RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SPATA5Q8NB90 893 aa9.27□□□□□ -0.93
VEGFA-214ENST00000493786 ZNF512BQ96KM6 892 aaPredicted RBP9.27□□□□□ -0.93
VEGFA-214ENST00000493786 ARAP2Q8WZ64 1704 aa9.27□□□□□ -0.93
VEGFA-214ENST00000493786 PDS5AQ29RF7 1337 aaKnown RBP9.27□□□□□ -0.93
VEGFA-214ENST00000493786 TTC41PQ6P2S7 1318 aa9.27□□□□□ -0.93
VEGFA-214ENST00000493786 ZNF541Q9H0D2 1346 aa9.27□□□□□ -0.93
VEGFA-214ENST00000493786 GLRX3O76003 335 aaKnown RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 VIL1P09327 827 aaKnown RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 RPS12P25398 132 aaKnown RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 LMOD1P29536 600 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 TTF1Q15361 905 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 MFSD14BQ5SR56 506 aa9.26□□□□□ -0.93
VEGFA-214ENST00000493786 SPTY2D1Q68D10 685 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 C16orf71Q8IYS4 520 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 DNAJC2Q99543 621 aaKnown RBP9.26□□□□□ -0.93
VEGFA-214ENST00000493786 JAG2Q9Y219 1238 aa9.26□□□□□ -0.93
VEGFA-214ENST00000493786 FAM205AQ6ZU69 1335 aa9.26□□□□□ -0.93
VEGFA-214ENST00000493786 COL4A5P29400 1685 aa9.26□□□□□ -0.93
VEGFA-214ENST00000493786 TIAM2Q8IVF5 1701 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 GLTPD2A6NH11 291 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 ZBTB22O15209 634 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 ATP5JP18859 108 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 MCAMP43121 646 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 DACT2Q5SW24 774 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 DZIP1Q86YF9 867 aaKnown RBP9.25□□□□□ -0.93
VEGFA-214ENST00000493786 OGFOD1Q8N543 542 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 AGBL3Q8NEM8 1001 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 BOLA2Q9H3K6 86 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 KCNQ5Q9NR82 932 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 SNRKQ9NRH2 765 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 HMG20BQ9P0W2 317 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 ABCF2Q9UG63 623 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 HDAC9Q9UKV0 1011 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 GTF3C3Q9Y5Q9 886 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 SBF1O95248 1867 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 MAST3O60307 1309 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 AOX1Q06278 1338 aa9.25□□□□□ -0.93
VEGFA-214ENST00000493786 IQCA1LA6NCM1 817 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 DDNO94850 711 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-214ENST00000493786 LDHBP07195 334 aaKnown RBP9.24□□□□□ -0.93
VEGFA-214ENST00000493786 ZAP70P43403 619 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 GMPSP49915 693 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-214ENST00000493786 MMP14P50281 582 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 PDE1AP54750 535 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 TSHZ3Q63HK5 1081 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 PI16Q6UXB8 463 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 ERICH6Q7L0X2 663 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 SLF2Q8IX21 1173 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 OTUD7AQ8TE49 926 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-214ENST00000493786 HAUS7Q99871 368 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 RAI14Q9P0K7 980 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 LRP2BPQ9P2M1 347 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 STAP2Q9UGK3 403 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 SUGT1Q9Y2Z0 365 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 DICER1Q9UPY3 1922 aaKnown RBP9.24□□□□□ -0.93
VEGFA-214ENST00000493786 SALL1Q9NSC2 1324 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 UTRNP46939 3433 aa9.24□□□□□ -0.93
VEGFA-214ENST00000493786 F8W031 263 aaPredicted RBP9.23□□□□□ -0.93
VEGFA-214ENST00000493786 H7C1D1 291 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 GOLIM4O00461 696 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 USP17L8P0C7I0 530 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 YY1P25490 414 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 GSTO1P78417 241 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 MAP3K12Q12852 859 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 SCARF1Q14162 830 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 LRRFIP1Q32MZ4 808 aaKnown RBP9.23□□□□□ -0.93
VEGFA-214ENST00000493786 KIAA0825Q8IV33 1275 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 PIAS4Q8N2W9 510 aaPredicted RBP9.23□□□□□ -0.93
VEGFA-214ENST00000493786 ZNF526Q8TF50 670 aaPredicted RBP9.23□□□□□ -0.93
VEGFA-214ENST00000493786 DPF2Q92785 391 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.23□□□□□ -0.931e-63■□□□□ 9
VEGFA-214ENST00000493786 PAG1Q9NWQ8 432 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 ZBTB12Q9Y330 459 aaPredicted RBP9.23□□□□□ -0.93
VEGFA-214ENST00000493786 CCDC88AQ3V6T2 1871 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 CHD4Q14839 1912 aa9.23□□□□□ -0.93
VEGFA-214ENST00000493786 COL1A1P02452 1464 aaPredicted RBP9.22□□□□□ -0.93
VEGFA-214ENST00000493786 TRIM6-TRIM34B2RNG4 842 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 IGSF3O75054 1194 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 IDH1O75874 414 aaKnown RBP9.22□□□□□ -0.93
VEGFA-214ENST00000493786 RGS3P49796 1198 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 RBM5P52756 815 aaKnown RBP eCLIP9.22□□□□□ -0.93
VEGFA-214ENST00000493786 ZSCAN25Q6NSZ9 544 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 MICALL2Q8IY33 904 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 CNTROBQ8N137 903 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 CERS5Q8N5B7 392 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 PI4K2BQ8TCG2 481 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 L3MBTL3Q96JM7 780 aaPredicted RBP9.22□□□□□ -0.93
VEGFA-214ENST00000493786 NOL10Q9BSC4 688 aaKnown RBP9.22□□□□□ -0.93
VEGFA-214ENST00000493786 MXD3Q9BW11 206 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 OSBPL3Q9H4L5 887 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 GPRC5DQ9NZD1 345 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 CNOT7Q9UIV1 285 aaKnown RBP9.22□□□□□ -0.93
VEGFA-214ENST00000493786 HACL1Q9UJ83 578 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 TTF2Q9UNY4 1162 aaKnown RBP9.22□□□□□ -0.93
VEGFA-214ENST00000493786 NDUFB9Q9Y6M9 179 aa9.22□□□□□ -0.93
VEGFA-214ENST00000493786 SALL3Q9BXA9 1300 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms