RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 SLC16A10Q8TF71 515 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 SH2D4AQ9H788 454 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 RC3H1Q5TC82 1133 aaKnown RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 MPHOSPH6Q99547 160 aaKnown RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 ARMT1Q9H993 441 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 CSADQ9Y600 493 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 NDUFB9Q9Y6M9 179 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 K7ELQ4 463 aaPredicted RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 USP48Q86UV5 1035 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 MAPKAPK5Q8IW41 473 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 CCDC12Q8WUD4 166 aaPredicted RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 PPP1R12BO60237 982 aaPredicted RBP12.79□□□□□ -0.36
NECAP2-207ENST00000496239 ME1P48163 572 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
NECAP2-207ENST00000496239 SSRP1Q08945 709 aaKnown RBP12.78□□□□□ -0.36
NECAP2-207ENST00000496239 CCDC102BQ68D86 513 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
NECAP2-207ENST00000496239 APPBP2Q92624 585 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 TMOD4Q9NZQ9 345 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 CARMIL3Q8ND23 1372 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 METAP2P50579 478 aaKnown RBP eCLIP12.78□□□□□ -0.36
NECAP2-207ENST00000496239 C8orf76Q96K31 380 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 TCEANC2Q96MN5 208 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 LRRC2Q9BYS8 371 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 GNAQP50148 359 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 ZYXQ15942 572 aaKnown RBP12.78□□□□□ -0.36
NECAP2-207ENST00000496239 CIAPIN1Q6FI81 312 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 BRF1Q92994 677 aa12.78□□□□□ -0.36
NECAP2-207ENST00000496239 SCLT1Q96NL6 688 aa12.77□□□□□ -0.36
NECAP2-207ENST00000496239 BMP2KQ9NSY1 1161 aaPredicted RBP12.77□□□□□ -0.36
NECAP2-207ENST00000496239 RNF181Q9P0P0 153 aa12.77□□□□□ -0.36
NECAP2-207ENST00000496239 KLF18A0A0U1RQI7 1052 aa12.77□□□□□ -0.36
NECAP2-207ENST00000496239 KINO60870 393 aaKnown RBP12.77□□□□□ -0.36
NECAP2-207ENST00000496239 SSH3Q8TE77 659 aa12.77□□□□□ -0.36
NECAP2-207ENST00000496239 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.36
NECAP2-207ENST00000496239 ZBTB43O43298 467 aa12.77□□□□□ -0.37
NECAP2-207ENST00000496239 PPFIA3O75145 1194 aa12.77□□□□□ -0.37
NECAP2-207ENST00000496239 GUCY1B3Q02153 619 aa12.77□□□□□ -0.37
NECAP2-207ENST00000496239 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.37
NECAP2-207ENST00000496239 TGFBRAP1Q8WUH2 860 aa12.77□□□□□ -0.37
NECAP2-207ENST00000496239 TCP10L2B9ZVM9 353 aa12.77□□□□□ -0.37
NECAP2-207ENST00000496239 FERMT3Q86UX7 667 aa12.77□□□□□ -0.37
NECAP2-207ENST00000496239 COPRSQ9NQ92 184 aa12.77□□□□□ -0.37
NECAP2-207ENST00000496239 WDR33Q9C0J8 1336 aaKnown RBP12.76□□□□□ -0.37
NECAP2-207ENST00000496239 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 KBTBD3Q8NAB2 608 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 ESYT1Q9BSJ8 1104 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 SH2B1Q9NRF2 756 aaPredicted RBP12.76□□□□□ -0.37
NECAP2-207ENST00000496239 ABCC4O15439 1325 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 LINC00116Q8NCU8 138 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 TTLL11Q8NHH1 800 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 LIMCH1Q9UPQ0 1083 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 GPAA1O43292 621 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 TPM1P09493 284 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 CHRNA5P30532 468 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
NECAP2-207ENST00000496239 DCAF15Q66K64 600 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 SASS6Q6UVJ0 657 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 VTI1AQ96AJ9 217 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 CCDC171Q6TFL3 1326 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 PRDM1O75626 825 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
NECAP2-207ENST00000496239 ITPK1Q13572 414 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 SKOR2Q2VWA4 1001 aaPredicted RBP12.76□□□□□ -0.37
NECAP2-207ENST00000496239 PLEKHM2Q8IWE5 1019 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 ARHGEF10LQ9HCE6 1279 aa12.76□□□□□ -0.37
NECAP2-207ENST00000496239 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
NECAP2-207ENST00000496239 CD163L1Q9NR16 1453 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 KRT85P78386 507 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 SLC26A6Q9BXS9 759 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 NBPF26B4DH59 902 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 PHKA1P46020 1223 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 NBPF10Q6P3W6 841 aaKnown RBP12.75□□□□□ -0.37
NECAP2-207ENST00000496239 SYNE4Q8N205 404 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 NBPF15Q8N660 670 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 OTUD7AQ8TE49 926 aaPredicted RBP12.75□□□□□ -0.37
NECAP2-207ENST00000496239 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
NECAP2-207ENST00000496239 ZNF532Q9HCE3 1301 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 CLRN2A0PK11 232 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 MED14O60244 1454 aa12.75□□□□□ -0.37
NECAP2-207ENST00000496239 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 FAM13BQ9NYF5 915 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 ADGRB1O14514 1584 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 B4DLN1 442 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 PRC1O43663 620 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 MRPL12P52815 198 aaKnown RBP12.74□□□□□ -0.37
NECAP2-207ENST00000496239 RTN1Q16799 776 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 C3P01024 1663 aa12.74□□□□□ -0.37
NECAP2-207ENST00000496239 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms