RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CCDC57Q2TAC2 916 aa19.6■□□□□ 0.73
CBX4-204ENST00000495122 IRS4O14654 1257 aaPredicted RBP19.59■□□□□ 0.73
CBX4-204ENST00000495122 LMOD1P29536 600 aaPredicted RBP19.59■□□□□ 0.73
CBX4-204ENST00000495122 HSPA4P34932 840 aa19.59■□□□□ 0.73
CBX4-204ENST00000495122 DDIT3P35638 169 aa19.59■□□□□ 0.73
CBX4-204ENST00000495122 NBR1Q14596 966 aa19.59■□□□□ 0.73
CBX4-204ENST00000495122 ATG9AQ7Z3C6 839 aa19.59■□□□□ 0.73
CBX4-204ENST00000495122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.59■□□□□ 0.73
CBX4-204ENST00000495122 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
CBX4-204ENST00000495122 AKAP2Q9Y2D5 859 aa19.59■□□□□ 0.73
CBX4-204ENST00000495122 CHMP3Q9Y3E7 222 aa19.59■□□□□ 0.73
CBX4-204ENST00000495122 ZNF609O15014 1411 aa19.59■□□□□ 0.73
CBX4-204ENST00000495122 KLHDC4Q8TBB5 520 aa19.58■□□□□ 0.72
CBX4-204ENST00000495122 CCDC8Q9H0W5 538 aaPredicted RBP19.58■□□□□ 0.72
CBX4-204ENST00000495122 SLKQ9H2G2 1235 aaPredicted RBP19.58■□□□□ 0.72
CBX4-204ENST00000495122 ZNRF3Q9ULT6 936 aa19.58■□□□□ 0.72
CBX4-204ENST00000495122 CLEC11AQ9Y240 323 aa19.58■□□□□ 0.72
CBX4-204ENST00000495122 CNTNAP1P78357 1384 aa19.57■□□□□ 0.72
CBX4-204ENST00000495122 EPS15P42566 896 aa19.57■□□□□ 0.72
CBX4-204ENST00000495122 CXCL9Q07325 125 aa19.57■□□□□ 0.72
CBX4-204ENST00000495122 DBNLQ9UJU6 430 aaKnown RBP19.57■□□□□ 0.72
CBX4-204ENST00000495122 HSP90AA1P07900 732 aaKnown RBP19.56■□□□□ 0.72
CBX4-204ENST00000495122 IFIT5Q13325 482 aaKnown RBP19.56■□□□□ 0.72
CBX4-204ENST00000495122 MAP1SQ66K74 1059 aaPredicted RBP19.56■□□□□ 0.72
CBX4-204ENST00000495122 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
CBX4-204ENST00000495122 LSG1Q9H089 658 aaKnown RBP19.56■□□□□ 0.72
CBX4-204ENST00000495122 PDE8AO60658 829 aa19.55■□□□□ 0.72
CBX4-204ENST00000495122 HAUS7Q99871 368 aa19.55■□□□□ 0.72
CBX4-204ENST00000495122 CWC22Q9HCG8 908 aaKnown RBP19.55■□□□□ 0.72
CBX4-204ENST00000495122 GPRC5DQ9NZD1 345 aa19.55■□□□□ 0.72
CBX4-204ENST00000495122 CEP126Q9P2H0 1117 aa19.55■□□□□ 0.72
CBX4-204ENST00000495122 MKRN1Q9UHC7 482 aaKnown RBP19.55■□□□□ 0.72
CBX4-204ENST00000495122 TMEM88BA6NKF7 163 aa19.54■□□□□ 0.72
CBX4-204ENST00000495122 YDJCA8MPS7 323 aa19.54■□□□□ 0.72
CBX4-204ENST00000495122 CTSWP56202 376 aa19.54■□□□□ 0.72
CBX4-204ENST00000495122 USP50Q70EL3 339 aaPredicted RBP19.54■□□□□ 0.72
CBX4-204ENST00000495122 KCNB2Q92953 911 aa19.54■□□□□ 0.72
CBX4-204ENST00000495122 TLR7Q9NYK1 1049 aaKnown RBP19.54■□□□□ 0.72
CBX4-204ENST00000495122 RTL9Q8NET4 1388 aa19.54■□□□□ 0.72
CBX4-204ENST00000495122 MAP4K4O95819 1239 aaPredicted RBP19.53■□□□□ 0.72
CBX4-204ENST00000495122 HSPA1AP0DMV8 641 aaKnown RBP19.53■□□□□ 0.72
CBX4-204ENST00000495122 HSPA1BP0DMV9 641 aaKnown RBP19.53■□□□□ 0.72
CBX4-204ENST00000495122 PTMSP20962 102 aa19.53■□□□□ 0.72
CBX4-204ENST00000495122 GMPSP49915 693 aaPredicted RBP19.53■□□□□ 0.72
CBX4-204ENST00000495122 GPSM2P81274 684 aa19.53■□□□□ 0.72
CBX4-204ENST00000495122 LRRFIP1Q32MZ4 808 aaKnown RBP19.53■□□□□ 0.72
CBX4-204ENST00000495122 CIAPIN1Q6FI81 312 aa19.53■□□□□ 0.72
CBX4-204ENST00000495122 FSD1Q9BTV5 496 aa19.53■□□□□ 0.72
CBX4-204ENST00000495122 ANKRD18BA2A2Z9 1011 aa19.52■□□□□ 0.72
CBX4-204ENST00000495122 TAF7LQ5H9L4 462 aa19.52■□□□□ 0.72
CBX4-204ENST00000495122 CWC27Q6UX04 472 aaKnown RBP19.52■□□□□ 0.72
CBX4-204ENST00000495122 TTLL11Q8NHH1 800 aa19.52■□□□□ 0.72
CBX4-204ENST00000495122 SEC31BQ9NQW1 1179 aa19.52■□□□□ 0.72
CBX4-204ENST00000495122 ADARB2Q9NS39 739 aaKnown RBP19.52■□□□□ 0.72
CBX4-204ENST00000495122 POLLQ9UGP5 575 aa19.52■□□□□ 0.72
CBX4-204ENST00000495122 NSFL1CQ9UNZ2 370 aaKnown RBP19.52■□□□□ 0.72
CBX4-204ENST00000495122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.52■□□□□ 0.72
CBX4-204ENST00000495122 MED23Q9ULK4 1368 aa19.52■□□□□ 0.72
CBX4-204ENST00000495122 CCDC171Q6TFL3 1326 aa19.51■□□□□ 0.71
CBX4-204ENST00000495122 RAD17O75943 681 aa19.51■□□□□ 0.71
CBX4-204ENST00000495122 CD2BP2O95400 341 aaKnown RBP19.51■□□□□ 0.71
CBX4-204ENST00000495122 RPS8P62241 208 aaKnown RBP19.51■□□□□ 0.71
CBX4-204ENST00000495122 COL13A1Q5TAT6 717 aaPredicted RBP19.51■□□□□ 0.71
CBX4-204ENST00000495122 DBNDD2Q9BQY9 259 aa19.51■□□□□ 0.71
CBX4-204ENST00000495122 TM6SF1Q9BZW5 370 aa19.51■□□□□ 0.71
CBX4-204ENST00000495122 BOLA2Q9H3K6 86 aa19.51■□□□□ 0.71
CBX4-204ENST00000495122 ECM29Q5VYK3 1845 aa19.51■□□□□ 0.71
CBX4-204ENST00000495122 TNIP1Q15025 636 aa19.5■□□□□ 0.71
CBX4-204ENST00000495122 WASHC4Q2M389 1173 aa19.5■□□□□ 0.71
CBX4-204ENST00000495122 CCDC152Q4G0S7 254 aa19.5■□□□□ 0.71
CBX4-204ENST00000495122 NEK4P51957 841 aa19.49■□□□□ 0.71
CBX4-204ENST00000495122 KBTBD3Q8NAB2 608 aa19.49■□□□□ 0.71
CBX4-204ENST00000495122 TBC1D16Q8TBP0 767 aa19.49■□□□□ 0.71
CBX4-204ENST00000495122 INTS4Q96HW7 963 aaKnown RBP19.49■□□□□ 0.71
CBX4-204ENST00000495122 DBNDD1Q9H9R9 158 aa19.49■□□□□ 0.71
CBX4-204ENST00000495122 PODXL2Q9NZ53 605 aa19.49■□□□□ 0.71
CBX4-204ENST00000495122 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
CBX4-204ENST00000495122 A0A1B0GUL7 405 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 C6orf229H3BNL8 230 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 ZKSCAN1P17029 563 aaPredicted RBP19.48■□□□□ 0.71
CBX4-204ENST00000495122 NUCB2P80303 420 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 NMIQ13287 307 aaPredicted RBP19.48■□□□□ 0.71
CBX4-204ENST00000495122 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 LRRC24Q50LG9 513 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 CCDC158Q5M9N0 1113 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 RNF20Q5VTR2 975 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 MAP4K1Q92918 833 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 ZNF512BQ96KM6 892 aaPredicted RBP19.48■□□□□ 0.71
CBX4-204ENST00000495122 GPR101Q96P66 508 aaPredicted RBP19.48■□□□□ 0.71
CBX4-204ENST00000495122 EYA3Q99504 573 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 IL25Q9H293 177 aa19.48■□□□□ 0.71
CBX4-204ENST00000495122 RASSF10A6NK89 507 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 RIMBP2O15034 1052 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 ECE2O60344 883 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 ITGA6P23229 1130 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 VEGFBP49765 207 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 FMR1Q06787 632 aaKnown RBP eCLIP19.47■□□□□ 0.71
CBX4-204ENST00000495122 CCDC85AQ96PX6 553 aaPredicted RBP19.47■□□□□ 0.71
CBX4-204ENST00000495122 PALD1Q9ULE6 856 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 RIPOR2Q9Y4F9 1068 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms