RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 LBX1P52954 281 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 RGMBQ6NW40 437 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 FBXO33Q7Z6M2 555 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 VGLL2Q8N8G2 317 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 MTMR14Q8NCE2 650 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 TDRD7Q8NHU6 1098 aaKnown RBP9.06□□□□□ -0.96
VPS52-221ENST00000495755 KLHDC4Q8TBB5 520 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 ZIC5Q96T25 663 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 HDAC9Q9UKV0 1011 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 SCAF8Q9UPN6 1271 aaKnown RBP9.06□□□□□ -0.96
VPS52-221ENST00000495755 PDE8BO95263 885 aa9.05□□□□□ -0.96
VPS52-221ENST00000495755 FKBP1BP68106 108 aa9.05□□□□□ -0.96
VPS52-221ENST00000495755 NOGQ13253 232 aa9.05□□□□□ -0.96
VPS52-221ENST00000495755 METTL24Q5JXM2 366 aa9.05□□□□□ -0.96
VPS52-221ENST00000495755 PRAMEF18Q5VWM3 479 aa9.05□□□□□ -0.96
VPS52-221ENST00000495755 DIEXFQ68CQ4 756 aaKnown RBP9.05□□□□□ -0.96
VPS52-221ENST00000495755 CCDC102AQ96A19 550 aa9.05□□□□□ -0.96
VPS52-221ENST00000495755 JAG2Q9Y219 1238 aa9.05□□□□□ -0.96
VPS52-221ENST00000495755 EYA2O00167 538 aa9.04□□□□□ -0.96
VPS52-221ENST00000495755 UBTFL1P0CB47 393 aaPredicted RBP9.04□□□□□ -0.96
VPS52-221ENST00000495755 FGFR2P21802 821 aa9.04□□□□□ -0.96
VPS52-221ENST00000495755 ZNF157P51786 506 aaPredicted RBP9.04□□□□□ -0.96
VPS52-221ENST00000495755 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
VPS52-221ENST00000495755 DLGAP5Q15398 846 aa9.04□□□□□ -0.96
VPS52-221ENST00000495755 INTS3Q68E01 1043 aaKnown RBP9.04□□□□□ -0.96
VPS52-221ENST00000495755 MOB2Q70IA6 237 aa9.04□□□□□ -0.96
VPS52-221ENST00000495755 ATG9AQ7Z3C6 839 aa9.04□□□□□ -0.96
VPS52-221ENST00000495755 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
VPS52-221ENST00000495755 PCDHAC2Q9Y5I4 1007 aa9.04□□□□□ -0.96
VPS52-221ENST00000495755 SPDYE2BA6NHP3 402 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 F8W031 263 aaPredicted RBP9.03□□□□□ -0.96
VPS52-221ENST00000495755 CA12O43570 354 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 SLC10A3P09131 477 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 SPDYE6P0CI01 402 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 KIF23Q02241 960 aaPredicted RBP9.03□□□□□ -0.96
VPS52-221ENST00000495755 CFAP100Q494V2 611 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 APOBEC3FQ8IUX4 373 aaKnown RBP9.03□□□□□ -0.96
VPS52-221ENST00000495755 PRMT6Q96LA8 375 aaPredicted RBP9.03□□□□□ -0.96
VPS52-221ENST00000495755 FBXO3Q9UK99 471 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 HDAC5Q9UQL6 1122 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 AOX1Q06278 1338 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 KIF16BQ96L93 1317 aa9.03□□□□□ -0.96
VPS52-221ENST00000495755 UBE2Q2LH0YL09 131 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 IPO8O15397 1037 aaKnown RBP9.02□□□□□ -0.97
VPS52-221ENST00000495755 BCAR3O75815 825 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 CIAO1O76071 339 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 BCAMP50895 628 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 PUM3Q15397 648 aaKnown RBP9.02□□□□□ -0.97
VPS52-221ENST00000495755 GRIK5Q16478 980 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 CAVIN4Q5BKX8 364 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 MFSD14BQ5SR56 506 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 VPS37DQ86XT2 251 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 CSRNP1Q96S65 589 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 MEIS3Q99687 375 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 DEFB129Q9H1M3 183 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 TSKSQ9UJT2 592 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 SERPINA10Q9UK55 444 aa9.02□□□□□ -0.97
VPS52-221ENST00000495755 LRRFIP2Q9Y608 721 aaKnown RBP9.02□□□□□ -0.97
VPS52-221ENST00000495755 PAPPA2Q9BXP8 1791 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 MYO1BO43795 1136 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 IFIT1P09914 478 aaKnown RBP9.01□□□□□ -0.97
VPS52-221ENST00000495755 TRIM27P14373 513 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 NF2P35240 595 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 HNRNPUQ00839 825 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS52-221ENST00000495755 LDLRAD1Q5T700 205 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 ATF7IPQ6VMQ6 1270 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 RASAL3Q86YV0 1011 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 LPIN2Q92539 896 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 COPRSQ9NQ92 184 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 TTF2Q9UNY4 1162 aaKnown RBP9.01□□□□□ -0.97
VPS52-221ENST00000495755 IQSEC3Q9UPP2 1182 aaPredicted RBP9.01□□□□□ -0.97
VPS52-221ENST00000495755 TNNQ9UQP3 1299 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 PPP2R3BQ9Y5P8 575 aa9.01□□□□□ -0.97
VPS52-221ENST00000495755 COL1A1P02452 1464 aaPredicted RBP9.01□□□□□ -0.97
VPS52-221ENST00000495755 CLRN2A0PK11 232 aa9□□□□□ -0.97
VPS52-221ENST00000495755 GNAI3P08754 354 aa9□□□□□ -0.97
VPS52-221ENST00000495755 SLC5A1P13866 664 aa9□□□□□ -0.97
VPS52-221ENST00000495755 IL15P40933 162 aaPredicted RBP9□□□□□ -0.97
VPS52-221ENST00000495755 RBM5P52756 815 aaKnown RBP eCLIP9□□□□□ -0.97
VPS52-221ENST00000495755 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
VPS52-221ENST00000495755 CHAF1AQ13111 956 aaPredicted RBP9□□□□□ -0.97
VPS52-221ENST00000495755 MTX1Q13505 466 aa9□□□□□ -0.97
VPS52-221ENST00000495755 TTLL12Q14166 644 aaPredicted RBP9□□□□□ -0.97
VPS52-221ENST00000495755 REM2Q8IYK8 340 aaPredicted RBP9□□□□□ -0.97
VPS52-221ENST00000495755 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
VPS52-221ENST00000495755 TBC1D22AQ8WUA7 517 aa9□□□□□ -0.97
VPS52-221ENST00000495755 FRAT1Q92837 279 aaPredicted RBP9□□□□□ -0.97
VPS52-221ENST00000495755 MRIQ9BWK5 157 aa9□□□□□ -0.97
VPS52-221ENST00000495755 SIL1Q9H173 461 aa9□□□□□ -0.97
VPS52-221ENST00000495755 RNF186Q9NXI6 227 aa9□□□□□ -0.97
VPS52-221ENST00000495755 SAGE1Q9NXZ1 904 aa9□□□□□ -0.97
VPS52-221ENST00000495755 ZNF70Q9UC06 446 aaPredicted RBP9□□□□□ -0.97
VPS52-221ENST00000495755 FRAT2O75474 233 aaPredicted RBP8.99□□□□□ -0.97
VPS52-221ENST00000495755 CAPN15O75808 1086 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 CRKP46108 304 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 RASA3Q14644 834 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 MAP3K11Q16584 847 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 ATP2B3Q16720 1220 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 SUPT20HL1Q3ZLR7 823 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms