RNA–Protein interactions for RNA: ENST00000491998.5

DFFB-211, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,152 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-211ENST00000491998 USP54Q70EL1 1684 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 H3BQV1 296 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 CHGBP05060 677 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 SCP2P22307 547 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 IFFO2Q5TF58 517 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 SUGP1Q8IWZ8 645 aaKnown RBP13.4□□□□□ -0.26
DFFB-211ENST00000491998 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.26
DFFB-211ENST00000491998 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 PAX7P23759 505 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 ZSCAN26Q16670 478 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 TSHZ1Q6ZSZ6 1077 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 MAP4K1Q92918 833 aa13.4□□□□□ -0.26
DFFB-211ENST00000491998 SLU7O95391 586 aaKnown RBP13.39□□□□□ -0.27
DFFB-211ENST00000491998 TLR7Q9NYK1 1049 aaKnown RBP13.39□□□□□ -0.27
DFFB-211ENST00000491998 NAIF1Q69YI7 327 aaPredicted RBP13.39□□□□□ -0.27
DFFB-211ENST00000491998 BRINP3Q76B58 766 aa13.39□□□□□ -0.27
DFFB-211ENST00000491998 ZNF589Q86UQ0 364 aaPredicted RBP13.39□□□□□ -0.27
DFFB-211ENST00000491998 ERO1AQ96HE7 468 aa13.39□□□□□ -0.27
DFFB-211ENST00000491998 SIL1Q9H173 461 aa13.39□□□□□ -0.27
DFFB-211ENST00000491998 GOLPH3LQ9H4A5 285 aa13.39□□□□□ -0.27
DFFB-211ENST00000491998 NDUFB9Q9Y6M9 179 aa13.39□□□□□ -0.27
DFFB-211ENST00000491998 DCCP43146 1447 aa13.39□□□□□ -0.27
DFFB-211ENST00000491998 CCAR1Q8IX12 1150 aaKnown RBP13.38□□□□□ -0.27
DFFB-211ENST00000491998 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 KDRP35968 1356 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 PSMA5P28066 241 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 BEND3Q5T5X7 828 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 ARHGEF25Q86VW2 580 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 ANKRD24Q8TF21 1146 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 TTC41PQ6P2S7 1318 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 GUCY1B3Q02153 619 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 KCNB2Q92953 911 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 EVI5LQ96CN4 794 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
DFFB-211ENST00000491998 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
DFFB-211ENST00000491998 POLR3GO15318 223 aaPredicted RBP13.37□□□□□ -0.27
DFFB-211ENST00000491998 MAGEA9P43362 315 aa13.37□□□□□ -0.27
DFFB-211ENST00000491998 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
DFFB-211ENST00000491998 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
DFFB-211ENST00000491998 RESTQ13127 1097 aa13.37□□□□□ -0.27
DFFB-211ENST00000491998 KLHDC4Q8TBB5 520 aa13.37□□□□□ -0.27
DFFB-211ENST00000491998 MRFAP1L1Q96HT8 127 aa13.37□□□□□ -0.27
DFFB-211ENST00000491998 C9orf78Q9NZ63 289 aaPredicted RBP13.37□□□□□ -0.27
DFFB-211ENST00000491998 KIF1AQ12756 1690 aa13.37□□□□□ -0.27
DFFB-211ENST00000491998 CWF19L2Q2TBE0 894 aaKnown RBP13.36□□□□□ -0.27
DFFB-211ENST00000491998 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
DFFB-211ENST00000491998 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 MED1Q15648 1581 aaPredicted RBP13.36□□□□□ -0.27
DFFB-211ENST00000491998 ADCY9O60503 1353 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 CDC25BP30305 580 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 CLCN6P51797 869 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 SNW1Q13573 536 aaKnown RBP13.36□□□□□ -0.27
DFFB-211ENST00000491998 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 ANKRD33BA6NCL7 494 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 STX1AQ16623 288 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 E4F1Q66K89 784 aaPredicted RBP13.36□□□□□ -0.27
DFFB-211ENST00000491998 EPC1Q9H2F5 836 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 KDM4CQ9H3R0 1056 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 SLAIN2Q9P270 581 aa13.36□□□□□ -0.27
DFFB-211ENST00000491998 SF3A1Q15459 793 aaKnown RBP13.35□□□□□ -0.27
DFFB-211ENST00000491998 PTPN21Q16825 1174 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 SLC24A3Q9HC58 644 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 ALS2Q96Q42 1657 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 JAKMIP3Q5VZ66 844 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 SARM1Q6SZW1 724 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 CCDC129Q6ZRS4 1044 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 SEC62Q99442 399 aaKnown RBP13.35□□□□□ -0.27
DFFB-211ENST00000491998 FHOD1Q9Y613 1164 aa13.35□□□□□ -0.27
DFFB-211ENST00000491998 BIN1O00499 593 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 SMC2O95347 1197 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 ZNF530Q6P9A1 599 aaPredicted RBP13.34□□□□□ -0.27
DFFB-211ENST00000491998 Q6ZUG5 572 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 SLIT3O75094 1523 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 RNF20Q5VTR2 975 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 TMC6Q7Z403 805 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 USP28Q96RU2 1077 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
DFFB-211ENST00000491998 NLRP2Q9NX02 1062 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 PXDNQ92626 1479 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 NEMFO60524 1076 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 NEBLO76041 1014 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 SASH1O94885 1247 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 SEC31AO94979 1220 aaKnown RBP13.34□□□□□ -0.27
DFFB-211ENST00000491998 ME1P48163 572 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 MMS22LQ6ZRQ5 1243 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 HOMER1Q86YM7 354 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 PPP1R13BQ96KQ4 1090 aa13.34□□□□□ -0.27
DFFB-211ENST00000491998 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms