RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TDRD7Q8NHU6 1098 aaKnown RBP13.71□□□□□ -0.21
APTX-230ENST00000494649 L3MBTL3Q96JM7 780 aaPredicted RBP13.71□□□□□ -0.21
APTX-230ENST00000494649 GPRC5DQ9NZD1 345 aa13.71□□□□□ -0.21
APTX-230ENST00000494649 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
APTX-230ENST00000494649 TBC1D10BQ4KMP7 808 aaPredicted RBP13.7□□□□□ -0.22
APTX-230ENST00000494649 STRIP1Q5VSL9 837 aa13.7□□□□□ -0.22
APTX-230ENST00000494649 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
APTX-230ENST00000494649 TAF1DQ9H5J8 278 aaPredicted RBP13.7□□□□□ -0.22
APTX-230ENST00000494649 WDR90Q96KV7 1748 aa13.7□□□□□ -0.22
APTX-230ENST00000494649 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
APTX-230ENST00000494649 GRIK5Q16478 980 aa13.7□□□□□ -0.22
APTX-230ENST00000494649 MFSD14BQ5SR56 506 aa13.7□□□□□ -0.22
APTX-230ENST00000494649 TRPM4Q8TD43 1214 aa13.7□□□□□ -0.22
APTX-230ENST00000494649 COL1A1P02452 1464 aaPredicted RBP13.69□□□□□ -0.22
APTX-230ENST00000494649 IQCA1LA6NCM1 817 aa13.69□□□□□ -0.22
APTX-230ENST00000494649 HSP90AB4PQ58FF6 505 aa13.69□□□□□ -0.22
APTX-230ENST00000494649 ERC1Q8IUD2 1116 aa13.69□□□□□ -0.22
APTX-230ENST00000494649 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
APTX-230ENST00000494649 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
APTX-230ENST00000494649 RASGRF1Q13972 1273 aa13.68□□□□□ -0.22
APTX-230ENST00000494649 SCARF1Q14162 830 aa13.68□□□□□ -0.22
APTX-230ENST00000494649 KIF1BPQ96EK5 621 aa13.68□□□□□ -0.22
APTX-230ENST00000494649 SNRKQ9NRH2 765 aa13.68□□□□□ -0.22
APTX-230ENST00000494649 SCAF8Q9UPN6 1271 aaKnown RBP13.68□□□□□ -0.22
APTX-230ENST00000494649 PCDHAC2Q9Y5I4 1007 aa13.68□□□□□ -0.22
APTX-230ENST00000494649 NDUFB9Q9Y6M9 179 aa13.68□□□□□ -0.22
APTX-230ENST00000494649 IGHDP01880 384 aa13.68□□□□□ -0.22
APTX-230ENST00000494649 H7C1D1 291 aa13.67□□□□□ -0.22
APTX-230ENST00000494649 USP17L8P0C7I0 530 aa13.67□□□□□ -0.22
APTX-230ENST00000494649 B4GALNT3Q6L9W6 998 aa13.67□□□□□ -0.22
APTX-230ENST00000494649 CLASRPQ8N2M8 674 aaKnown RBP13.67□□□□□ -0.22
APTX-230ENST00000494649 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
APTX-230ENST00000494649 DCTPP1Q9H773 170 aa13.67□□□□□ -0.22
APTX-230ENST00000494649 ASTN2O75129 1339 aaPredicted RBP13.67□□□□□ -0.22
APTX-230ENST00000494649 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
APTX-230ENST00000494649 TTC39AQ5SRH9 613 aa13.67□□□□□ -0.22
APTX-230ENST00000494649 GMLQ99445 158 aa13.67□□□□□ -0.22
APTX-230ENST00000494649 GNL3LQ9NVN8 582 aaKnown RBP13.67□□□□□ -0.22
APTX-230ENST00000494649 ZNF646O15015 1829 aaPredicted RBP13.66□□□□□ -0.22
APTX-230ENST00000494649 ARAP2Q8WZ64 1704 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 PSME4Q14997 1843 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 RAB11FIP3O75154 756 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 IFIT2P09913 472 aaKnown RBP13.66□□□□□ -0.22
APTX-230ENST00000494649 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
APTX-230ENST00000494649 TSHZ3Q63HK5 1081 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 MAP1SQ66K74 1059 aaPredicted RBP13.66□□□□□ -0.22
APTX-230ENST00000494649 TBC1D9Q6ZT07 1266 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 AGBL3Q8NEM8 1001 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 DPF2Q92785 391 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 ADARB2Q9NS39 739 aaKnown RBP13.66□□□□□ -0.22
APTX-230ENST00000494649 ABCF2Q9UG63 623 aa13.66□□□□□ -0.22
APTX-230ENST00000494649 MCAMP43121 646 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 KIF4BQ2VIQ3 1234 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 CCDC158Q5M9N0 1113 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 OGFOD1Q8N543 542 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 TTF2Q9UNY4 1162 aaKnown RBP13.65□□□□□ -0.22
APTX-230ENST00000494649 SCN4AP35499 1836 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 PRDX5P30044 214 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
APTX-230ENST00000494649 DLK2Q6UY11 383 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 MYOZ2Q9NPC6 264 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 HMG20BQ9P0W2 317 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 FAM205AQ6ZU69 1335 aa13.65□□□□□ -0.22
APTX-230ENST00000494649 TOMM70O94826 608 aa13.64□□□□□ -0.23
APTX-230ENST00000494649 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
APTX-230ENST00000494649 SPATA5Q8NB90 893 aa13.64□□□□□ -0.23
APTX-230ENST00000494649 MYH13Q9UKX3 1938 aa13.64□□□□□ -0.23
APTX-230ENST00000494649 FMR1Q06787 632 aaKnown RBP eCLIP13.63□□□□□ -0.23
APTX-230ENST00000494649 HDAC1Q13547 482 aaPredicted RBP13.63□□□□□ -0.23
APTX-230ENST00000494649 NBPF9Q3BBW0 867 aa13.63□□□□□ -0.23
APTX-230ENST00000494649 PNMA8AQ86V59 439 aaPredicted RBP13.63□□□□□ -0.23
APTX-230ENST00000494649 OTUD7AQ8TE49 926 aaPredicted RBP13.63□□□□□ -0.23
APTX-230ENST00000494649 DENND2AQ9ULE3 1009 aa13.63□□□□□ -0.23
APTX-230ENST00000494649 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
APTX-230ENST00000494649 ADAMTSL1Q8N6G6 1762 aa13.63□□□□□ -0.23
APTX-230ENST00000494649 AOX1Q06278 1338 aa13.63□□□□□ -0.23
APTX-230ENST00000494649 RWDD1Q9H446 243 aaPredicted RBP13.63□□□□□ -0.23
APTX-230ENST00000494649 ARID4AP29374 1257 aaPredicted RBP13.62□□□□□ -0.23
APTX-230ENST00000494649 ZAP70P43403 619 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 ZNF280AP59817 542 aaPredicted RBP13.62□□□□□ -0.23
APTX-230ENST00000494649 DIXDC1Q155Q3 683 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 USP50Q70EL3 339 aaPredicted RBP13.62□□□□□ -0.23
APTX-230ENST00000494649 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 LDHDQ86WU2 507 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 WDR66Q8TBY9 1149 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 TBC1D22AQ8WUA7 517 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 EDC3Q96F86 508 aaKnown RBP13.62□□□□□ -0.23
APTX-230ENST00000494649 DNAJC2Q99543 621 aaKnown RBP13.62□□□□□ -0.23
APTX-230ENST00000494649 GGA3Q9NZ52 723 aa13.62□□□□□ -0.23
APTX-230ENST00000494649 CLRN2A0PK11 232 aa13.61□□□□□ -0.23
APTX-230ENST00000494649 WNT10BO00744 389 aa13.61□□□□□ -0.23
APTX-230ENST00000494649 AAMPQ13685 434 aa13.61□□□□□ -0.23
APTX-230ENST00000494649 ANGEL2Q5VTE6 544 aaKnown RBP13.61□□□□□ -0.23
APTX-230ENST00000494649 LNPKQ9C0E8 428 aa13.61□□□□□ -0.23
APTX-230ENST00000494649 BOLA2Q9H3K6 86 aa13.61□□□□□ -0.23
APTX-230ENST00000494649 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
APTX-230ENST00000494649 TRAF5O00463 557 aa13.6□□□□□ -0.23
APTX-230ENST00000494649 SEMA3EO15041 775 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms