RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SIK1P57059 783 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 CABP4P57796 275 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 GTF2IP78347 998 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 C1orf141Q5JVX7 400 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 VRTNQ9H8Y1 702 aa10.88□□□□□ -0.67
RIF1-211ENST00000494333 CLDN10P78369 228 aa10.87□□□□□ -0.67
RIF1-211ENST00000494333 C6orf118Q5T5N4 469 aa10.87□□□□□ -0.67
RIF1-211ENST00000494333 TRIM50Q86XT4 487 aa10.87□□□□□ -0.67
RIF1-211ENST00000494333 FLAD1Q8NFF5 587 aa10.87□□□□□ -0.67
RIF1-211ENST00000494333 PURBQ96QR8 312 aaKnown RBP10.87□□□□□ -0.67
RIF1-211ENST00000494333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.86□□□□□ -0.67
RIF1-211ENST00000494333 STAU1O95793 577 aaKnown RBP10.86□□□□□ -0.67
RIF1-211ENST00000494333 GNRH1P01148 92 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 BMP2P12643 396 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 ITPK1Q13572 414 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 SMIM5Q71RC9 77 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 OGFOD1Q8N543 542 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 KDRP35968 1356 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 NPC1L1Q9UHC9 1359 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 PKD1L3Q7Z443 1732 aa10.86□□□□□ -0.67
RIF1-211ENST00000494333 LY75O60449 1722 aa10.85□□□□□ -0.67
RIF1-211ENST00000494333 A0A1W2PRU2 124 aa10.85□□□□□ -0.67
RIF1-211ENST00000494333 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
RIF1-211ENST00000494333 ZBTB7BO15156 539 aaPredicted RBP10.85□□□□□ -0.67
RIF1-211ENST00000494333 RASA1P20936 1047 aa10.85□□□□□ -0.67
RIF1-211ENST00000494333 SCARF1Q14162 830 aa10.85□□□□□ -0.67
RIF1-211ENST00000494333 MSL1Q68DK7 614 aa10.85□□□□□ -0.67
RIF1-211ENST00000494333 LINC00116Q8NCU8 138 aa10.85□□□□□ -0.67
RIF1-211ENST00000494333 ZFP42Q96MM3 310 aa10.85□□□□□ -0.67
RIF1-211ENST00000494333 SPINT1O43278 529 aa10.84□□□□□ -0.67
RIF1-211ENST00000494333 ATP1A2P50993 1020 aa10.84□□□□□ -0.67
RIF1-211ENST00000494333 AKAP4Q5JQC9 854 aa10.84□□□□□ -0.67
RIF1-211ENST00000494333 AMIGO3Q86WK7 504 aa10.84□□□□□ -0.67
RIF1-211ENST00000494333 LGR6Q9HBX8 967 aa10.84□□□□□ -0.67
RIF1-211ENST00000494333 RAB6BQ9NRW1 208 aa10.84□□□□□ -0.67
RIF1-211ENST00000494333 DNAAF2Q9NVR5 837 aaKnown RBP10.84□□□□□ -0.67
RIF1-211ENST00000494333 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
RIF1-211ENST00000494333 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
RIF1-211ENST00000494333 SCNN1DP51172 638 aa10.83□□□□□ -0.68
RIF1-211ENST00000494333 MTHFSDQ2M296 383 aaKnown RBP10.83□□□□□ -0.68
RIF1-211ENST00000494333 ZNF594Q96JF6 807 aaPredicted RBP10.83□□□□□ -0.68
RIF1-211ENST00000494333 SLC4A9Q96Q91 983 aa10.83□□□□□ -0.68
RIF1-211ENST00000494333 INSM2Q96T92 566 aaPredicted RBP10.83□□□□□ -0.68
RIF1-211ENST00000494333 ETNK1Q9HBU6 452 aa10.83□□□□□ -0.68
RIF1-211ENST00000494333 TOGARAM1Q9Y4F4 1720 aa10.83□□□□□ -0.68
RIF1-211ENST00000494333 KDM6AO15550 1401 aaPredicted RBP10.83□□□□□ -0.68
RIF1-211ENST00000494333 YY1P25490 414 aa10.82□□□□□ -0.68
RIF1-211ENST00000494333 SSFA2P28290 1259 aa10.82□□□□□ -0.68
RIF1-211ENST00000494333 CRTC2Q53ET0 693 aaPredicted RBP10.82□□□□□ -0.68
RIF1-211ENST00000494333 PBXIP1Q96AQ6 731 aa10.82□□□□□ -0.68
RIF1-211ENST00000494333 CFAP53Q96M91 514 aa10.82□□□□□ -0.68
RIF1-211ENST00000494333 TMEM229AB2RXF0 380 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 MEN1O00255 615 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 RNMTO43148 476 aaKnown RBP10.81□□□□□ -0.68
RIF1-211ENST00000494333 IL2RAP01589 272 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 GDF10P55107 478 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 CLN3Q13286 438 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 PTK7Q13308 1070 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 TRAPPC3LQ5T215 181 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 CCDC102BQ68D86 513 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 TPCN2Q8NHX9 752 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 SLC52A2Q9HAB3 445 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 GMPR2Q9P2T1 348 aaKnown RBP10.81□□□□□ -0.68
RIF1-211ENST00000494333 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
RIF1-211ENST00000494333 ITGB4P16144 1822 aa10.81□□□□□ -0.68
RIF1-211ENST00000494333 MAP3K5Q99683 1374 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 FAM196BA6NMK8 535 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L15C9J2P7 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L10C9JJH3 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L13C9JLJ4 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L12C9JPN9 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L11C9JVI0 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L21D6R901 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L18D6R9N7 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L22D6RA61 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L17D6RBQ6 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L19D6RCP7 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L20D6RJB6 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 PPP2R1AP30153 589 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 CTSOP43234 321 aaPredicted RBP10.8□□□□□ -0.68
RIF1-211ENST00000494333 USP17L24Q0WX57 530 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 GPR162Q16538 588 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 CNKSR1Q969H4 720 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 XAGE2Q96GT9 111 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 POLMQ9NP87 494 aaPredicted RBP10.8□□□□□ -0.68
RIF1-211ENST00000494333 NUDCQ9Y266 331 aa10.8□□□□□ -0.68
RIF1-211ENST00000494333 DKK1O94907 266 aa10.79□□□□□ -0.68
RIF1-211ENST00000494333 INHAP05111 366 aa10.79□□□□□ -0.68
RIF1-211ENST00000494333 SLC39A6Q13433 755 aa10.79□□□□□ -0.68
RIF1-211ENST00000494333 SIX5Q8N196 739 aa10.79□□□□□ -0.68
RIF1-211ENST00000494333 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.79□□□□□ -0.68
RIF1-211ENST00000494333 NLGN2Q8NFZ4 835 aa10.79□□□□□ -0.68
RIF1-211ENST00000494333 ESYT1Q9BSJ8 1104 aa10.79□□□□□ -0.68
RIF1-211ENST00000494333 C4BP0C0L5 1744 aa10.78□□□□□ -0.68
RIF1-211ENST00000494333 RPS6KA4O75676 772 aa10.78□□□□□ -0.68
RIF1-211ENST00000494333 NLRP3Q96P20 1036 aa10.78□□□□□ -0.68
RIF1-211ENST00000494333 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
RIF1-211ENST00000494333 C5P01031 1676 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms