RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 MON2Q7Z3U7 1717 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 RGPD1P0DJD0 1748 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 A0A1W2PQ27 194 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 A0A1W2PQ64 194 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 A0A1W2PQD8 194 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 ME1P48163 572 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 CHMP4BP1P59074 171 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 TUBB2AQ13885 445 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 KRT32Q14532 448 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 NCAPHQ15003 741 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 CNNM3Q8NE01 707 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 FBXW7Q969H0 707 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 WDR24Q96S15 920 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 TACO1Q9BSH4 297 aaKnown RBP7.42□□□□□ -1.22
CCDC6-202ENST00000491922 TUBB2BQ9BVA1 445 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 L1RE1Q9UN81 338 aa7.42□□□□□ -1.22
CCDC6-202ENST00000491922 PRR29P0C7W0 189 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 TOP1P11387 765 aaKnown RBP7.41□□□□□ -1.22
CCDC6-202ENST00000491922 NME9Q86XW9 330 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 VSTM4Q8IW00 320 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 FAM177A1Q8N128 213 aaPredicted RBP7.41□□□□□ -1.22
CCDC6-202ENST00000491922 MICALL1Q8N3F8 863 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 SMARCC2Q8TAQ2 1214 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 DHX58Q96C10 678 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 USP28Q96RU2 1077 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 ANKZF1Q9H8Y5 726 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 UBASH3AP57075 661 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 RRS1Q15050 365 aaKnown RBP7.41□□□□□ -1.22
CCDC6-202ENST00000491922 ADALQ6DHV7 355 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 TMEM139Q8IV31 216 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 CLASRPQ8N2M8 674 aaKnown RBP7.41□□□□□ -1.22
CCDC6-202ENST00000491922 ERCC4Q92889 916 aaPredicted RBP7.41□□□□□ -1.22
CCDC6-202ENST00000491922 TCEANC2Q96MN5 208 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 SUFUQ9UMX1 484 aa7.41□□□□□ -1.22
CCDC6-202ENST00000491922 JCADQ9P266 1359 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 STX10O60499 249 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 CUTAO60888 179 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 ERLIN2O94905 339 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 SERPINC1P01008 464 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 TRDNQ13061 729 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 NMIQ13287 307 aaPredicted RBP7.4□□□□□ -1.22
CCDC6-202ENST00000491922 EIF4A2Q14240 407 aaKnown RBP7.4□□□□□ -1.22
CCDC6-202ENST00000491922 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 CEP120Q8N960 986 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 CCDC12Q8WUD4 166 aaPredicted RBP7.4□□□□□ -1.22
CCDC6-202ENST00000491922 CCDC102AQ96A19 550 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 BAG1Q99933 345 aaPredicted RBP7.4□□□□□ -1.22
CCDC6-202ENST00000491922 BICC1Q9H694 974 aaKnown RBP7.4□□□□□ -1.22
CCDC6-202ENST00000491922 MIS18AQ9NYP9 233 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 MYO5BQ9ULV0 1848 aa7.4□□□□□ -1.22
CCDC6-202ENST00000491922 C3P01024 1663 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 N4BP1O75113 896 aaKnown RBP7.4□□□□□ -1.23
CCDC6-202ENST00000491922 SLC3A2P08195 630 aaKnown RBP7.4□□□□□ -1.23
CCDC6-202ENST00000491922 LMOD1P29536 600 aaPredicted RBP7.4□□□□□ -1.23
CCDC6-202ENST00000491922 SATB1Q01826 763 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 OS9Q13438 667 aaPredicted RBP7.4□□□□□ -1.23
CCDC6-202ENST00000491922 CASP8Q14790 479 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 CTCFLQ8NI51 663 aaPredicted RBP7.4□□□□□ -1.23
CCDC6-202ENST00000491922 AFAP1L1Q8TED9 768 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 FMNL2Q96PY5 1086 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 CARD10Q9BWT7 1032 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 FAM204AQ9H8W3 233 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 LRRC37A3O60309 1634 aa7.4□□□□□ -1.23
CCDC6-202ENST00000491922 AKAP12Q02952 1782 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 NUTM2FA1L443 756 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 MNAT1P51948 309 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 CFAP100Q494V2 611 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 NUTM2GQ5VZR2 741 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 FTOQ9C0B1 505 aaKnown RBP eCLIP7.39□□□□□ -1.23
CCDC6-202ENST00000491922 VIPAS39Q9H9C1 493 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 RTEL1Q9NZ71 1219 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 CDC23Q9UJX2 597 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 PCDHA7Q9UN72 937 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 MED23Q9ULK4 1368 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 ALKQ9UM73 1620 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 CEP170BQ9Y4F5 1589 aaPredicted RBP7.39□□□□□ -1.23
CCDC6-202ENST00000491922 WDHD1O75717 1129 aaPredicted RBP7.39□□□□□ -1.23
CCDC6-202ENST00000491922 TDO2P48775 406 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 NDUFA8P51970 172 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 SETQ01105 290 aaPredicted RBP7.39□□□□□ -1.23
CCDC6-202ENST00000491922 MYL5Q02045 173 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 FAM227BQ96M60 508 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 PNKPQ96T60 521 aa7.39□□□□□ -1.23
CCDC6-202ENST00000491922 NEDD4P46934 1319 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 A0A1B0GVL5 298 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 PFKFB2O60825 505 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 ATP1A3P13637 1013 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 AARSP49588 968 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC6-202ENST00000491922 TBX2Q13207 712 aaPredicted RBP7.38□□□□□ -1.23
CCDC6-202ENST00000491922 IDI1Q13907 227 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
CCDC6-202ENST00000491922 Q6ZUG5 572 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 KCNG4Q8TDN1 519 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 NEK1Q96PY6 1258 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 HSD3B7Q9H2F3 369 aa7.38□□□□□ -1.23
CCDC6-202ENST00000491922 A1CFQ9NQ94 594 aaKnown RBP7.38□□□□□ -1.23
CCDC6-202ENST00000491922 ZRANB1Q9UGI0 708 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms