RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ONECUT3O60422 494 aaPredicted RBP5.31□□□□□ -1.56
TRA2B-215ENST00000492417 GPSM2P81274 684 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 NMIQ13287 307 aaPredicted RBP5.31□□□□□ -1.56
TRA2B-215ENST00000492417 C3orf67Q6ZVT6 689 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 MAPKAPK5Q8IW41 473 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 SMC5Q8IY18 1101 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 GBP4Q96PP9 640 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 LRRC2Q9BYS8 371 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 ATRNO75882 1429 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 PNPLA7Q6ZV29 1317 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 GOLGA6L4A6NEF3 574 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 H3BQV1 296 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 SETD1AO15047 1707 aaKnown RBP5.31□□□□□ -1.56
TRA2B-215ENST00000492417 PRDM1O75626 825 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 HLA-DOAP06340 250 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 GSTO1P78417 241 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 IFFO2Q5TF58 517 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 AMIGO3Q86WK7 504 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 SIRT2Q8IXJ6 389 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 WDR66Q8TBY9 1149 aa5.31□□□□□ -1.56
TRA2B-215ENST00000492417 BSDC1Q9NW68 430 aaPredicted RBP5.31□□□□□ -1.56
TRA2B-215ENST00000492417 DBNLQ9UJU6 430 aaKnown RBP5.31□□□□□ -1.56
TRA2B-215ENST00000492417 TSPY2A6NKD2 308 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 SASH1O94885 1247 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 UBE4AQ14139 1066 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 DIXDC1Q155Q3 683 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 ANTXR1Q9H6X2 564 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 CTNNA3Q9UI47 895 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 ZBTB12Q9Y330 459 aaPredicted RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 RGS12O14924 1447 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 CACNB3P54284 484 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 FOXO4P98177 505 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 TRIM28Q13263 835 aaKnown RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 TBC1D10BQ4KMP7 808 aaPredicted RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 BLOC1S2Q6QNY1 142 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 CHST3Q7LGC8 479 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 CCDC144CPQ8IYA2 1237 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 RTKN2Q8IZC4 609 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 IL27Q8NEV9 243 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 TGFBRAP1Q8WUH2 860 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 FAM227BQ96M60 508 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 SEC62Q99442 399 aaKnown RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 VAT1LQ9HCJ6 419 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 LEMD3Q9Y2U8 911 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 MON2Q7Z3U7 1717 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 POLRMTO00411 1230 aaKnown RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 CASTP20810 708 aaKnown RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 PSMA5P28066 241 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 NF2P35240 595 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 ZYXQ15942 572 aaKnown RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 SOGA3Q5TF21 947 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 CIAPIN1Q6FI81 312 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 USP40Q9NVE5 1235 aa5.3□□□□□ -1.56
TRA2B-215ENST00000492417 AHDC1Q5TGY3 1603 aaPredicted RBP5.3□□□□□ -1.56
TRA2B-215ENST00000492417 VPS37CA5D8V6 355 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 CCDC69A6NI79 296 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 RNF113AO15541 343 aaKnown RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 PDE4CQ08493 712 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 CCDC96Q2M329 555 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 SLFNL1Q499Z3 407 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 RASSF8Q8NHQ8 419 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 MXD3Q9BW11 206 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 CABP5Q9NP86 173 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 U3KPZ7 1027 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 ZNF532Q9HCE3 1301 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 LTN1O94822 1766 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 MYCNP04198 464 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 PDIA4P13667 645 aaKnown RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 BRPF1P55201 1214 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 RASSF7Q02833 373 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 MCMDC2Q4G0Z9 681 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 SDR42E1Q8WUS8 393 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 BCL2L12Q9HB09 334 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 CYP46A1Q9Y6A2 500 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 GOLGA6L6A8MZA4 724 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 IFIT3O14879 490 aaKnown RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 ECE2O60344 883 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 RAB3GAP1Q15042 981 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 TEKT1Q969V4 418 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 ZKSCAN3Q9BRR0 538 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 COL14A1Q05707 1796 aaKnown RBP5.29□□□□□ -1.56
TRA2B-215ENST00000492417 PTMSP20962 102 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 MFSD6Q6ZSS7 791 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 CD209Q9NNX6 404 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 RNF123Q5XPI4 1314 aa5.29□□□□□ -1.56
TRA2B-215ENST00000492417 PEAK1Q9H792 1746 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 WTIPA6NIX2 430 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 DTNBO60941 627 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 ZFYP08048 801 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 PRDX5P30044 214 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 MKRN3Q13064 507 aaKnown RBP5.28□□□□□ -1.56
TRA2B-215ENST00000492417 RASGRF1Q13972 1273 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TRIM29Q14134 588 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 TNIP1Q15025 636 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 CC2D2BQ6DHV5 1058 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 IQCA1Q86XH1 822 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 SULF1Q8IWU6 871 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
TRA2B-215ENST00000492417 DDX11Q96FC9 970 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms