RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TNNI3KQ59H18 835 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 LDHDQ86WU2 507 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 KIAA0825Q8IV33 1275 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 SMC1BQ8NDV3 1235 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 GMLQ99445 158 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 HDAC9Q9UKV0 1011 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 PCDHB15Q9Y5E8 787 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.35
CCM2-217ENST00000492883 FAM205AQ6ZU69 1335 aa17.21■□□□□ 0.34
CCM2-217ENST00000492883 RAB11FIP3O75154 756 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 PHKA1P46020 1223 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 C1QTNF8P60827 252 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 FKBP1AP62942 108 aaKnown RBP17.2■□□□□ 0.34
CCM2-217ENST00000492883 AAMPQ13685 434 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
CCM2-217ENST00000492883 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 EXOC6Q8TAG9 804 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 KIF1BPQ96EK5 621 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
CCM2-217ENST00000492883 F8W031 263 aaPredicted RBP17.19■□□□□ 0.34
CCM2-217ENST00000492883 ZNF280AP59817 542 aaPredicted RBP17.19■□□□□ 0.34
CCM2-217ENST00000492883 FSTL1Q12841 308 aa17.19■□□□□ 0.34
CCM2-217ENST00000492883 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
CCM2-217ENST00000492883 CERS5Q8N5B7 392 aa17.19■□□□□ 0.34
CCM2-217ENST00000492883 TRPM4Q8TD43 1214 aa17.19■□□□□ 0.34
CCM2-217ENST00000492883 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
CCM2-217ENST00000492883 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
CCM2-217ENST00000492883 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
CCM2-217ENST00000492883 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
CCM2-217ENST00000492883 CCDC8Q9H0W5 538 aaPredicted RBP17.18■□□□□ 0.34
CCM2-217ENST00000492883 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
CCM2-217ENST00000492883 MYOZ2Q9NPC6 264 aa17.18■□□□□ 0.34
CCM2-217ENST00000492883 DENND2AQ9ULE3 1009 aa17.18■□□□□ 0.34
CCM2-217ENST00000492883 SEMA3EO15041 775 aa17.17■□□□□ 0.34
CCM2-217ENST00000492883 MMP14P50281 582 aa17.17■□□□□ 0.34
CCM2-217ENST00000492883 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
CCM2-217ENST00000492883 AACSQ86V21 672 aa17.17■□□□□ 0.34
CCM2-217ENST00000492883 CLASRPQ8N2M8 674 aaKnown RBP17.17■□□□□ 0.34
CCM2-217ENST00000492883 WDR66Q8TBY9 1149 aa17.17■□□□□ 0.34
CCM2-217ENST00000492883 EAF2Q96CJ1 260 aaPredicted RBP17.17■□□□□ 0.34
CCM2-217ENST00000492883 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
CCM2-217ENST00000492883 ZNF609O15014 1411 aa17.16■□□□□ 0.34
CCM2-217ENST00000492883 EGFRP00533 1210 aa17.16■□□□□ 0.34
CCM2-217ENST00000492883 TTC39AQ5SRH9 613 aa17.16■□□□□ 0.34
CCM2-217ENST00000492883 MAP1SQ66K74 1059 aaPredicted RBP17.16■□□□□ 0.34
CCM2-217ENST00000492883 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
CCM2-217ENST00000492883 IFIT2P09913 472 aaKnown RBP17.15■□□□□ 0.34
CCM2-217ENST00000492883 UQCRFS1P1P0C7P4 283 aa17.15■□□□□ 0.34
CCM2-217ENST00000492883 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
CCM2-217ENST00000492883 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
CCM2-217ENST00000492883 LRRCC1Q9C099 1032 aa17.15■□□□□ 0.34
CCM2-217ENST00000492883 TTF2Q9UNY4 1162 aaKnown RBP17.15■□□□□ 0.34
CCM2-217ENST00000492883 RBM5P52756 815 aaKnown RBP eCLIP17.14■□□□□ 0.33
CCM2-217ENST00000492883 RASGRF1Q13972 1273 aa17.14■□□□□ 0.33
CCM2-217ENST00000492883 SCARF1Q14162 830 aa17.14■□□□□ 0.33
CCM2-217ENST00000492883 DBNLQ9UJU6 430 aaKnown RBP17.14■□□□□ 0.33
CCM2-217ENST00000492883 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
CCM2-217ENST00000492883 GRIK5Q16478 980 aa17.13■□□□□ 0.33
CCM2-217ENST00000492883 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
CCM2-217ENST00000492883 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
CCM2-217ENST00000492883 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
CCM2-217ENST00000492883 TLR7Q9NYK1 1049 aaKnown RBP17.13■□□□□ 0.33
CCM2-217ENST00000492883 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
CCM2-217ENST00000492883 SUGT1Q9Y2Z0 365 aa17.13■□□□□ 0.33
CCM2-217ENST00000492883 A0A1B0GUL6 1792 aa17.12■□□□□ 0.33
CCM2-217ENST00000492883 SCN4AP35499 1836 aa17.12■□□□□ 0.33
CCM2-217ENST00000492883 SCN9AQ15858 1988 aa17.12■□□□□ 0.33
CCM2-217ENST00000492883 ZBTB22O15209 634 aa17.12■□□□□ 0.33
CCM2-217ENST00000492883 ARID4AP29374 1257 aaPredicted RBP17.12■□□□□ 0.33
CCM2-217ENST00000492883 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
CCM2-217ENST00000492883 HMG20BQ9P0W2 317 aa17.12■□□□□ 0.33
CCM2-217ENST00000492883 WNT10BO00744 389 aa17.11■□□□□ 0.33
CCM2-217ENST00000492883 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
CCM2-217ENST00000492883 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
CCM2-217ENST00000492883 HDAC1Q13547 482 aaPredicted RBP17.11■□□□□ 0.33
CCM2-217ENST00000492883 NBPF9Q3BBW0 867 aa17.11■□□□□ 0.33
CCM2-217ENST00000492883 ANGEL2Q5VTE6 544 aaKnown RBP17.11■□□□□ 0.33
CCM2-217ENST00000492883 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
CCM2-217ENST00000492883 RWDD1Q9H446 243 aaPredicted RBP17.11■□□□□ 0.33
CCM2-217ENST00000492883 ABCF2Q9UG63 623 aa17.11■□□□□ 0.33
CCM2-217ENST00000492883 ITGBL1O95965 494 aaPredicted RBP17.1■□□□□ 0.33
CCM2-217ENST00000492883 MCAMP43121 646 aa17.1■□□□□ 0.33
CCM2-217ENST00000492883 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
CCM2-217ENST00000492883 USP48Q86UV5 1035 aa17.1■□□□□ 0.33
CCM2-217ENST00000492883 ZNF512BQ96KM6 892 aaPredicted RBP17.1■□□□□ 0.33
CCM2-217ENST00000492883 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
CCM2-217ENST00000492883 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
CCM2-217ENST00000492883 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
CCM2-217ENST00000492883 SERPINA10Q9UK55 444 aa17.1■□□□□ 0.33
CCM2-217ENST00000492883 MAST3O60307 1309 aa17.1■□□□□ 0.33
CCM2-217ENST00000492883 ASTN2O75129 1339 aaPredicted RBP17.1■□□□□ 0.33
CCM2-217ENST00000492883 PDS5AQ29RF7 1337 aaKnown RBP17.1■□□□□ 0.33
CCM2-217ENST00000492883 SALL1Q9NSC2 1324 aa17.1■□□□□ 0.33
CCM2-217ENST00000492883 MYO1BO43795 1136 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 CENPBP07199 599 aaPredicted RBP17.09■□□□□ 0.33
CCM2-217ENST00000492883 PRDX5P30044 214 aa17.09■□□□□ 0.33
CCM2-217ENST00000492883 CRKP46108 304 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms