RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 EPB41L2O43491 1005 aaKnown RBP15.32■□□□□ 0.04
VPS52-220ENST00000493674 HIBADHP31937 336 aaKnown RBP15.32■□□□□ 0.04
VPS52-220ENST00000493674 NMIQ13287 307 aaPredicted RBP15.32■□□□□ 0.04
VPS52-220ENST00000493674 TTF1Q15361 905 aaPredicted RBP15.32■□□□□ 0.04
VPS52-220ENST00000493674 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
VPS52-220ENST00000493674 OLFM4Q6UX06 510 aa15.32■□□□□ 0.04
VPS52-220ENST00000493674 NLGN2Q8NFZ4 835 aa15.32■□□□□ 0.04
VPS52-220ENST00000493674 PIH1D3Q9NQM4 214 aaKnown RBP15.32■□□□□ 0.04
VPS52-220ENST00000493674 DIAPH3Q9NSV4 1193 aa15.32■□□□□ 0.04
VPS52-220ENST00000493674 BAZ2AQ9UIF9 1905 aaKnown RBP15.32■□□□□ 0.04
VPS52-220ENST00000493674 ADAMTSL1Q8N6G6 1762 aa15.31■□□□□ 0.04
VPS52-220ENST00000493674 A0A0D9SFI3 127 aa15.31■□□□□ 0.04
VPS52-220ENST00000493674 MFAP1P55081 439 aaKnown RBP15.31■□□□□ 0.04
VPS52-220ENST00000493674 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
VPS52-220ENST00000493674 MPNDQ8N594 471 aa15.31■□□□□ 0.04
VPS52-220ENST00000493674 TTLL6Q8N841 843 aa15.31■□□□□ 0.04
VPS52-220ENST00000493674 TDRD7Q8NHU6 1098 aaKnown RBP15.31■□□□□ 0.04
VPS52-220ENST00000493674 DENND2AQ9ULE3 1009 aa15.31■□□□□ 0.04
VPS52-220ENST00000493674 REC8O95072 547 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 IL1R1P14778 569 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 RBM25P49756 843 aaKnown RBP15.3■□□□□ 0.04
VPS52-220ENST00000493674 GRIPAP1Q4V328 841 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 ZMYM1Q5SVZ6 1142 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 ZNF804AQ7Z570 1209 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 NAV1Q8NEY1 1877 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 RUFY2Q8WXA3 655 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 GPR101Q96P66 508 aaPredicted RBP15.3■□□□□ 0.04
VPS52-220ENST00000493674 USP26Q9BXU7 913 aa15.3■□□□□ 0.04
VPS52-220ENST00000493674 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
VPS52-220ENST00000493674 SALL1Q9NSC2 1324 aa15.29■□□□□ 0.04
VPS52-220ENST00000493674 A0A0G2JLW4 131 aa15.29■□□□□ 0.04
VPS52-220ENST00000493674 RNF113AO15541 343 aaKnown RBP15.29■□□□□ 0.04
VPS52-220ENST00000493674 CHGBP05060 677 aa15.29■□□□□ 0.04
VPS52-220ENST00000493674 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
VPS52-220ENST00000493674 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
VPS52-220ENST00000493674 DPP8Q6V1X1 898 aaPredicted RBP15.29■□□□□ 0.04
VPS52-220ENST00000493674 UPF2Q9HAU5 1272 aaKnown RBP15.29■□□□□ 0.04
VPS52-220ENST00000493674 COL4A5P29400 1685 aa15.28■□□□□ 0.04
VPS52-220ENST00000493674 TCRBV5S4A2TA0A5A2 114 aa15.28■□□□□ 0.04
VPS52-220ENST00000493674 IGSF3O75054 1194 aa15.28■□□□□ 0.04
VPS52-220ENST00000493674 ADD2P35612 726 aa15.28■□□□□ 0.04
VPS52-220ENST00000493674 LRRFIP1Q32MZ4 808 aaKnown RBP15.28■□□□□ 0.04
VPS52-220ENST00000493674 VPS37DQ86XT2 251 aa15.28■□□□□ 0.04
VPS52-220ENST00000493674 LSG1Q9H089 658 aaKnown RBP15.28■□□□□ 0.04
VPS52-220ENST00000493674 CD209Q9NNX6 404 aa15.28■□□□□ 0.04
VPS52-220ENST00000493674 HELLSQ9NRZ9 838 aa15.28■□□□□ 0.04
VPS52-220ENST00000493674 MYH1P12882 1939 aa15.27■□□□□ 0.04
VPS52-220ENST00000493674 C6orf229H3BNL8 230 aa15.27■□□□□ 0.04
VPS52-220ENST00000493674 UBE3CQ15386 1083 aa15.27■□□□□ 0.04
VPS52-220ENST00000493674 IL17RAQ96F46 866 aa15.27■□□□□ 0.04
VPS52-220ENST00000493674 C22orf23Q9BZE7 217 aa15.27■□□□□ 0.04
VPS52-220ENST00000493674 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.043e-7■■■■□ 22.2
VPS52-220ENST00000493674 IQSEC3Q9UPP2 1182 aaPredicted RBP15.27■□□□□ 0.04
VPS52-220ENST00000493674 TIAM2Q8IVF5 1701 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 MAST3O60307 1309 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 CCDC171Q6TFL3 1326 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 PDE6AP16499 860 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 CCDC93Q567U6 631 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 TMED8Q6PL24 325 aaPredicted RBP15.26■□□□□ 0.03
VPS52-220ENST00000493674 ZNF589Q86UQ0 364 aaPredicted RBP15.26■□□□□ 0.03
VPS52-220ENST00000493674 APPBP2Q92624 585 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 PSMD1Q99460 953 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 EYA3Q99504 573 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 COA1Q9GZY4 146 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 TMX4Q9H1E5 349 aaPredicted RBP15.26■□□□□ 0.03
VPS52-220ENST00000493674 PIM2Q9P1W9 311 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
VPS52-220ENST00000493674 GRIN3BO60391 1043 aa15.25■□□□□ 0.03
VPS52-220ENST00000493674 SLFNL1Q499Z3 407 aa15.25■□□□□ 0.03
VPS52-220ENST00000493674 MCMDC2Q4G0Z9 681 aa15.25■□□□□ 0.03
VPS52-220ENST00000493674 SOGA3Q5TF21 947 aa15.25■□□□□ 0.03
VPS52-220ENST00000493674 SEC62Q99442 399 aaKnown RBP15.25■□□□□ 0.03
VPS52-220ENST00000493674 MYH8P13535 1937 aa15.25■□□□□ 0.03
VPS52-220ENST00000493674 M0R2C6 588 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 C21orf2O43822 256 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 IDH1O75874 414 aaKnown RBP15.24■□□□□ 0.03
VPS52-220ENST00000493674 MAP3K12Q12852 859 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 GPR162Q16538 588 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 RTKN2Q8IZC4 609 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 SUPT20HQ8NEM7 779 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 ZNF384Q8TF68 577 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 OSBP2Q969R2 916 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 KIF2CQ99661 725 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 ANO2Q9NQ90 1003 aa15.24■□□□□ 0.03
VPS52-220ENST00000493674 ZNF532Q9HCE3 1301 aa15.23■□□□□ 0.03
VPS52-220ENST00000493674 PTH1RQ03431 593 aa15.23■□□□□ 0.03
VPS52-220ENST00000493674 KIAA2012Q0VF49 1180 aa15.23■□□□□ 0.03
VPS52-220ENST00000493674 DALRD3Q5D0E6 543 aaKnown RBP15.23■□□□□ 0.03
VPS52-220ENST00000493674 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
VPS52-220ENST00000493674 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
VPS52-220ENST00000493674 MAP4K1Q92918 833 aa15.23■□□□□ 0.03
VPS52-220ENST00000493674 KCNB2Q92953 911 aa15.23■□□□□ 0.03
VPS52-220ENST00000493674 ZC3H12CQ9C0D7 883 aaKnown RBP15.23■□□□□ 0.03
VPS52-220ENST00000493674 FOXP2O15409 715 aa15.22■□□□□ 0.03
VPS52-220ENST00000493674 HSPA4P34932 840 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms