RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 PLIN1O60240 522 aa14.73□□□□□ -0.05
VTI1A-208ENST00000494728 IL1R1P14778 569 aa14.73□□□□□ -0.05
VTI1A-208ENST00000494728 ZNF157P51786 506 aaPredicted RBP14.73□□□□□ -0.05
VTI1A-208ENST00000494728 BEGAINQ9BUH8 593 aa14.73□□□□□ -0.05
VTI1A-208ENST00000494728 CNNM1Q9NRU3 951 aa14.73□□□□□ -0.05
VTI1A-208ENST00000494728 PTPRCP08575 1304 aa14.72□□□□□ -0.05
VTI1A-208ENST00000494728 KIF23Q02241 960 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-208ENST00000494728 RABL6Q3YEC7 729 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-208ENST00000494728 TRMT2AQ8IZ69 625 aaKnown RBP14.72□□□□□ -0.05
VTI1A-208ENST00000494728 OGFOD1Q8N543 542 aa14.72□□□□□ -0.05
VTI1A-208ENST00000494728 F8W031 263 aaPredicted RBP14.71□□□□□ -0.05
VTI1A-208ENST00000494728 GYG1P46976 350 aa14.71□□□□□ -0.05
VTI1A-208ENST00000494728 LRRC24Q50LG9 513 aa14.71□□□□□ -0.05
VTI1A-208ENST00000494728 TAF7LQ5H9L4 462 aa14.71□□□□□ -0.05
VTI1A-208ENST00000494728 ZNF804AQ7Z570 1209 aa14.71□□□□□ -0.05
VTI1A-208ENST00000494728 KLHDC4Q8TBB5 520 aa14.71□□□□□ -0.05
VTI1A-208ENST00000494728 FZD1Q9UP38 647 aa14.71□□□□□ -0.05
VTI1A-208ENST00000494728 UBE2Q2LH0YL09 131 aa14.7□□□□□ -0.06
VTI1A-208ENST00000494728 ABHD8Q96I13 439 aa14.7□□□□□ -0.06
VTI1A-208ENST00000494728 USP44Q9H0E7 712 aa14.7□□□□□ -0.06
VTI1A-208ENST00000494728 RIPOR2Q9Y4F9 1068 aa14.7□□□□□ -0.06
VTI1A-208ENST00000494728 COL1A1P02452 1464 aaPredicted RBP14.69□□□□□ -0.06
VTI1A-208ENST00000494728 CA12O43570 354 aa14.69□□□□□ -0.06
VTI1A-208ENST00000494728 VGLL2Q8N8G2 317 aa14.69□□□□□ -0.06
VTI1A-208ENST00000494728 CCDC102AQ96A19 550 aa14.69□□□□□ -0.06
VTI1A-208ENST00000494728 FAM84BQ96KN1 310 aaPredicted RBP14.69□□□□□ -0.06
VTI1A-208ENST00000494728 BRCA2P51587 3418 aa14.69□□□□□ -0.06
VTI1A-208ENST00000494728 FKBP1BP68106 108 aa14.68□□□□□ -0.06
VTI1A-208ENST00000494728 GRIK5Q16478 980 aa14.68□□□□□ -0.06
VTI1A-208ENST00000494728 MTMR14Q8NCE2 650 aa14.68□□□□□ -0.06
VTI1A-208ENST00000494728 CSRNP1Q96S65 589 aa14.68□□□□□ -0.06
VTI1A-208ENST00000494728 SMC4Q9NTJ3 1288 aa14.68□□□□□ -0.06
VTI1A-208ENST00000494728 RNF186Q9NXI6 227 aa14.68□□□□□ -0.06
VTI1A-208ENST00000494728 HDAC9Q9UKV0 1011 aa14.68□□□□□ -0.06
VTI1A-208ENST00000494728 FAM205AQ6ZU69 1335 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 CLRN2A0PK11 232 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 SPDYE2BA6NHP3 402 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 SPDYE6P0CI01 402 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 RFX5P48382 616 aaPredicted RBP14.67□□□□□ -0.06
VTI1A-208ENST00000494728 PRKG1Q13976 671 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 UBE4AQ14139 1066 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 ALDH1L2Q3SY69 923 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 CFAP100Q494V2 611 aa14.67□□□□□ -0.06
VTI1A-208ENST00000494728 APOBEC3FQ8IUX4 373 aaKnown RBP14.67□□□□□ -0.06
VTI1A-208ENST00000494728 TDRD7Q8NHU6 1098 aaKnown RBP14.67□□□□□ -0.06
VTI1A-208ENST00000494728 PRMT6Q96LA8 375 aaPredicted RBP14.67□□□□□ -0.06
VTI1A-208ENST00000494728 IQSEC3Q9UPP2 1182 aaPredicted RBP14.67□□□□□ -0.06
VTI1A-208ENST00000494728 MROH5Q6ZUA9 1318 aa14.66□□□□□ -0.06
VTI1A-208ENST00000494728 FKBP1AP62942 108 aaKnown RBP14.66□□□□□ -0.06
VTI1A-208ENST00000494728 DLGAP5Q15398 846 aa14.66□□□□□ -0.06
VTI1A-208ENST00000494728 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 TRPA1O75762 1119 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 HIBADHP31937 336 aaKnown RBP14.65□□□□□ -0.06
VTI1A-208ENST00000494728 MMP14P50281 582 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 PTPN12Q05209 780 aaKnown RBP14.65□□□□□ -0.06
VTI1A-208ENST00000494728 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
VTI1A-208ENST00000494728 TTLL12Q14166 644 aaPredicted RBP14.65□□□□□ -0.06
VTI1A-208ENST00000494728 MFSD14BQ5SR56 506 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 CDAN1Q8IWY9 1227 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 MCOLN1Q9GZU1 580 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 DEFB129Q9H1M3 183 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 SAGE1Q9NXZ1 904 aa14.65□□□□□ -0.06
VTI1A-208ENST00000494728 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
VTI1A-208ENST00000494728 FBXO33Q7Z6M2 555 aa14.64□□□□□ -0.07
VTI1A-208ENST00000494728 MKI67P46013 3256 aaKnown RBP14.63□□□□□ -0.07
VTI1A-208ENST00000494728 PDE8BO95263 885 aa14.63□□□□□ -0.07
VTI1A-208ENST00000494728 FGFR2P21802 821 aa14.63□□□□□ -0.07
VTI1A-208ENST00000494728 LDLRAD1Q5T700 205 aa14.63□□□□□ -0.07
VTI1A-208ENST00000494728 CLMNQ96JQ2 1002 aa14.63□□□□□ -0.07
VTI1A-208ENST00000494728 VEZTQ9HBM0 779 aa14.63□□□□□ -0.07
VTI1A-208ENST00000494728 NOB1Q9ULX3 412 aaKnown RBP14.63□□□□□ -0.07
VTI1A-208ENST00000494728 ANGEL1Q9UNK9 670 aaKnown RBP14.63□□□□□ -0.07
VTI1A-208ENST00000494728 TTF2Q9UNY4 1162 aaKnown RBP14.63□□□□□ -0.07
VTI1A-208ENST00000494728 BCAMP50895 628 aa14.62□□□□□ -0.07
VTI1A-208ENST00000494728 DGKZQ13574 1117 aa14.62□□□□□ -0.07
VTI1A-208ENST00000494728 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
VTI1A-208ENST00000494728 ATG9AQ7Z3C6 839 aa14.62□□□□□ -0.07
VTI1A-208ENST00000494728 TNNQ9UQP3 1299 aa14.62□□□□□ -0.07
VTI1A-208ENST00000494728 NF2P35240 595 aa14.61□□□□□ -0.07
VTI1A-208ENST00000494728 RBM5P52756 815 aaKnown RBP eCLIP14.61□□□□□ -0.07
VTI1A-208ENST00000494728 RARSP54136 660 aaKnown RBP14.61□□□□□ -0.07
VTI1A-208ENST00000494728 CHAF1AQ13111 956 aaPredicted RBP14.61□□□□□ -0.07
VTI1A-208ENST00000494728 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
VTI1A-208ENST00000494728 MEIS3Q99687 375 aa14.61□□□□□ -0.07
VTI1A-208ENST00000494728 TDRD3Q9H7E2 651 aaKnown RBP14.61□□□□□ -0.07
VTI1A-208ENST00000494728 LRRFIP2Q9Y608 721 aaKnown RBP14.61□□□□□ -0.07
VTI1A-208ENST00000494728 PDE4DIPQ5VU43 2346 aa14.61□□□□□ -0.07
VTI1A-208ENST00000494728 MYH2Q9UKX2 1941 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 CCDC85CA6NKD9 419 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 EYA2O00167 538 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 CT47B1P0C2W7 299 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-208ENST00000494728 CRKP46108 304 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 RASA3Q14644 834 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 PUM3Q15397 648 aaKnown RBP14.6□□□□□ -0.07
VTI1A-208ENST00000494728 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 SIL1Q9H173 461 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 ZNF70Q9UC06 446 aaPredicted RBP14.6□□□□□ -0.07
VTI1A-208ENST00000494728 SERPINA10Q9UK55 444 aa14.6□□□□□ -0.07
VTI1A-208ENST00000494728 TBC1D8O95759 1140 aa14.59□□□□□ -0.07
VTI1A-208ENST00000494728 UBTFL1P0CB47 393 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms