RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 C21orf2O43822 256 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 PDE6BP35913 854 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 MCAMP43121 646 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 ZAP70P43403 619 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 SCARF1Q14162 830 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 TTF1Q15361 905 aaPredicted RBP12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 AIDAQ96BJ3 306 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 FAM227BQ96M60 508 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 CRAMP1Q96RY5 1269 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 TAOK3Q9H2K8 898 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 MED23Q9ULK4 1368 aa12.93□□□□□ -0.34
ECHDC3-204ENST00000495787 LTBP3Q9NS15 1303 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 IQCA1LA6NCM1 817 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 SNAP23O00161 211 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 RNF113AO15541 343 aaKnown RBP12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 BBOX1O75936 387 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 CTCFP49711 727 aaPredicted RBP12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 ANAPC15P60006 121 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 RABEP1Q15276 862 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 SNX21Q969T3 373 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 IL17RAQ96F46 866 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 ANTXR1Q9H6X2 564 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 HELLSQ9NRZ9 838 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 GNL3LQ9NVN8 582 aaKnown RBP12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 DICER1Q9UPY3 1922 aaKnown RBP12.92□□□□□ -0.34
ECHDC3-204ENST00000495787 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 SLC34A2O95436 690 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 HSPA4P34932 840 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 KCNJ4P48050 445 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 BCAMP50895 628 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 MCMDC2Q4G0Z9 681 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 ZMYM1Q5SVZ6 1142 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 TMC4Q7Z404 712 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 LDHDQ86WU2 507 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 HMG20BQ9P0W2 317 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 ZNF219Q9P2Y4 722 aaPredicted RBP12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 LEMD3Q9Y2U8 911 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
ECHDC3-204ENST00000495787 ZNF804BA4D1E1 1349 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 PASKQ96RG2 1323 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 MYH13Q9UKX3 1938 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 ZBTB22O15209 634 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 CYP2E1P05181 493 aaPredicted RBP12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 SOGA3Q5TF21 947 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 PI16Q6UXB8 463 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.9□□□□□ -0.34
ECHDC3-204ENST00000495787 XDHP47989 1333 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 NPR1P16066 1061 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 PTH1RQ03431 593 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 RASGRF1Q13972 1273 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 FBXO33Q7Z6M2 555 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 CNKSR1Q969H4 720 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 FAM84BQ96KN1 310 aaPredicted RBP12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 TBC1D2Q9BYX2 928 aa12.89□□□□□ -0.35
ECHDC3-204ENST00000495787 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 TMEM88BA6NKF7 163 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 SEMA3EO15041 775 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 SRGNP10124 158 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 GYG1P46976 350 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 VEGFBP49765 207 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 STYK1Q6J9G0 422 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 C15orf52Q6ZUT6 534 aaKnown RBP12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 VPS37DQ86XT2 251 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 HSCBQ8IWL3 235 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 KCNB2Q92953 911 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 L3MBTL3Q96JM7 780 aaPredicted RBP12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 PIH1D3Q9NQM4 214 aaKnown RBP12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 ANKIB1Q9P2G1 1089 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 DENND2AQ9ULE3 1009 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
ECHDC3-204ENST00000495787 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 CHGBP05060 677 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 ATP2B4P23634 1241 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 HIBADHP31937 336 aaKnown RBP12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 ADD2P35612 726 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 SLC4A3P48751 1232 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 SP8Q8IXZ3 490 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 APPBP2Q92624 585 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 MASTLQ96GX5 879 aa12.87□□□□□ -0.35
ECHDC3-204ENST00000495787 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms