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 GPTP24298 496 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 CEP120Q8N960 986 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 TBC1D2Q9BYX2 928 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 TBC1D2BQ9UPU7 963 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 NDUFB9Q9Y6M9 179 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 IBTKQ9P2D0 1353 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-213ENST00000496622 FAM177BA6PVY3 158 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 S1PR4O95977 384 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 PPP1R18Q6NYC8 613 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 KCTD17Q8N5Z5 321 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 CCDC8Q9H0W5 538 aaPredicted RBP7.44□□□□□ -1.22
SSBP1-213ENST00000496622 IL21Q9HBE4 155 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 TLR7Q9NYK1 1049 aaKnown RBP7.44□□□□□ -1.22
SSBP1-213ENST00000496622 ZBTB1Q9Y2K1 713 aa7.44□□□□□ -1.22
SSBP1-213ENST00000496622 HLFQ16534 295 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 HSP90AB4PQ58FF6 505 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 SPATA31A1Q5TZJ5 1347 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 PRPF38BQ5VTL8 546 aaKnown RBP7.43□□□□□ -1.22
SSBP1-213ENST00000496622 KDM3BQ7LBC6 1761 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 ZBTB9Q96C00 473 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 TRIM44Q96DX7 344 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-213ENST00000496622 FAM89AQ96GI7 184 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 ABCA3Q99758 1704 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 BRWD3Q6RI45 1802 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 ZNF500O60304 480 aaPredicted RBP7.43□□□□□ -1.22
SSBP1-213ENST00000496622 ALDH1L1O75891 902 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 SASH1O94885 1247 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 CHGBP05060 677 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 LIMD1Q9UGP4 676 aa7.43□□□□□ -1.22
SSBP1-213ENST00000496622 TPM2P07951 284 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 QPCTQ16769 361 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 HSP90AB3PQ58FF7 597 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 LMBR1LQ6UX01 489 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 PLBD2Q8NHP8 589 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 ZNF594Q96JF6 807 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-213ENST00000496622 KIF2CQ99661 725 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 SALL3Q9BXA9 1300 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 CDC45O75419 566 aa7.42□□□□□ -1.22
SSBP1-213ENST00000496622 EAF2Q96CJ1 260 aaPredicted RBP7.42□□□□□ -1.22
SSBP1-213ENST00000496622 EDC3Q96F86 508 aaKnown RBP7.42□□□□□ -1.22
SSBP1-213ENST00000496622 KIF20AO95235 890 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 MYSM1Q5VVJ2 828 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 AACSQ86V21 672 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 BANK1Q8NDB2 785 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 THAP11Q96EK4 314 aa7.41□□□□□ -1.22
SSBP1-213ENST00000496622 SPSB2Q99619 263 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms