RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 PSME4Q14997 1843 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 FAM205AQ6ZU69 1335 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 SGSM2O43147 1006 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 FKBP4Q02790 459 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTPRE-210ENST00000492479 DALRD3Q5D0E6 543 aaKnown RBP16.56■□□□□ 0.24
PTPRE-210ENST00000492479 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 PI16Q6UXB8 463 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 RUFY2Q8WXA3 655 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 ANTXR1Q9H6X2 564 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 CD209Q9NNX6 404 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
PTPRE-210ENST00000492479 SEC24BO95487 1268 aa16.55■□□□□ 0.24
PTPRE-210ENST00000492479 ZSCAN25Q6NSZ9 544 aa16.55■□□□□ 0.24
PTPRE-210ENST00000492479 TSHZ2Q9NRE2 1034 aa16.55■□□□□ 0.24
PTPRE-210ENST00000492479 DIAPH3Q9NSV4 1193 aa16.55■□□□□ 0.24
PTPRE-210ENST00000492479 CCDC88AQ3V6T2 1871 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 C6orf229H3BNL8 230 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 RNF113AO15541 343 aaKnown RBP16.54■□□□□ 0.24
PTPRE-210ENST00000492479 REC8O95072 547 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 KIAA2012Q0VF49 1180 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPRE-210ENST00000492479 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
PTPRE-210ENST00000492479 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
PTPRE-210ENST00000492479 C21orf2O43822 256 aa16.53■□□□□ 0.24
PTPRE-210ENST00000492479 ADD2P35612 726 aa16.53■□□□□ 0.24
PTPRE-210ENST00000492479 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
PTPRE-210ENST00000492479 ZGPATQ8N5A5 531 aaKnown RBP16.53■□□□□ 0.24
PTPRE-210ENST00000492479 WDR66Q8TBY9 1149 aa16.53■□□□□ 0.24
PTPRE-210ENST00000492479 ZC3H12CQ9C0D7 883 aaKnown RBP16.53■□□□□ 0.24
PTPRE-210ENST00000492479 TCRBV5S4A2TA0A5A2 114 aa16.52■□□□□ 0.24
PTPRE-210ENST00000492479 SOCS7O14512 581 aa16.52■□□□□ 0.24
PTPRE-210ENST00000492479 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
PTPRE-210ENST00000492479 NMIQ13287 307 aaPredicted RBP16.52■□□□□ 0.24
PTPRE-210ENST00000492479 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
PTPRE-210ENST00000492479 IL25Q9H293 177 aa16.52■□□□□ 0.24
PTPRE-210ENST00000492479 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 A0A0D9SFI3 127 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 RBM25P49756 843 aaKnown RBP16.51■□□□□ 0.23
PTPRE-210ENST00000492479 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
PTPRE-210ENST00000492479 TBC1D22AQ8WUA7 517 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 APPBP2Q92624 585 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 FAM227BQ96M60 508 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 TBC1D32Q96NH3 1257 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 GPR101Q96P66 508 aaPredicted RBP16.51■□□□□ 0.23
PTPRE-210ENST00000492479 UPF2Q9HAU5 1272 aaKnown RBP16.51■□□□□ 0.23
PTPRE-210ENST00000492479 SUGT1Q9Y2Z0 365 aa16.51■□□□□ 0.23
PTPRE-210ENST00000492479 PDE6AP16499 860 aa16.5■□□□□ 0.23
PTPRE-210ENST00000492479 MCMDC2Q4G0Z9 681 aa16.5■□□□□ 0.23
PTPRE-210ENST00000492479 CWC27Q6UX04 472 aaKnown RBP16.5■□□□□ 0.23
PTPRE-210ENST00000492479 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
PTPRE-210ENST00000492479 USP26Q9BXU7 913 aa16.5■□□□□ 0.23
PTPRE-210ENST00000492479 SPTY2D1Q68D10 685 aaPredicted RBP16.49■□□□□ 0.23
PTPRE-210ENST00000492479 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
PTPRE-210ENST00000492479 LSG1Q9H089 658 aaKnown RBP16.49■□□□□ 0.23
PTPRE-210ENST00000492479 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
PTPRE-210ENST00000492479 MAST3O60307 1309 aa16.48■□□□□ 0.23
PTPRE-210ENST00000492479 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
PTPRE-210ENST00000492479 IDH1O75874 414 aaKnown RBP16.48■□□□□ 0.23
PTPRE-210ENST00000492479 MFAP1P55081 439 aaKnown RBP16.48■□□□□ 0.23
PTPRE-210ENST00000492479 SLC9C2Q5TAH2 1124 aa16.48■□□□□ 0.23
PTPRE-210ENST00000492479 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
PTPRE-210ENST00000492479 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
PTPRE-210ENST00000492479 COL4A5P29400 1685 aa16.47■□□□□ 0.23
PTPRE-210ENST00000492479 ZNF384Q8TF68 577 aa16.47■□□□□ 0.23
PTPRE-210ENST00000492479 OSBP2Q969R2 916 aa16.47■□□□□ 0.23
PTPRE-210ENST00000492479 NSUN4Q96CB9 384 aaKnown RBP16.47■□□□□ 0.23
PTPRE-210ENST00000492479 LRP2BPQ9P2M1 347 aa16.47■□□□□ 0.23
PTPRE-210ENST00000492479 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
PTPRE-210ENST00000492479 ZNF532Q9HCE3 1301 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 NFKBIEO00221 500 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 STRIP1Q5VSL9 837 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 ERICH6Q7L0X2 663 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 ZNF589Q86UQ0 364 aaPredicted RBP16.46■□□□□ 0.23
PTPRE-210ENST00000492479 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 KCNB2Q92953 911 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 SYT17Q9BSW7 474 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 C22orf23Q9BZE7 217 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
PTPRE-210ENST00000492479 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
PTPRE-210ENST00000492479 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.23
PTPRE-210ENST00000492479 PPIP5K2O43314 1243 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 ECE2O60344 883 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 CHGBP05060 677 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 AOC3Q16853 763 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 MAGEB6Q8N7X4 407 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 FAM163AQ96GL9 167 aaPredicted RBP16.45■□□□□ 0.22
PTPRE-210ENST00000492479 DSCC1Q9BVC3 393 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 ABCF2Q9UG63 623 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 RPAP1Q9BWH6 1393 aaPredicted RBP16.45■□□□□ 0.22
PTPRE-210ENST00000492479 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
PTPRE-210ENST00000492479 M0R2C6 588 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 LDHBP07195 334 aaKnown RBP16.44■□□□□ 0.22
PTPRE-210ENST00000492479 PRDX5P30044 214 aa16.44■□□□□ 0.22
PTPRE-210ENST00000492479 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
PTPRE-210ENST00000492479 ANAPC15P60006 121 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms