RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PSMA5P28066 241 aa12.3□□□□□ -0.44
HDAC3-214ENST00000495485 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
HDAC3-214ENST00000495485 KIF2CQ99661 725 aa12.3□□□□□ -0.44
HDAC3-214ENST00000495485 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
HDAC3-214ENST00000495485 CHMP5Q9NZZ3 219 aa12.3□□□□□ -0.44
HDAC3-214ENST00000495485 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
HDAC3-214ENST00000495485 GGA1Q9UJY5 639 aa12.3□□□□□ -0.44
HDAC3-214ENST00000495485 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
HDAC3-214ENST00000495485 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
HDAC3-214ENST00000495485 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
HDAC3-214ENST00000495485 NMIQ13287 307 aaPredicted RBP12.29□□□□□ -0.44
HDAC3-214ENST00000495485 MCMDC2Q4G0Z9 681 aa12.29□□□□□ -0.44
HDAC3-214ENST00000495485 LSG1Q9H089 658 aaKnown RBP12.29□□□□□ -0.44
HDAC3-214ENST00000495485 HMG20BQ9P0W2 317 aa12.29□□□□□ -0.44
HDAC3-214ENST00000495485 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
HDAC3-214ENST00000495485 NSFL1CQ9UNZ2 370 aaKnown RBP12.29□□□□□ -0.44
HDAC3-214ENST00000495485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.29□□□□□ -0.44
HDAC3-214ENST00000495485 TIAM2Q8IVF5 1701 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 GOLIM4O00461 696 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 NEK4P51957 841 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 UBE4AQ14139 1066 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 KRT32Q14532 448 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 C9orf131Q5VYM1 1079 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
HDAC3-214ENST00000495485 ZC3H12CQ9C0D7 883 aaKnown RBP12.28□□□□□ -0.44
HDAC3-214ENST00000495485 CWC22Q9HCG8 908 aaKnown RBP12.28□□□□□ -0.44
HDAC3-214ENST00000495485 GNL3LQ9NVN8 582 aaKnown RBP12.28□□□□□ -0.44
HDAC3-214ENST00000495485 RNF181Q9P0P0 153 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
HDAC3-214ENST00000495485 WWC3Q9ULE0 1092 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 CCDC171Q6TFL3 1326 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 MED23Q9ULK4 1368 aa12.28□□□□□ -0.44
HDAC3-214ENST00000495485 MMP14P50281 582 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 CHRNDQ07001 517 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 WASHC4Q2M389 1173 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 TBC1D16Q8TBP0 767 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 MAP4K1Q92918 833 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 TM6SF1Q9BZW5 370 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.45
HDAC3-214ENST00000495485 PSME4Q14997 1843 aa12.27□□□□□ -0.45
HDAC3-214ENST00000495485 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 C6orf229H3BNL8 230 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 ZBTB22O15209 634 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 RNF113AO15541 343 aaKnown RBP12.26□□□□□ -0.45
HDAC3-214ENST00000495485 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 UFL1O94874 794 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 GPSM2P81274 684 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 RASSF7Q02833 373 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 CAVIN4Q5BKX8 364 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 NIM1KQ8IY84 436 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
HDAC3-214ENST00000495485 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
HDAC3-214ENST00000495485 ARAP2Q8WZ64 1704 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 SCN4AP35499 1836 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 FZD9O00144 591 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 YY1P25490 414 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 ARID4AP29374 1257 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-214ENST00000495485 EIF6P56537 245 aaKnown RBP12.25□□□□□ -0.45
HDAC3-214ENST00000495485 PODNQ7Z5L7 613 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 FAM227BQ96M60 508 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 ZNF277Q9NRM2 450 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-214ENST00000495485 CTNNA3Q9UI47 895 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 ZNRF3Q9ULT6 936 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 ZNF804BA4D1E1 1349 aa12.25□□□□□ -0.45
HDAC3-214ENST00000495485 G3V3G9 751 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 IGSF3O75054 1194 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 HMGB1P09429 215 aaKnown RBP12.24□□□□□ -0.45
HDAC3-214ENST00000495485 PTMSP20962 102 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 FGFR2P21802 821 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 TNIP1Q15025 636 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 ANKRD1Q15327 319 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 ZMYM1Q5SVZ6 1142 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 CCDC102BQ68D86 513 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 KCNB2Q92953 911 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 DSCC1Q9BVC3 393 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 COA1Q9GZY4 146 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 POLLQ9UGP5 575 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 RBM8AQ9Y5S9 174 aaKnown RBP12.24□□□□□ -0.45
HDAC3-214ENST00000495485 SNX14Q9Y5W7 946 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 CYP46A1Q9Y6A2 500 aa12.24□□□□□ -0.45
HDAC3-214ENST00000495485 MYH7P12883 1935 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 A0A0D9SFI3 127 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 GLTPD2A6NH11 291 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 ADORA1P30542 326 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 MAP3K12Q12852 859 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 NECTIN1Q15223 517 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 TSGA10IPQ3SY00 556 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-214ENST00000495485 OLFM4Q6UX06 510 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 ZNF804AQ7Z570 1209 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 VPS37DQ86XT2 251 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 GPC2Q8N158 579 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 APPBP2Q92624 585 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
HDAC3-214ENST00000495485 ZSCAN31Q96LW9 406 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-214ENST00000495485 COL4A1P02462 1669 aa12.22□□□□□ -0.45
HDAC3-214ENST00000495485 MYH13Q9UKX3 1938 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms