RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 CENPFP49454 3210 aa13.17□□□□□ -0.3
ERGIC3-219ENST00000496172 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
ERGIC3-219ENST00000496172 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-219ENST00000496172 TAF5LO75529 589 aa13.16□□□□□ -0.3
ERGIC3-219ENST00000496172 INTS3Q68E01 1043 aaKnown RBP13.16□□□□□ -0.3
ERGIC3-219ENST00000496172 ZNF594Q96JF6 807 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-219ENST00000496172 PLIN1O60240 522 aa13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 USP17L8P0C7I0 530 aa13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 ZNF280AP59817 542 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 HELBQ8NG08 1087 aaPredicted RBP13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 HDAC5Q9UQL6 1122 aa13.15□□□□□ -0.3
ERGIC3-219ENST00000496172 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 MMP14P50281 582 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 RARSP54136 660 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 CEP290O15078 2479 aa13.14□□□□□ -0.31
ERGIC3-219ENST00000496172 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 SZT2Q5T011 3432 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 TRIOBPQ9H2D6 2365 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 IPO8O15397 1037 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 FKTNO75072 461 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 KLRK1P26718 216 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 DACT2Q5SW24 774 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 ARHGAP45Q92619 1136 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 MYOZ2Q9NPC6 264 aa13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
ERGIC3-219ENST00000496172 UBTFL1P0CB47 393 aaPredicted RBP13.12□□□□□ -0.31
ERGIC3-219ENST00000496172 GTF2IP78347 998 aa13.12□□□□□ -0.31
ERGIC3-219ENST00000496172 SREBF2Q12772 1141 aa13.12□□□□□ -0.31
ERGIC3-219ENST00000496172 ANKRD44Q8N8A2 993 aa13.12□□□□□ -0.31
ERGIC3-219ENST00000496172 GMLQ99445 158 aa13.12□□□□□ -0.31
ERGIC3-219ENST00000496172 SNAP23O00161 211 aa13.11□□□□□ -0.31
ERGIC3-219ENST00000496172 UBE4AQ14139 1066 aa13.11□□□□□ -0.31
ERGIC3-219ENST00000496172 SCARF1Q14162 830 aa13.11□□□□□ -0.31
ERGIC3-219ENST00000496172 METTL24Q5JXM2 366 aa13.11□□□□□ -0.31
ERGIC3-219ENST00000496172 ANGEL2Q5VTE6 544 aaKnown RBP13.11□□□□□ -0.31
ERGIC3-219ENST00000496172 ZNF646O15015 1829 aaPredicted RBP13.11□□□□□ -0.31
ERGIC3-219ENST00000496172 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
ERGIC3-219ENST00000496172 IL1R1P14778 569 aa13.1□□□□□ -0.31
ERGIC3-219ENST00000496172 MXD3Q9BW11 206 aa13.1□□□□□ -0.31
ERGIC3-219ENST00000496172 PUS3Q9BZE2 481 aaKnown RBP13.1□□□□□ -0.31
ERGIC3-219ENST00000496172 RIPOR2Q9Y4F9 1068 aa13.1□□□□□ -0.31
ERGIC3-219ENST00000496172 CUL9Q8IWT3 2517 aa13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 HIBADHP31937 336 aaKnown RBP13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 VPS37DQ86XT2 251 aa13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 KIAA0825Q8IV33 1275 aa13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 ARMC5Q96C12 935 aa13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 IRS2Q9Y4H2 1338 aa13.09□□□□□ -0.31
ERGIC3-219ENST00000496172 SASH1O94885 1247 aa13.08□□□□□ -0.32
ERGIC3-219ENST00000496172 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
ERGIC3-219ENST00000496172 LRRC24Q50LG9 513 aa13.08□□□□□ -0.32
ERGIC3-219ENST00000496172 CAVIN4Q5BKX8 364 aa13.08□□□□□ -0.32
ERGIC3-219ENST00000496172 MOB2Q70IA6 237 aa13.08□□□□□ -0.32
ERGIC3-219ENST00000496172 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
ERGIC3-219ENST00000496172 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 BCAR3O75815 825 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 PDE8BO95263 885 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 GNAI3P08754 354 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 GYG1P46976 350 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 ATF7IPQ6VMQ6 1270 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 LRRFIP2Q9Y608 721 aaKnown RBP13.07□□□□□ -0.32
ERGIC3-219ENST00000496172 EYA2O00167 538 aa13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 IFIT1P09914 478 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 DLGAP5Q15398 846 aa13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 NBPF9Q3BBW0 867 aa13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 TDRD7Q8NHU6 1098 aaKnown RBP13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 FAM84BQ96KN1 310 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 A0A1B0GUL6 1792 aa13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 ZBED9Q6R2W3 1325 aa13.06□□□□□ -0.32
ERGIC3-219ENST00000496172 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 WNT10BO00744 389 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 MYO1BO43795 1136 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 TRIM27P14373 513 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 NF2P35240 595 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 RFX5P48382 616 aaPredicted RBP13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 INHBEP58166 350 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms