RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
PTPN7-218ENST00000496197 MYH7P12883 1935 aa16.52■□□□□ 0.24
PTPN7-218ENST00000496197 RAD17O75943 681 aa16.52■□□□□ 0.23
PTPN7-218ENST00000496197 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.23
PTPN7-218ENST00000496197 PODNQ7Z5L7 613 aa16.52■□□□□ 0.23
PTPN7-218ENST00000496197 ECHDC1Q9NTX5 307 aa16.52■□□□□ 0.23
PTPN7-218ENST00000496197 STAP2Q9UGK3 403 aa16.52■□□□□ 0.23
PTPN7-218ENST00000496197 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.23
PTPN7-218ENST00000496197 G3V3G9 751 aa16.51■□□□□ 0.23
PTPN7-218ENST00000496197 GTF2IP78347 998 aa16.51■□□□□ 0.23
PTPN7-218ENST00000496197 CXCL9Q07325 125 aa16.51■□□□□ 0.23
PTPN7-218ENST00000496197 GRIK5Q16478 980 aa16.51■□□□□ 0.23
PTPN7-218ENST00000496197 DCAF8Q5TAQ9 597 aa16.51■□□□□ 0.23
PTPN7-218ENST00000496197 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
PTPN7-218ENST00000496197 EDC3Q96F86 508 aaKnown RBP16.51■□□□□ 0.23
PTPN7-218ENST00000496197 ZNF512BQ96KM6 892 aaPredicted RBP16.51■□□□□ 0.23
PTPN7-218ENST00000496197 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
PTPN7-218ENST00000496197 MAST2Q6P0Q8 1798 aa16.5■□□□□ 0.23
PTPN7-218ENST00000496197 TTC41PQ6P2S7 1318 aa16.5■□□□□ 0.23
PTPN7-218ENST00000496197 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
PTPN7-218ENST00000496197 ATP5JP18859 108 aa16.5■□□□□ 0.23
PTPN7-218ENST00000496197 ZAP70P43403 619 aa16.5■□□□□ 0.23
PTPN7-218ENST00000496197 CHAF1AQ13111 956 aaPredicted RBP16.5■□□□□ 0.23
PTPN7-218ENST00000496197 CERS5Q8N5B7 392 aa16.5■□□□□ 0.23
PTPN7-218ENST00000496197 FAM205AQ6ZU69 1335 aa16.49■□□□□ 0.23
PTPN7-218ENST00000496197 PSMD14O00487 310 aa16.49■□□□□ 0.23
PTPN7-218ENST00000496197 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
PTPN7-218ENST00000496197 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
PTPN7-218ENST00000496197 UQCRFS1P1P0C7P4 283 aa16.49■□□□□ 0.23
PTPN7-218ENST00000496197 SPATA5Q8NB90 893 aa16.49■□□□□ 0.23
PTPN7-218ENST00000496197 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
PTPN7-218ENST00000496197 OSBPL3Q9H4L5 887 aa16.49■□□□□ 0.23
PTPN7-218ENST00000496197 ANTXR1Q9H6X2 564 aa16.49■□□□□ 0.23
PTPN7-218ENST00000496197 ZBTB22O15209 634 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-218ENST00000496197 RGS3P49796 1198 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 DACT2Q5SW24 774 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 TTLL5Q6EMB2 1281 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 TBC1D9Q6ZT07 1266 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
PTPN7-218ENST00000496197 USP17L3A6NCW0 530 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 USP17L4A6NCW7 530 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 SEMA3EO15041 775 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 USP17L1Q7RTZ2 530 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTPN7-218ENST00000496197 DNAJC2Q99543 621 aaKnown RBP16.48■□□□□ 0.23
PTPN7-218ENST00000496197 HAUS7Q99871 368 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 DENND2AQ9ULE3 1009 aa16.48■□□□□ 0.23
PTPN7-218ENST00000496197 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
PTPN7-218ENST00000496197 MYH2Q9UKX2 1941 aa16.47■□□□□ 0.23
PTPN7-218ENST00000496197 PDS5AQ29RF7 1337 aaKnown RBP16.47■□□□□ 0.23
PTPN7-218ENST00000496197 GSPT1P15170 499 aaKnown RBP16.47■□□□□ 0.23
PTPN7-218ENST00000496197 STRIP1Q5VSL9 837 aa16.47■□□□□ 0.23
PTPN7-218ENST00000496197 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
PTPN7-218ENST00000496197 GPATCH3Q96I76 525 aa16.47■□□□□ 0.23
PTPN7-218ENST00000496197 PIH1D3Q9NQM4 214 aaKnown RBP16.47■□□□□ 0.23
PTPN7-218ENST00000496197 AOX1Q06278 1338 aa16.46■□□□□ 0.23
PTPN7-218ENST00000496197 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
PTPN7-218ENST00000496197 PRDX5P30044 214 aa16.46■□□□□ 0.23
PTPN7-218ENST00000496197 MFSD14BQ5SR56 506 aa16.46■□□□□ 0.23
PTPN7-218ENST00000496197 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
PTPN7-218ENST00000496197 GOLIM4O00461 696 aa16.45■□□□□ 0.22
PTPN7-218ENST00000496197 GLRX3O76003 335 aaKnown RBP16.45■□□□□ 0.22
PTPN7-218ENST00000496197 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-218ENST00000496197 CHGBP05060 677 aa16.45■□□□□ 0.22
PTPN7-218ENST00000496197 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
PTPN7-218ENST00000496197 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
PTPN7-218ENST00000496197 GMLQ99445 158 aa16.45■□□□□ 0.22
PTPN7-218ENST00000496197 SALL1Q9NSC2 1324 aa16.44■□□□□ 0.22
PTPN7-218ENST00000496197 ERC2O15083 957 aa16.44■□□□□ 0.22
PTPN7-218ENST00000496197 TTC22Q5TAA0 569 aa16.44■□□□□ 0.22
PTPN7-218ENST00000496197 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-218ENST00000496197 PAG1Q9NWQ8 432 aa16.44■□□□□ 0.22
PTPN7-218ENST00000496197 GJA3Q9Y6H8 435 aa16.44■□□□□ 0.22
PTPN7-218ENST00000496197 WDR90Q96KV7 1748 aa16.44■□□□□ 0.22
PTPN7-218ENST00000496197 SLFNL1Q499Z3 407 aa16.43■□□□□ 0.22
PTPN7-218ENST00000496197 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
PTPN7-218ENST00000496197 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
PTPN7-218ENST00000496197 ZC3H4Q9UPT8 1303 aaKnown RBP16.43■□□□□ 0.22
PTPN7-218ENST00000496197 F8W031 263 aaPredicted RBP16.42■□□□□ 0.22
PTPN7-218ENST00000496197 GMPSP49915 693 aaPredicted RBP16.42■□□□□ 0.22
PTPN7-218ENST00000496197 KIAA0825Q8IV33 1275 aa16.42■□□□□ 0.22
PTPN7-218ENST00000496197 GPC2Q8N158 579 aa16.42■□□□□ 0.22
PTPN7-218ENST00000496197 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
PTPN7-218ENST00000496197 CDK5RAP2Q96SN8 1893 aa16.42■□□□□ 0.22
PTPN7-218ENST00000496197 SCNN1DP51172 638 aa16.42■□□□□ 0.22
PTPN7-218ENST00000496197 FKBP1AP62942 108 aaKnown RBP16.42■□□□□ 0.22
PTPN7-218ENST00000496197 TNIP1Q15025 636 aa16.42■□□□□ 0.22
PTPN7-218ENST00000496197 PCDHAC2Q9Y5I4 1007 aa16.42■□□□□ 0.22
PTPN7-218ENST00000496197 SCN4AP35499 1836 aa16.41■□□□□ 0.22
PTPN7-218ENST00000496197 GLTPD2A6NH11 291 aa16.41■□□□□ 0.22
PTPN7-218ENST00000496197 TBC1D22AQ8WUA7 517 aa16.41■□□□□ 0.22
PTPN7-218ENST00000496197 EGFRP00533 1210 aa16.4■□□□□ 0.22
PTPN7-218ENST00000496197 SDSP20132 328 aa16.4■□□□□ 0.22
PTPN7-218ENST00000496197 MECOMQ03112 1051 aa16.4■□□□□ 0.22
PTPN7-218ENST00000496197 DIXDC1Q155Q3 683 aa16.4■□□□□ 0.22
PTPN7-218ENST00000496197 AGBL3Q8NEM8 1001 aa16.4■□□□□ 0.22
PTPN7-218ENST00000496197 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
PTPN7-218ENST00000496197 POTECB2RU33 542 aa16.39■□□□□ 0.21
PTPN7-218ENST00000496197 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms