RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 F13BP05160 661 aa10.52□□□□□ -0.73
COL12A1-209ENST00000493109 CES1P23141 567 aa10.52□□□□□ -0.73
COL12A1-209ENST00000493109 MAP4P27816 1152 aaKnown RBP10.52□□□□□ -0.73
COL12A1-209ENST00000493109 FDX2Q6P4F2 183 aa10.52□□□□□ -0.73
COL12A1-209ENST00000493109 VN1R5Q7Z5H4 357 aa10.52□□□□□ -0.73
COL12A1-209ENST00000493109 SOX1O00570 391 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-209ENST00000493109 MSMPQ1L6U9 139 aa10.51□□□□□ -0.73
COL12A1-209ENST00000493109 ABI1Q8IZP0 508 aa10.51□□□□□ -0.73
COL12A1-209ENST00000493109 TMPRSS13Q9BYE2 586 aa10.51□□□□□ -0.73
COL12A1-209ENST00000493109 PIM2Q9P1W9 311 aa10.51□□□□□ -0.73
COL12A1-209ENST00000493109 TIAF1O95411 115 aa10.5□□□□□ -0.73
COL12A1-209ENST00000493109 PDGFAP04085 211 aa10.5□□□□□ -0.73
COL12A1-209ENST00000493109 C19orf57Q0VDD7 668 aa10.5□□□□□ -0.73
COL12A1-209ENST00000493109 TMEM102Q8N9M5 508 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-209ENST00000493109 FAM177BA6PVY3 158 aa10.49□□□□□ -0.73
COL12A1-209ENST00000493109 ATP2B4P23634 1241 aa10.49□□□□□ -0.73
COL12A1-209ENST00000493109 NXPE3Q969Y0 559 aa10.49□□□□□ -0.73
COL12A1-209ENST00000493109 LOC100289279A0A1B0GTE1 492 aa10.48□□□□□ -0.73
COL12A1-209ENST00000493109 DNM1Q05193 864 aaKnown RBP10.48□□□□□ -0.73
COL12A1-209ENST00000493109 ZKSCAN3Q9BRR0 538 aa10.48□□□□□ -0.73
COL12A1-209ENST00000493109 GAS2O43903 313 aaKnown RBP10.47□□□□□ -0.73
COL12A1-209ENST00000493109 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
COL12A1-209ENST00000493109 HELQQ8TDG4 1101 aa10.47□□□□□ -0.73
COL12A1-209ENST00000493109 EREGO14944 169 aa10.46□□□□□ -0.73
COL12A1-209ENST00000493109 SMG8Q8ND04 991 aaKnown RBP10.46□□□□□ -0.73
COL12A1-209ENST00000493109 OSMRQ99650 979 aa10.46□□□□□ -0.73
COL12A1-209ENST00000493109 SUGCTQ9HAC7 445 aa10.46□□□□□ -0.73
COL12A1-209ENST00000493109 COL19A1Q14993 1142 aa10.45□□□□□ -0.74
COL12A1-209ENST00000493109 CDPF1Q6NVV7 123 aa10.45□□□□□ -0.74
COL12A1-209ENST00000493109 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
COL12A1-209ENST00000493109 DRD2P14416 443 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 FOSL1P15407 271 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 MPSTP25325 297 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 EIF1AXP47813 144 aaKnown RBP10.44□□□□□ -0.74
COL12A1-209ENST00000493109 IKBKEQ14164 716 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 C8orf34Q49A92 452 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 LCE1DQ5T752 114 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 USP26Q9BXU7 913 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 CCDC39Q9UFE4 941 aa10.44□□□□□ -0.74
COL12A1-209ENST00000493109 RPLP1P05386 114 aaKnown RBP10.43□□□□□ -0.74
COL12A1-209ENST00000493109 MZF1P28698 734 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-209ENST00000493109 ADMP35318 185 aa10.43□□□□□ -0.74
COL12A1-209ENST00000493109 ARL4DP49703 201 aa10.43□□□□□ -0.74
COL12A1-209ENST00000493109 NUTM2GQ5VZR2 741 aa10.43□□□□□ -0.74
COL12A1-209ENST00000493109 CBLL1Q75N03 491 aa10.43□□□□□ -0.74
COL12A1-209ENST00000493109 C12orf50Q8NA57 414 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-209ENST00000493109 LEMD3Q9Y2U8 911 aa10.43□□□□□ -0.74
COL12A1-209ENST00000493109 PRNPP04156 253 aa10.42□□□□□ -0.74
COL12A1-209ENST00000493109 RXRBP28702 533 aa10.42□□□□□ -0.74
COL12A1-209ENST00000493109 NOM1Q5C9Z4 860 aaKnown RBP10.42□□□□□ -0.74
COL12A1-209ENST00000493109 C2CD4AQ8NCU7 369 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-209ENST00000493109 FBLIM1Q8WUP2 373 aa10.42□□□□□ -0.74
COL12A1-209ENST00000493109 NRSN2Q9GZP1 204 aa10.42□□□□□ -0.74
COL12A1-209ENST00000493109 LATS2Q9NRM7 1088 aa10.42□□□□□ -0.74
COL12A1-209ENST00000493109 ATG3Q9NT62 314 aa10.42□□□□□ -0.74
COL12A1-209ENST00000493109 ESRRAP11474 423 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-209ENST00000493109 PEAR1Q5VY43 1037 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-209ENST00000493109 GATA6Q92908 595 aa10.41□□□□□ -0.74
COL12A1-209ENST00000493109 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
COL12A1-209ENST00000493109 OSBPL1AQ9BXW6 950 aa10.41□□□□□ -0.74
COL12A1-209ENST00000493109 BHLHE41Q9C0J9 482 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-209ENST00000493109 SOX17Q9H6I2 414 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-209ENST00000493109 FOXD3Q9UJU5 478 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-209ENST00000493109 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
COL12A1-209ENST00000493109 ARID1BQ8NFD5 2236 aaPredicted RBP10.4□□□□□ -0.74
COL12A1-209ENST00000493109 FAM95CA0A1B0GW59 222 aa10.4□□□□□ -0.74
COL12A1-209ENST00000493109 TNFRSF21O75509 655 aa10.4□□□□□ -0.74
COL12A1-209ENST00000493109 MTMR3Q13615 1198 aa10.4□□□□□ -0.74
COL12A1-209ENST00000493109 KRTAP4-7Q9BYR0 210 aa10.4□□□□□ -0.74
COL12A1-209ENST00000493109 FZD5Q13467 585 aa10.39□□□□□ -0.75
COL12A1-209ENST00000493109 NFKBIBQ15653 356 aa10.39□□□□□ -0.75
COL12A1-209ENST00000493109 PMEPA1Q969W9 287 aa10.39□□□□□ -0.75
COL12A1-209ENST00000493109 CYP4F12Q9HCS2 524 aa10.39□□□□□ -0.75
COL12A1-209ENST00000493109 METTL12A8MUP2 240 aa10.38□□□□□ -0.75
COL12A1-209ENST00000493109 CPSF6Q16630 551 aaKnown RBP eCLIP10.38□□□□□ -0.75
COL12A1-209ENST00000493109 EZH1Q92800 747 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-209ENST00000493109 PRKAG2Q9UGJ0 569 aa10.38□□□□□ -0.75
COL12A1-209ENST00000493109 ANGEL1Q9UNK9 670 aaKnown RBP10.38□□□□□ -0.75
COL12A1-209ENST00000493109 CTSBP07858 339 aa10.37□□□□□ -0.75
COL12A1-209ENST00000493109 PCSK2P16519 638 aa10.37□□□□□ -0.75
COL12A1-209ENST00000493109 OGFOD2Q6N063 350 aa10.37□□□□□ -0.75
COL12A1-209ENST00000493109 ASAP3Q8TDY4 903 aa10.37□□□□□ -0.75
COL12A1-209ENST00000493109 GTF3C2Q8WUA4 911 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-209ENST00000493109 FAM170BA6NMN3 283 aa10.36□□□□□ -0.75
COL12A1-209ENST00000493109 PHACTR2O75167 634 aa10.36□□□□□ -0.75
COL12A1-209ENST00000493109 EXOSC6Q5RKV6 272 aaKnown RBP10.36□□□□□ -0.75
COL12A1-209ENST00000493109 ZAR1Q86SH2 424 aa10.36□□□□□ -0.75
COL12A1-209ENST00000493109 VSIG10LQ86VR7 867 aa10.36□□□□□ -0.75
COL12A1-209ENST00000493109 GIMAP7Q8NHV1 300 aa10.36□□□□□ -0.75
COL12A1-209ENST00000493109 SOX4Q06945 474 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-209ENST00000493109 PAOXQ6QHF9 649 aa10.35□□□□□ -0.75
COL12A1-209ENST00000493109 SNX29Q8TEQ0 813 aa10.35□□□□□ -0.75
COL12A1-209ENST00000493109 EDN3P14138 238 aa10.34□□□□□ -0.75
COL12A1-209ENST00000493109 ITGB5P18084 799 aa10.34□□□□□ -0.75
COL12A1-209ENST00000493109 JAG1P78504 1218 aa10.34□□□□□ -0.75
COL12A1-209ENST00000493109 GSTM4Q03013 218 aa10.34□□□□□ -0.75
COL12A1-209ENST00000493109 TBC1D32Q96NH3 1257 aa10.34□□□□□ -0.75
COL12A1-209ENST00000493109 ADH5P11766 374 aa10.33□□□□□ -0.76
COL12A1-209ENST00000493109 NPR3P17342 541 aa10.33□□□□□ -0.76
COL12A1-209ENST00000493109 USP11P51784 963 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms