RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 MAP3K11Q16584 847 aa27.39■■□□□ 1.98
PFDN4-205ENST00000493356 C15orf52Q6ZUT6 534 aaKnown RBP27.39■■□□□ 1.98
PFDN4-205ENST00000493356 PCDHAC2Q9Y5I4 1007 aa27.39■■□□□ 1.98
PFDN4-205ENST00000493356 IL16Q14005 1332 aa27.39■■□□□ 1.97
PFDN4-205ENST00000493356 MANSC4A6NHS7 340 aaPredicted RBP27.38■■□□□ 1.97
PFDN4-205ENST00000493356 CCDC184Q52MB2 194 aa27.38■■□□□ 1.97
PFDN4-205ENST00000493356 HELBQ8NG08 1087 aaPredicted RBP27.38■■□□□ 1.97
PFDN4-205ENST00000493356 SLC10A4Q96EP9 437 aa27.38■■□□□ 1.97
PFDN4-205ENST00000493356 PPP2R3BQ9Y5P8 575 aa27.38■■□□□ 1.97
PFDN4-205ENST00000493356 HTTP42858 3142 aa27.38■■□□□ 1.97
PFDN4-205ENST00000493356 INHBEP58166 350 aa27.37■■□□□ 1.97
PFDN4-205ENST00000493356 CLMNQ96JQ2 1002 aa27.37■■□□□ 1.97
PFDN4-205ENST00000493356 PPP1R12BO60237 982 aaPredicted RBP27.36■■□□□ 1.97
PFDN4-205ENST00000493356 ZBTB48P10074 688 aaPredicted RBP27.36■■□□□ 1.97
PFDN4-205ENST00000493356 IFNL1Q8IU54 200 aa27.36■■□□□ 1.97
PFDN4-205ENST00000493356 F8W031 263 aaPredicted RBP27.35■■□□□ 1.97
PFDN4-205ENST00000493356 IL1R1P14778 569 aa27.35■■□□□ 1.97
PFDN4-205ENST00000493356 FOXO4P98177 505 aa27.35■■□□□ 1.97
PFDN4-205ENST00000493356 IFIT5Q13325 482 aaKnown RBP27.35■■□□□ 1.97
PFDN4-205ENST00000493356 CFAP100Q494V2 611 aa27.35■■□□□ 1.97
PFDN4-205ENST00000493356 WNK4Q96J92 1243 aa27.35■■□□□ 1.97
PFDN4-205ENST00000493356 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.35■■□□□ 1.97
PFDN4-205ENST00000493356 CLRN2A0PK11 232 aa27.34■■□□□ 1.97
PFDN4-205ENST00000493356 SPDYE2BA6NHP3 402 aa27.34■■□□□ 1.97
PFDN4-205ENST00000493356 SPDYE6P0CI01 402 aa27.34■■□□□ 1.97
PFDN4-205ENST00000493356 ZNF804AQ7Z570 1209 aa27.34■■□□□ 1.97
PFDN4-205ENST00000493356 PRMT6Q96LA8 375 aaPredicted RBP27.34■■□□□ 1.97
PFDN4-205ENST00000493356 FANCIQ9NVI1 1328 aa27.34■■□□□ 1.97
PFDN4-205ENST00000493356 IGF2BP3O00425 579 aaKnown RBP eCLIP27.33■■□□□ 1.97
PFDN4-205ENST00000493356 MYO1BO43795 1136 aa27.33■■□□□ 1.97
PFDN4-205ENST00000493356 FKBP1AP62942 108 aaKnown RBP27.33■■□□□ 1.97
PFDN4-205ENST00000493356 AOX1Q06278 1338 aa27.33■■□□□ 1.97
PFDN4-205ENST00000493356 UNCXA6NJT0 531 aa27.32■■□□□ 1.96
PFDN4-205ENST00000493356 SUPT20HL1Q3ZLR7 823 aa27.32■■□□□ 1.96
PFDN4-205ENST00000493356 CHMP3Q9Y3E7 222 aa27.32■■□□□ 1.96
PFDN4-205ENST00000493356 TRIM17Q9Y577 477 aa27.32■■□□□ 1.96
PFDN4-205ENST00000493356 VAMP4O75379 141 aa27.31■■□□□ 1.96
PFDN4-205ENST00000493356 NBPF12Q5TAG4 269 aaPredicted RBP27.31■■□□□ 1.96
PFDN4-205ENST00000493356 VEZTQ9HBM0 779 aa27.31■■□□□ 1.96
PFDN4-205ENST00000493356 JAG2Q9Y219 1238 aa27.31■■□□□ 1.96
PFDN4-205ENST00000493356 NCBP3Q53F19 620 aaKnown RBP27.3■■□□□ 1.96
PFDN4-205ENST00000493356 OTOP1Q7RTM1 612 aa27.3■■□□□ 1.96
PFDN4-205ENST00000493356 F6X3S4 739 aa27.29■■□□□ 1.96
PFDN4-205ENST00000493356 BEND3Q5T5X7 828 aa27.29■■□□□ 1.96
PFDN4-205ENST00000493356 USP2O75604 605 aaPredicted RBP27.28■■□□□ 1.96
PFDN4-205ENST00000493356 GJA5P36382 358 aa27.28■■□□□ 1.96
PFDN4-205ENST00000493356 IREB2P48200 963 aaKnown RBP27.28■■□□□ 1.96
PFDN4-205ENST00000493356 EPHA10Q5JZY3 1008 aa27.28■■□□□ 1.96
PFDN4-205ENST00000493356 LMBR1LQ6UX01 489 aa27.28■■□□□ 1.96
PFDN4-205ENST00000493356 OTOFQ9HC10 1997 aa27.28■■□□□ 1.96
PFDN4-205ENST00000493356 CENPFP49454 3210 aa27.28■■□□□ 1.96
PFDN4-205ENST00000493356 RBM5P52756 815 aaKnown RBP eCLIP27.27■■□□□ 1.96
PFDN4-205ENST00000493356 RASA3Q14644 834 aa27.27■■□□□ 1.96
PFDN4-205ENST00000493356 ZNF594Q96JF6 807 aaPredicted RBP27.27■■□□□ 1.96
PFDN4-205ENST00000493356 PLIN1O60240 522 aa27.26■■□□□ 1.95
PFDN4-205ENST00000493356 CCDC57Q2TAC2 916 aa27.26■■□□□ 1.95
PFDN4-205ENST00000493356 LDHAL6AQ6ZMR3 332 aa27.26■■□□□ 1.95
PFDN4-205ENST00000493356 ANKRD13AQ8IZ07 590 aa27.26■■□□□ 1.95
PFDN4-205ENST00000493356 MKI67P46013 3256 aaKnown RBP27.26■■□□□ 1.95
PFDN4-205ENST00000493356 FAM205AQ6ZU69 1335 aa27.25■■□□□ 1.95
PFDN4-205ENST00000493356 EXOSC9Q06265 439 aaKnown RBP27.25■■□□□ 1.95
PFDN4-205ENST00000493356 CRHR2Q13324 411 aa27.25■■□□□ 1.95
PFDN4-205ENST00000493356 ERO1AQ96HE7 468 aa27.25■■□□□ 1.95
PFDN4-205ENST00000493356 TAF7LQ5H9L4 462 aa27.24■■□□□ 1.95
PFDN4-205ENST00000493356 INTS3Q68E01 1043 aaKnown RBP27.24■■□□□ 1.95
PFDN4-205ENST00000493356 OTUD7BQ6GQQ9 843 aa27.24■■□□□ 1.95
PFDN4-205ENST00000493356 CNNM1Q9NRU3 951 aa27.24■■□□□ 1.95
PFDN4-205ENST00000493356 RBBP6Q7Z6E9 1792 aaKnown RBP27.24■■□□□ 1.95
PFDN4-205ENST00000493356 KIAA0100Q14667 2235 aaKnown RBP27.24■■□□□ 1.95
PFDN4-205ENST00000493356 POTEFA5A3E0 1075 aa27.23■■□□□ 1.95
PFDN4-205ENST00000493356 GRM8O00222 908 aa27.23■■□□□ 1.95
PFDN4-205ENST00000493356 SPDYE2Q495Y8 402 aa27.23■■□□□ 1.95
PFDN4-205ENST00000493356 CD99L2Q8TCZ2 262 aa27.23■■□□□ 1.95
PFDN4-205ENST00000493356 PTPN18Q99952 460 aa27.23■■□□□ 1.95
PFDN4-205ENST00000493356 ARAP2Q8WZ64 1704 aa27.23■■□□□ 1.95
PFDN4-205ENST00000493356 TESPA1A2RU30 521 aaPredicted RBP27.22■■□□□ 1.95
PFDN4-205ENST00000493356 TNFAIP1Q13829 316 aa27.22■■□□□ 1.95
PFDN4-205ENST00000493356 MFSD14BQ5SR56 506 aa27.22■■□□□ 1.95
PFDN4-205ENST00000493356 WDR63Q8IWG1 891 aa27.22■■□□□ 1.95
PFDN4-205ENST00000493356 TDRD7Q8NHU6 1098 aaKnown RBP27.22■■□□□ 1.95
PFDN4-205ENST00000493356 ZNF70Q9UC06 446 aaPredicted RBP27.22■■□□□ 1.95
PFDN4-205ENST00000493356 PTPN22Q9Y2R2 807 aa27.22■■□□□ 1.95
PFDN4-205ENST00000493356 ELP3Q9H9T3 547 aa27.21■■□□□ 1.95
PFDN4-205ENST00000493356 SERPINA10Q9UK55 444 aa27.21■■□□□ 1.95
PFDN4-205ENST00000493356 TTF2Q9UNY4 1162 aaKnown RBP27.21■■□□□ 1.95
PFDN4-205ENST00000493356 UBE4AQ14139 1066 aa27.2■■□□□ 1.94
PFDN4-205ENST00000493356 OPTNQ96CV9 577 aa27.2■■□□□ 1.94
PFDN4-205ENST00000493356 TDRD3Q9H7E2 651 aaKnown RBP27.2■■□□□ 1.94
PFDN4-205ENST00000493356 SALL2Q9Y467 1007 aaPredicted RBP27.2■■□□□ 1.94
PFDN4-205ENST00000493356 GYG1P46976 350 aa27.19■■□□□ 1.94
PFDN4-205ENST00000493356 SP3Q02447 781 aa27.19■■□□□ 1.94
PFDN4-205ENST00000493356 CDAN1Q8IWY9 1227 aa27.19■■□□□ 1.94
PFDN4-205ENST00000493356 TEPSINQ96N21 525 aa27.19■■□□□ 1.94
PFDN4-205ENST00000493356 EFCC1Q9HA90 598 aa27.19■■□□□ 1.94
PFDN4-205ENST00000493356 HIBADHP31937 336 aaKnown RBP27.18■■□□□ 1.94
PFDN4-205ENST00000493356 CAP1Q01518 475 aa27.18■■□□□ 1.94
PFDN4-205ENST00000493356 ARMC5Q96C12 935 aa27.18■■□□□ 1.94
PFDN4-205ENST00000493356 GCC1Q96CN9 775 aa27.18■■□□□ 1.94
PFDN4-205ENST00000493356 MS4A4AQ96JQ5 239 aa27.18■■□□□ 1.94
PFDN4-205ENST00000493356 FAM84BQ96KN1 310 aaPredicted RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms