RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
SATB1-217ENST00000493952 DNAJC5GQ8N7S2 189 aa20.07■□□□□ 0.8
SATB1-217ENST00000493952 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
SATB1-217ENST00000493952 BCAMP50895 628 aa20.06■□□□□ 0.8
SATB1-217ENST00000493952 ATP8B2P98198 1209 aa20.06■□□□□ 0.8
SATB1-217ENST00000493952 POLA2Q14181 598 aa20.06■□□□□ 0.8
SATB1-217ENST00000493952 ATP2B3Q16720 1220 aa20.06■□□□□ 0.8
SATB1-217ENST00000493952 OGFOD1Q8N543 542 aa20.06■□□□□ 0.8
SATB1-217ENST00000493952 CREBZFQ9NS37 354 aa20.06■□□□□ 0.8
SATB1-217ENST00000493952 COG6Q9Y2V7 657 aa20.06■□□□□ 0.8
SATB1-217ENST00000493952 FKBP1AP62942 108 aaKnown RBP20.05■□□□□ 0.8
SATB1-217ENST00000493952 SSH3Q8TE77 659 aa20.05■□□□□ 0.8
SATB1-217ENST00000493952 TMEM88BA6NKF7 163 aa20.04■□□□□ 0.8
SATB1-217ENST00000493952 TFCP2Q12800 502 aa20.04■□□□□ 0.8
SATB1-217ENST00000493952 SCARF1Q14162 830 aa20.04■□□□□ 0.8
SATB1-217ENST00000493952 C20orf194Q5TEA3 1177 aa20.04■□□□□ 0.8
SATB1-217ENST00000493952 CDC37L1Q7L3B6 337 aa20.04■□□□□ 0.8
SATB1-217ENST00000493952 GGA3Q9NZ52 723 aa20.04■□□□□ 0.8
SATB1-217ENST00000493952 DDX19BQ9UMR2 479 aa20.04■□□□□ 0.8
SATB1-217ENST00000493952 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
SATB1-217ENST00000493952 COL1A1P02452 1464 aaPredicted RBP20.04■□□□□ 0.8
SATB1-217ENST00000493952 F8W031 263 aaPredicted RBP20.03■□□□□ 0.8
SATB1-217ENST00000493952 NBPF9Q3BBW0 867 aa20.03■□□□□ 0.8
SATB1-217ENST00000493952 MFSD14BQ5SR56 506 aa20.03■□□□□ 0.8
SATB1-217ENST00000493952 USP48Q86UV5 1035 aa20.03■□□□□ 0.8
SATB1-217ENST00000493952 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.03■□□□□ 0.8
SATB1-217ENST00000493952 DCPSQ96C86 337 aaKnown RBP20.03■□□□□ 0.8
SATB1-217ENST00000493952 HDAC9Q9UKV0 1011 aa20.03■□□□□ 0.8
SATB1-217ENST00000493952 ADM5C9JUS6 153 aa20.02■□□□□ 0.8
SATB1-217ENST00000493952 MMP14P50281 582 aa20.02■□□□□ 0.8
SATB1-217ENST00000493952 ANGEL2Q5VTE6 544 aaKnown RBP20.02■□□□□ 0.8
SATB1-217ENST00000493952 CEP85Q6P2H3 762 aa20.02■□□□□ 0.8
SATB1-217ENST00000493952 DLK2Q6UY11 383 aa20.02■□□□□ 0.8
SATB1-217ENST00000493952 KRT26Q7Z3Y9 468 aa20.02■□□□□ 0.8
SATB1-217ENST00000493952 KLRG1Q96E93 195 aa20.02■□□□□ 0.8
SATB1-217ENST00000493952 MYH2Q9UKX2 1941 aa20.02■□□□□ 0.79
SATB1-217ENST00000493952 WNT10BO00744 389 aa20.01■□□□□ 0.79
SATB1-217ENST00000493952 FRAT2O75474 233 aaPredicted RBP20.01■□□□□ 0.79
SATB1-217ENST00000493952 ADORA1P30542 326 aa20.01■□□□□ 0.79
SATB1-217ENST00000493952 CHAF1AQ13111 956 aaPredicted RBP20.01■□□□□ 0.79
SATB1-217ENST00000493952 G3BP1Q13283 466 aaKnown RBP eCLIP20.01■□□□□ 0.79
SATB1-217ENST00000493952 PDE3AQ14432 1141 aa20.01■□□□□ 0.79
SATB1-217ENST00000493952 CST9Q5W186 159 aa20.01■□□□□ 0.79
SATB1-217ENST00000493952 ZBED3Q96IU2 234 aaPredicted RBP20.01■□□□□ 0.79
SATB1-217ENST00000493952 AKAP11Q9UKA4 1901 aa20.01■□□□□ 0.79
SATB1-217ENST00000493952 MYO5AQ9Y4I1 1855 aaKnown RBP20.01■□□□□ 0.79
SATB1-217ENST00000493952 A0A1B0GUL7 405 aa20■□□□□ 0.79
SATB1-217ENST00000493952 TIMM10P62072 90 aa20■□□□□ 0.79
SATB1-217ENST00000493952 ZBTB40Q9NUA8 1239 aa20■□□□□ 0.79
SATB1-217ENST00000493952 PCDHAC2Q9Y5I4 1007 aa20■□□□□ 0.79
SATB1-217ENST00000493952 PITPNM2Q9BZ72 1349 aa20■□□□□ 0.79
SATB1-217ENST00000493952 PHKA1P46020 1223 aa19.99■□□□□ 0.79
SATB1-217ENST00000493952 GRIK5Q16478 980 aa19.99■□□□□ 0.79
SATB1-217ENST00000493952 SULF1Q8IWU6 871 aa19.99■□□□□ 0.79
SATB1-217ENST00000493952 AKAP2Q9Y2D5 859 aa19.99■□□□□ 0.79
SATB1-217ENST00000493952 SURF6O75683 361 aaKnown RBP19.98■□□□□ 0.79
SATB1-217ENST00000493952 CELF2O95319 508 aaKnown RBP19.98■□□□□ 0.79
SATB1-217ENST00000493952 MTMR14Q8NCE2 650 aa19.98■□□□□ 0.79
SATB1-217ENST00000493952 TBC1D22AQ8WUA7 517 aa19.98■□□□□ 0.79
SATB1-217ENST00000493952 ZNF408Q9H9D4 720 aa19.98■□□□□ 0.79
SATB1-217ENST00000493952 MKRN1Q9UHC7 482 aaKnown RBP19.98■□□□□ 0.79
SATB1-217ENST00000493952 TTF2Q9UNY4 1162 aaKnown RBP19.98■□□□□ 0.79
SATB1-217ENST00000493952 SCAF8Q9UPN6 1271 aaKnown RBP19.98■□□□□ 0.79
SATB1-217ENST00000493952 THSD7BQ9C0I4 1608 aa19.98■□□□□ 0.79
SATB1-217ENST00000493952 CNTNAP1P78357 1384 aa19.97■□□□□ 0.79
SATB1-217ENST00000493952 DLGAP5Q15398 846 aa19.97■□□□□ 0.79
SATB1-217ENST00000493952 CFAP100Q494V2 611 aa19.97■□□□□ 0.79
SATB1-217ENST00000493952 CCDC102BQ68D86 513 aa19.97■□□□□ 0.79
SATB1-217ENST00000493952 XAGE2Q96GT9 111 aa19.97■□□□□ 0.79
SATB1-217ENST00000493952 ABT1Q9ULW3 272 aaKnown RBP19.97■□□□□ 0.79
SATB1-217ENST00000493952 NOP58Q9Y2X3 529 aaKnown RBP19.97■□□□□ 0.79
SATB1-217ENST00000493952 OS9Q13438 667 aaPredicted RBP19.96■□□□□ 0.79
SATB1-217ENST00000493952 NEUROD6Q96NK8 337 aa19.96■□□□□ 0.79
SATB1-217ENST00000493952 GNL3LQ9NVN8 582 aaKnown RBP19.96■□□□□ 0.79
SATB1-217ENST00000493952 AOX1Q06278 1338 aa19.96■□□□□ 0.79
SATB1-217ENST00000493952 PAPPA2Q9BXP8 1791 aa19.95■□□□□ 0.78
SATB1-217ENST00000493952 SPDYE2BA6NHP3 402 aa19.95■□□□□ 0.78
SATB1-217ENST00000493952 RASSF10A6NK89 507 aa19.95■□□□□ 0.78
SATB1-217ENST00000493952 SPDYE6P0CI01 402 aa19.95■□□□□ 0.78
SATB1-217ENST00000493952 CDCA5Q96FF9 252 aa19.95■□□□□ 0.78
SATB1-217ENST00000493952 PRMT6Q96LA8 375 aaPredicted RBP19.95■□□□□ 0.78
SATB1-217ENST00000493952 CHMP4BQ9H444 224 aaKnown RBP19.95■□□□□ 0.78
SATB1-217ENST00000493952 MAST2Q6P0Q8 1798 aa19.94■□□□□ 0.78
SATB1-217ENST00000493952 SEMA3EO15041 775 aa19.94■□□□□ 0.78
SATB1-217ENST00000493952 RBM5P52756 815 aaKnown RBP eCLIP19.94■□□□□ 0.78
SATB1-217ENST00000493952 RRP1P56182 461 aaKnown RBP19.94■□□□□ 0.78
SATB1-217ENST00000493952 RPAP2Q8IXW5 612 aaPredicted RBP19.94■□□□□ 0.78
SATB1-217ENST00000493952 WDR66Q8TBY9 1149 aa19.94■□□□□ 0.78
SATB1-217ENST00000493952 SERPINA10Q9UK55 444 aa19.94■□□□□ 0.78
SATB1-217ENST00000493952 TLL2Q9Y6L7 1015 aa19.94■□□□□ 0.78
SATB1-217ENST00000493952 ZBTB22O15209 634 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 TNNI3KQ59H18 835 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 APOBEC3FQ8IUX4 373 aaKnown RBP19.93■□□□□ 0.78
SATB1-217ENST00000493952 SIRT2Q8IXJ6 389 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 JMYQ8N9B5 988 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 GPR108Q9NPR9 543 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 DENND2AQ9ULE3 1009 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 EXOC6BQ9Y2D4 811 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 FPGT-TNNI3KV9GXZ4 949 aa19.93■□□□□ 0.78
SATB1-217ENST00000493952 CRKP46108 304 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms