RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 AKAP2Q9Y2D5 859 aa28.14■■■□□ 2.1
CHRD-217ENST00000496527 EGFRP00533 1210 aa28.13■■■□□ 2.09
CHRD-217ENST00000496527 MMP14P50281 582 aa28.13■■■□□ 2.09
CHRD-217ENST00000496527 FKBP1AP62942 108 aaKnown RBP28.13■■■□□ 2.09
CHRD-217ENST00000496527 KIAA0825Q8IV33 1275 aa28.13■■■□□ 2.09
CHRD-217ENST00000496527 MYOZ2Q9NPC6 264 aa28.13■■■□□ 2.09
CHRD-217ENST00000496527 HDAC9Q9UKV0 1011 aa28.13■■■□□ 2.09
CHRD-217ENST00000496527 IQSEC3Q9UPP2 1182 aaPredicted RBP28.13■■■□□ 2.09
CHRD-217ENST00000496527 FAM205AQ6ZU69 1335 aa28.13■■■□□ 2.09
CHRD-217ENST00000496527 SURF6O75683 361 aaKnown RBP28.12■■■□□ 2.09
CHRD-217ENST00000496527 OS9Q13438 667 aaPredicted RBP28.12■■■□□ 2.09
CHRD-217ENST00000496527 ZNF646O15015 1829 aaPredicted RBP28.11■■■□□ 2.09
CHRD-217ENST00000496527 CERS5Q8N5B7 392 aa28.11■■■□□ 2.09
CHRD-217ENST00000496527 PASKQ96RG2 1323 aa28.11■■■□□ 2.09
CHRD-217ENST00000496527 RRP1P56182 461 aaKnown RBP28.1■■■□□ 2.09
CHRD-217ENST00000496527 TIMM10P62072 90 aa28.09■■■□□ 2.09
CHRD-217ENST00000496527 CHAF1AQ13111 956 aaPredicted RBP28.09■■■□□ 2.09
CHRD-217ENST00000496527 MFSD14BQ5SR56 506 aa28.09■■■□□ 2.09
CHRD-217ENST00000496527 RPAP2Q8IXW5 612 aaPredicted RBP28.09■■■□□ 2.09
CHRD-217ENST00000496527 GNL3LQ9NVN8 582 aaKnown RBP28.09■■■□□ 2.09
CHRD-217ENST00000496527 NOP58Q9Y2X3 529 aaKnown RBP28.09■■■□□ 2.09
CHRD-217ENST00000496527 A0A1B0GUL7 405 aa28.08■■■□□ 2.09
CHRD-217ENST00000496527 SCARF1Q14162 830 aa28.08■■■□□ 2.09
CHRD-217ENST00000496527 F8W031 263 aaPredicted RBP28.07■■■□□ 2.08
CHRD-217ENST00000496527 CDC37L1Q7L3B6 337 aa28.07■■■□□ 2.08
CHRD-217ENST00000496527 DCPSQ96C86 337 aaKnown RBP28.07■■■□□ 2.08
CHRD-217ENST00000496527 NEUROD6Q96NK8 337 aa28.07■■■□□ 2.08
CHRD-217ENST00000496527 HMMRO75330 724 aa28.06■■■□□ 2.08
CHRD-217ENST00000496527 ADORA1P30542 326 aa28.06■■■□□ 2.08
CHRD-217ENST00000496527 TBC1D22AQ8WUA7 517 aa28.06■■■□□ 2.08
CHRD-217ENST00000496527 GLIS2Q9BZE0 524 aaPredicted RBP28.06■■■□□ 2.08
CHRD-217ENST00000496527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.06■■■□□ 2.08
CHRD-217ENST00000496527 XAGE2Q96GT9 111 aa28.05■■■□□ 2.08
CHRD-217ENST00000496527 GGA3Q9NZ52 723 aa28.05■■■□□ 2.08
CHRD-217ENST00000496527 PHKA1P46020 1223 aa28.04■■■□□ 2.08
CHRD-217ENST00000496527 HTRA3P83110 453 aa28.04■■■□□ 2.08
CHRD-217ENST00000496527 ASTN2O75129 1339 aaPredicted RBP28.03■■■□□ 2.08
CHRD-217ENST00000496527 TRAF5O00463 557 aa28.03■■■□□ 2.08
CHRD-217ENST00000496527 CCDC102BQ68D86 513 aa28.03■■■□□ 2.08
CHRD-217ENST00000496527 KRT26Q7Z3Y9 468 aa28.03■■■□□ 2.08
CHRD-217ENST00000496527 USP48Q86UV5 1035 aa28.03■■■□□ 2.08
CHRD-217ENST00000496527 TMEM88BA6NKF7 163 aa28.02■■■□□ 2.08
CHRD-217ENST00000496527 WNT10BO00744 389 aa28.02■■■□□ 2.08
CHRD-217ENST00000496527 DLGAP5Q15398 846 aa28.02■■■□□ 2.08
CHRD-217ENST00000496527 NBPF9Q3BBW0 867 aa28.02■■■□□ 2.08
CHRD-217ENST00000496527 GORABQ5T7V8 394 aa28.02■■■□□ 2.08
CHRD-217ENST00000496527 ANGEL2Q5VTE6 544 aaKnown RBP28.02■■■□□ 2.08
CHRD-217ENST00000496527 GPR108Q9NPR9 543 aa28.02■■■□□ 2.08
CHRD-217ENST00000496527 CREBZFQ9NS37 354 aa28.02■■■□□ 2.08
CHRD-217ENST00000496527 TTF2Q9UNY4 1162 aaKnown RBP28.02■■■□□ 2.08
CHRD-217ENST00000496527 SEMA3EO15041 775 aa28.01■■■□□ 2.07
CHRD-217ENST00000496527 FMR1Q06787 632 aaKnown RBP eCLIP28.01■■■□□ 2.07
CHRD-217ENST00000496527 HSP90AB4PQ58FF6 505 aa28.01■■■□□ 2.07
CHRD-217ENST00000496527 SULF1Q8IWU6 871 aa28.01■■■□□ 2.07
CHRD-217ENST00000496527 WDR66Q8TBY9 1149 aa28.01■■■□□ 2.07
CHRD-217ENST00000496527 DENND2AQ9ULE3 1009 aa28.01■■■□□ 2.07
CHRD-217ENST00000496527 EXOC6BQ9Y2D4 811 aa28.01■■■□□ 2.07
CHRD-217ENST00000496527 TNNI3KQ59H18 835 aa28■■■□□ 2.07
CHRD-217ENST00000496527 ERC1Q8IUD2 1116 aa28■■■□□ 2.07
CHRD-217ENST00000496527 SIRT2Q8IXJ6 389 aa28■■■□□ 2.07
CHRD-217ENST00000496527 FPGT-TNNI3KV9GXZ4 949 aa28■■■□□ 2.07
CHRD-217ENST00000496527 ARAP2Q8WZ64 1704 aa27.99■■■□□ 2.07
CHRD-217ENST00000496527 RBM5P52756 815 aaKnown RBP eCLIP27.99■■■□□ 2.07
CHRD-217ENST00000496527 CFAP100Q494V2 611 aa27.99■■■□□ 2.07
CHRD-217ENST00000496527 MTMR14Q8NCE2 650 aa27.99■■■□□ 2.07
CHRD-217ENST00000496527 ZBED3Q96IU2 234 aaPredicted RBP27.99■■■□□ 2.07
CHRD-217ENST00000496527 PITPNM2Q9BZ72 1349 aa27.98■■■□□ 2.07
CHRD-217ENST00000496527 SUGT1Q9Y2Z0 365 aa27.98■■■□□ 2.07
CHRD-217ENST00000496527 ADM5C9JUS6 153 aa27.97■■■□□ 2.07
CHRD-217ENST00000496527 ZBTB22O15209 634 aa27.97■■■□□ 2.07
CHRD-217ENST00000496527 GRIK5Q16478 980 aa27.97■■■□□ 2.07
CHRD-217ENST00000496527 SERPINA10Q9UK55 444 aa27.97■■■□□ 2.07
CHRD-217ENST00000496527 CELF2O95319 508 aaKnown RBP27.96■■■□□ 2.07
CHRD-217ENST00000496527 COL1A1P02452 1464 aaPredicted RBP27.95■■■□□ 2.07
CHRD-217ENST00000496527 SPDYE2BA6NHP3 402 aa27.95■■■□□ 2.06
CHRD-217ENST00000496527 MYO1BO43795 1136 aa27.95■■■□□ 2.06
CHRD-217ENST00000496527 SPDYE6P0CI01 402 aa27.95■■■□□ 2.06
CHRD-217ENST00000496527 RASGRF1Q13972 1273 aa27.95■■■□□ 2.06
CHRD-217ENST00000496527 ZNF408Q9H9D4 720 aa27.95■■■□□ 2.06
CHRD-217ENST00000496527 PCDHAC2Q9Y5I4 1007 aa27.95■■■□□ 2.06
CHRD-217ENST00000496527 POLR2AP24928 1970 aaKnown RBP27.95■■■□□ 2.06
CHRD-217ENST00000496527 MAST3O60307 1309 aa27.94■■■□□ 2.06
CHRD-217ENST00000496527 MYH13Q9UKX3 1938 aa27.94■■■□□ 2.06
CHRD-217ENST00000496527 CST9Q5W186 159 aa27.94■■■□□ 2.06
CHRD-217ENST00000496527 DLK2Q6UY11 383 aa27.94■■■□□ 2.06
CHRD-217ENST00000496527 DNAJC5GQ8N7S2 189 aa27.94■■■□□ 2.06
CHRD-217ENST00000496527 PRMT6Q96LA8 375 aaPredicted RBP27.94■■■□□ 2.06
CHRD-217ENST00000496527 UQCRFS1P1P0C7P4 283 aa27.93■■■□□ 2.06
CHRD-217ENST00000496527 CRKP46108 304 aa27.93■■■□□ 2.06
CHRD-217ENST00000496527 HDLBPQ00341 1268 aaKnown RBP27.93■■■□□ 2.06
CHRD-217ENST00000496527 CCDC158Q5M9N0 1113 aa27.93■■■□□ 2.06
CHRD-217ENST00000496527 ZGPATQ8N5A5 531 aaKnown RBP27.93■■■□□ 2.06
CHRD-217ENST00000496527 RHPN1Q8TCX5 695 aa27.93■■■□□ 2.06
CHRD-217ENST00000496527 CRBNQ96SW2 442 aa27.93■■■□□ 2.06
CHRD-217ENST00000496527 DBNDD2Q9BQY9 259 aa27.93■■■□□ 2.06
CHRD-217ENST00000496527 ABT1Q9ULW3 272 aaKnown RBP27.93■■■□□ 2.06
CHRD-217ENST00000496527 PDS5AQ29RF7 1337 aaKnown RBP27.92■■■□□ 2.06
CHRD-217ENST00000496527 SALL1Q9NSC2 1324 aa27.92■■■□□ 2.06
CHRD-217ENST00000496527 APBB1O00213 710 aa27.92■■■□□ 2.06
CHRD-217ENST00000496527 RAB11FIP3O75154 756 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms