RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 FCHSD1Q86WN1 690 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 CKAP2LQ8IYA6 745 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 MSANTD4Q8NCY6 345 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 TSC22D3Q99576 134 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 DNAJC25Q9H1X3 360 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 UNC45AQ9H3U1 944 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 TMEM165Q9HC07 324 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 CWC25Q9NXE8 425 aaPredicted RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 HOOK1Q9UJC3 728 aaKnown RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 ARHGEF11O15085 1522 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 CDHR2Q9BYE9 1310 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 SHANK2Q9UPX8 1470 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 DISP3Q9P2K9 1392 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 ASXL1Q8IXJ9 1541 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 KIF3BO15066 747 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 SASH1O94885 1247 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 GNAI3P08754 354 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 CHMP4BP1P59074 171 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 CUL3Q13618 768 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 TUBB2AQ13885 445 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 APLFQ8IW19 511 aaPredicted RBP7.18□□□□□ -1.26
FGD4-208ENST00000494977 KIRREL3Q8IZU9 778 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 TMEM57Q8N5G2 664 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 SYTL4Q96C24 671 aaPredicted RBP7.18□□□□□ -1.26
FGD4-208ENST00000494977 SCLT1Q96NL6 688 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 GORASP1Q9BQQ3 440 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 TUBB2BQ9BVA1 445 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 CAPS2Q9BXY5 557 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 YIPF3Q9GZM5 350 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 ACTR5Q9H9F9 607 aaPredicted RBP7.18□□□□□ -1.26
FGD4-208ENST00000494977 SLC40A1Q9NP59 571 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 SLC39A2Q9NP94 309 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 TMOD4Q9NZQ9 345 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 TPCN1Q9ULQ1 816 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 TRPC6Q9Y210 931 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 NPHP3Q7Z494 1330 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 LAMC1P11047 1609 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 CARMIL1Q5VZK9 1371 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 EIF3HO15372 352 aaKnown RBP eCLIP7.18□□□□□ -1.26
FGD4-208ENST00000494977 E2F6O75461 281 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 SMNDC1O75940 238 aaKnown RBP eCLIP7.18□□□□□ -1.26
FGD4-208ENST00000494977 ZNF24P17028 368 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 ZNF280DQ6N043 979 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 SRGAP1Q7Z6B7 1085 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 KIAA0825Q8IV33 1275 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 RUNDC1Q96C34 613 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 CLSTN2Q9H4D0 955 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 YTHDC2Q9H6S0 1430 aaKnown RBP7.18□□□□□ -1.26
FGD4-208ENST00000494977 ABCB6Q9NP58 842 aa7.18□□□□□ -1.26
FGD4-208ENST00000494977 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.18□□□□□ -1.26
FGD4-208ENST00000494977 PPP1R12BO60237 982 aaPredicted RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 PPFIA3O75145 1194 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 RNF8O76064 485 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 PRPF6O94906 941 aaKnown RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 ATP5JP18859 108 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 MCM3P25205 808 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 SESN3P58005 492 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 KRT85P78386 507 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 PRPF4BQ13523 1007 aaKnown RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 E2F5Q15329 346 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 CCDC80Q76M96 950 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 BZW1Q7L1Q6 419 aaKnown RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 ARMC9Q7Z3E5 817 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 PLEKHM2Q8IWE5 1019 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 IGSF22Q8N9C0 903 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 PAGR1Q9BTK6 254 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 LRRCC1Q9C099 1032 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 KAT14Q9H8E8 782 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 SYNPO2Q9UMS6 1093 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 KDM2AQ9Y2K7 1162 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 CEP170Q5SW79 1584 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 SETD1BQ9UPS6 1966 aaKnown RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 TRPM1Q7Z4N2 1603 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 SMAPO00193 183 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 NDUFAB1O14561 156 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 CREB3O43889 395 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 VCAM1P19320 739 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 DYNC1I2Q13409 638 aaKnown RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 SFMBT2Q5VUG0 894 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 PRPF40BQ6NWY9 871 aaKnown RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 CYB5D1Q6P9G0 228 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 RNF168Q8IYW5 571 aaPredicted RBP7.17□□□□□ -1.26
FGD4-208ENST00000494977 GALNT15Q8N3T1 639 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 OGFOD1Q8N543 542 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 CUL5Q93034 780 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 DACT1Q9NYF0 836 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 GGA2Q9UJY4 613 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 ITSN2Q9NZM3 1697 aa7.17□□□□□ -1.26
FGD4-208ENST00000494977 POLR3AO14802 1390 aaPredicted RBP7.16□□□□□ -1.26
FGD4-208ENST00000494977 IPO5O00410 1097 aaKnown RBP7.16□□□□□ -1.26
FGD4-208ENST00000494977 SMIM24O75264 130 aa7.16□□□□□ -1.26
FGD4-208ENST00000494977 ATP6V1G1O75348 118 aa7.16□□□□□ -1.26
FGD4-208ENST00000494977 WDHD1O75717 1129 aaPredicted RBP7.16□□□□□ -1.26
FGD4-208ENST00000494977 LUC7L3O95232 432 aaKnown RBP7.16□□□□□ -1.26
FGD4-208ENST00000494977 DNM1Q05193 864 aaKnown RBP7.16□□□□□ -1.26
FGD4-208ENST00000494977 ENOX2Q16206 610 aaKnown RBP7.16□□□□□ -1.26
FGD4-208ENST00000494977 STX1AQ16623 288 aa7.16□□□□□ -1.26
FGD4-208ENST00000494977 CCDC13Q8IYE1 715 aa7.16□□□□□ -1.26
FGD4-208ENST00000494977 FAM177A1Q8N128 213 aaPredicted RBP7.16□□□□□ -1.26
FGD4-208ENST00000494977 SMARCC2Q8TAQ2 1214 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms