RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 NTSR2O95665 410 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 CCDC102BQ68D86 513 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 TTLL5Q6EMB2 1281 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 LPIN2Q92539 896 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.194e-6■■□□□ 13.6
VCP-207ENST00000493886 PUS7LQ9H0K6 701 aaKnown RBP16.26■□□□□ 0.19
VCP-207ENST00000493886 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
VCP-207ENST00000493886 BCL9LQ86UU0 1499 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 OFD1O75665 1012 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 FGFR2P21802 821 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 PHKA1P46020 1223 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 SEC31BQ9NQW1 1179 aa16.26■□□□□ 0.19
VCP-207ENST00000493886 FOXP2O15409 715 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 ARID4AP29374 1257 aaPredicted RBP16.25■□□□□ 0.19
VCP-207ENST00000493886 EXOSC10Q01780 885 aaKnown RBP16.25■□□□□ 0.19
VCP-207ENST00000493886 TTF1Q15361 905 aaPredicted RBP16.25■□□□□ 0.19
VCP-207ENST00000493886 TMEM51Q9NW97 253 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 CTNNA3Q9UI47 895 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
VCP-207ENST00000493886 DDX60Q8IY21 1712 aaKnown RBP16.25■□□□□ 0.19
VCP-207ENST00000493886 CCDC152Q4G0S7 254 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 ZNF652Q9Y2D9 606 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 UQCRFS1P1P0C7P4 283 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 DNM1Q05193 864 aaKnown RBP16.25■□□□□ 0.19
VCP-207ENST00000493886 ZSCAN25Q6NSZ9 544 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 LINC00116Q8NCU8 138 aa16.25■□□□□ 0.19
VCP-207ENST00000493886 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
VCP-207ENST00000493886 ADD2P35612 726 aa16.24■□□□□ 0.19
VCP-207ENST00000493886 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
VCP-207ENST00000493886 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
VCP-207ENST00000493886 AGXT2Q9BYV1 514 aa16.24■□□□□ 0.19
VCP-207ENST00000493886 ZKSCAN5Q9Y2L8 839 aa16.24■□□□□ 0.19
VCP-207ENST00000493886 GPAA1O43292 621 aa16.24■□□□□ 0.19
VCP-207ENST00000493886 SLC5A1P13866 664 aa16.24■□□□□ 0.19
VCP-207ENST00000493886 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
VCP-207ENST00000493886 JAK2O60674 1132 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 FGAP02671 866 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
VCP-207ENST00000493886 PLCB2Q00722 1185 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 IMMTQ16891 758 aaKnown RBP16.23■□□□□ 0.19
VCP-207ENST00000493886 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 BCCIPQ9P287 314 aaKnown RBP eCLIP16.23■□□□□ 0.19
VCP-207ENST00000493886 PFKFB2O60825 505 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 UBE2HP62256 183 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 SCRN1Q12765 414 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 CSPP1Q1MSJ5 1256 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 CLEC4GQ6UXB4 293 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 RTL9Q8NET4 1388 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 ARAP2Q8WZ64 1704 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 USP25Q9UHP3 1055 aa16.23■□□□□ 0.19
VCP-207ENST00000493886 IDH1O75874 414 aaKnown RBP16.22■□□□□ 0.19
VCP-207ENST00000493886 IGHMBP2P38935 993 aaKnown RBP16.22■□□□□ 0.19
VCP-207ENST00000493886 APOBRQ0VD83 1088 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 ARID3AQ99856 593 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 BCORQ6W2J9 1755 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 HAND2P61296 217 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 FERMT3Q86UX7 667 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 LAMB2P55268 1798 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 SNAP23O00161 211 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 TPM2P07951 284 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 KCNQ4P56696 695 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
VCP-207ENST00000493886 MYO5AQ9Y4I1 1855 aaKnown RBP16.21■□□□□ 0.19
VCP-207ENST00000493886 CHST3Q7LGC8 479 aa16.21■□□□□ 0.19
VCP-207ENST00000493886 FNBP4Q8N3X1 1017 aaPredicted RBP16.21■□□□□ 0.19
VCP-207ENST00000493886 ATRNO75882 1429 aa16.21■□□□□ 0.19
VCP-207ENST00000493886 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.18
VCP-207ENST00000493886 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
VCP-207ENST00000493886 PTF1AQ7RTS3 328 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 CCDC39Q9UFE4 941 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 CNTNAP4Q9C0A0 1308 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 PDE6AP16499 860 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 HS1BP3Q53T59 392 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
VCP-207ENST00000493886 PHF14O94880 888 aa16.19■□□□□ 0.18
VCP-207ENST00000493886 KRT85P78386 507 aa16.19■□□□□ 0.18
VCP-207ENST00000493886 DDX11Q96FC9 970 aa16.19■□□□□ 0.18
VCP-207ENST00000493886 RASGRF1Q13972 1273 aa16.19■□□□□ 0.18
VCP-207ENST00000493886 GIMAP6Q6P9H5 292 aa16.19■□□□□ 0.18
VCP-207ENST00000493886 FBXL16Q8N461 479 aa16.19■□□□□ 0.18
VCP-207ENST00000493886 NSUN7Q8NE18 718 aaKnown RBP16.19■□□□□ 0.18
VCP-207ENST00000493886 FAM13BQ9NYF5 915 aa16.19■□□□□ 0.18
VCP-207ENST00000493886 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
VCP-207ENST00000493886 ZNF213O14771 459 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 FAM173BQ6P4H8 233 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 ZNF274Q96GC6 653 aaPredicted RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 ZNF500O60304 480 aaPredicted RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 CCT2P78371 535 aaKnown RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 CHRNDQ07001 517 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 ERFEQ4G0M1 354 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 C17orf53Q8N3J3 647 aaPredicted RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 FAM184AQ8NB25 1140 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms