RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 MTMR3Q13615 1198 aa6.95□□□□□ -1.3
VTA1-204ENST00000491881 RNF208Q9H0X6 261 aa6.95□□□□□ -1.3
VTA1-204ENST00000491881 PODXL2Q9NZ53 605 aa6.95□□□□□ -1.3
VTA1-204ENST00000491881 BIN2Q9UBW5 565 aaPredicted RBP6.95□□□□□ -1.3
VTA1-204ENST00000491881 SOWAHDA6NJG2 315 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 WDR64B1ANS9 1081 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 H3BRJ5 948 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 CYP2E1P05181 493 aaPredicted RBP6.94□□□□□ -1.3
VTA1-204ENST00000491881 PIP4K2BP78356 416 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 FKBP4Q02790 459 aaKnown RBP eCLIP6.94□□□□□ -1.3
VTA1-204ENST00000491881 FDX2Q6P4F2 183 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 SND1Q7KZF4 910 aaKnown RBP eCLIP6.94□□□□□ -1.3
VTA1-204ENST00000491881 CEP120Q8N960 986 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 POP1Q99575 1024 aaKnown RBP6.94□□□□□ -1.3
VTA1-204ENST00000491881 ADAM19Q9H013 955 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 HIF3AQ9Y2N7 669 aa6.94□□□□□ -1.3
VTA1-204ENST00000491881 GAS2O43903 313 aaKnown RBP6.93□□□□□ -1.3
VTA1-204ENST00000491881 ICMTO60725 284 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 NLRP12P59046 1061 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 FZD5Q13467 585 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 TMCO4Q5TGY1 634 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 WNT8BQ93098 351 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 RUSC1Q9BVN2 902 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 STIM2Q9P246 746 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 ADGRE2Q9UHX3 823 aa6.93□□□□□ -1.3
VTA1-204ENST00000491881 FAM13AO94988 1023 aa6.92□□□□□ -1.3
VTA1-204ENST00000491881 ABTB2Q8N961 1025 aa6.92□□□□□ -1.3
VTA1-204ENST00000491881 GIMAP7Q8NHV1 300 aa6.92□□□□□ -1.3
VTA1-204ENST00000491881 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
VTA1-204ENST00000491881 MFSD14AQ96MC6 490 aa6.92□□□□□ -1.3
VTA1-204ENST00000491881 OSGEPQ9NPF4 335 aa6.92□□□□□ -1.3
VTA1-204ENST00000491881 PIM2Q9P1W9 311 aa6.92□□□□□ -1.3
VTA1-204ENST00000491881 MPSTP25325 297 aa6.91□□□□□ -1.3
VTA1-204ENST00000491881 HOXA10P31260 410 aaPredicted RBP6.91□□□□□ -1.3
VTA1-204ENST00000491881 AAMPQ13685 434 aa6.91□□□□□ -1.3
VTA1-204ENST00000491881 ELP3Q9H9T3 547 aa6.91□□□□□ -1.3
VTA1-204ENST00000491881 ATG3Q9NT62 314 aa6.91□□□□□ -1.3
VTA1-204ENST00000491881 KANSL3Q9P2N6 904 aa6.91□□□□□ -1.3
VTA1-204ENST00000491881 ANGEL1Q9UNK9 670 aaKnown RBP6.91□□□□□ -1.3
VTA1-204ENST00000491881 ZBTB39O15060 712 aa6.9□□□□□ -1.3
VTA1-204ENST00000491881 MAP4P27816 1152 aaKnown RBP6.9□□□□□ -1.3
VTA1-204ENST00000491881 ARL4DP49703 201 aa6.9□□□□□ -1.3
VTA1-204ENST00000491881 PDE12Q6L8Q7 609 aaKnown RBP6.9□□□□□ -1.3
VTA1-204ENST00000491881 ZNF438Q7Z4V0 828 aa6.9□□□□□ -1.3
VTA1-204ENST00000491881 ABI1Q8IZP0 508 aa6.9□□□□□ -1.3
VTA1-204ENST00000491881 TMEM63CQ9P1W3 806 aa6.9□□□□□ -1.3
VTA1-204ENST00000491881 LEMD3Q9Y2U8 911 aa6.9□□□□□ -1.3
VTA1-204ENST00000491881 RXRBP28702 533 aa6.89□□□□□ -1.31
VTA1-204ENST00000491881 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
VTA1-204ENST00000491881 NOM1Q5C9Z4 860 aaKnown RBP6.89□□□□□ -1.31
VTA1-204ENST00000491881 ALKBH2Q6NS38 261 aa6.89□□□□□ -1.31
VTA1-204ENST00000491881 FBXL6Q8N531 539 aa6.89□□□□□ -1.31
VTA1-204ENST00000491881 EIF1AXP47813 144 aaKnown RBP6.88□□□□□ -1.31
VTA1-204ENST00000491881 SGO2Q562F6 1265 aa6.88□□□□□ -1.31
VTA1-204ENST00000491881 LCE1DQ5T752 114 aa6.88□□□□□ -1.31
VTA1-204ENST00000491881 NUDT16Q96DE0 195 aaKnown RBP6.88□□□□□ -1.31
VTA1-204ENST00000491881 OSBPL1AQ9BXW6 950 aa6.88□□□□□ -1.31
VTA1-204ENST00000491881 CNTN3Q9P232 1028 aa6.88□□□□□ -1.31
VTA1-204ENST00000491881 CCDC9Q9Y3X0 531 aaKnown RBP6.88□□□□□ -1.31
VTA1-204ENST00000491881 MEGF11A6BM72 1044 aa6.87□□□□□ -1.31
VTA1-204ENST00000491881 PDE2AO00408 941 aaPredicted RBP6.87□□□□□ -1.31
VTA1-204ENST00000491881 ACPPP15309 386 aa6.87□□□□□ -1.31
VTA1-204ENST00000491881 NPR3P17342 541 aa6.87□□□□□ -1.31
VTA1-204ENST00000491881 CES1P23141 567 aa6.87□□□□□ -1.31
VTA1-204ENST00000491881 C19orf57Q0VDD7 668 aa6.87□□□□□ -1.31
VTA1-204ENST00000491881 NUTM2GQ5VZR2 741 aa6.87□□□□□ -1.31
VTA1-204ENST00000491881 C12orf50Q8NA57 414 aaPredicted RBP6.87□□□□□ -1.31
VTA1-204ENST00000491881 SALL4Q9UJQ4 1053 aa6.87□□□□□ -1.31
VTA1-204ENST00000491881 NFKBIEO00221 500 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 NDUFB5O43674 189 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 F13BP05160 661 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 FOSL1P15407 271 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 DZANK1Q9NVP4 752 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 CCDC39Q9UFE4 941 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 BRPF3Q9ULD4 1205 aa6.86□□□□□ -1.31
VTA1-204ENST00000491881 TRPA1O75762 1119 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 RPLP1P05386 114 aaKnown RBP6.85□□□□□ -1.31
VTA1-204ENST00000491881 PCSK2P16519 638 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 MAPK1P28482 360 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 MFAP1P55081 439 aaKnown RBP6.85□□□□□ -1.31
VTA1-204ENST00000491881 ARHGAP4P98171 946 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 NFKBIBQ15653 356 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 CPSF6Q16630 551 aaKnown RBP eCLIP6.85□□□□□ -1.31
VTA1-204ENST00000491881 MSMPQ1L6U9 139 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 ATCAYQ86WG3 371 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 TP53INP2Q8IXH6 220 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 C1orf127Q8N9H9 656 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 USP26Q9BXU7 913 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 CYP4F12Q9HCS2 524 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 SOX13Q9UN79 622 aa6.85□□□□□ -1.31
VTA1-204ENST00000491881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
VTA1-204ENST00000491881 FAM95CA0A1B0GW59 222 aa6.84□□□□□ -1.31
VTA1-204ENST00000491881 DNM1Q05193 864 aaKnown RBP6.84□□□□□ -1.31
VTA1-204ENST00000491881 HGSNATQ68CP4 663 aa6.84□□□□□ -1.31
VTA1-204ENST00000491881 OGFOD2Q6N063 350 aa6.84□□□□□ -1.31
VTA1-204ENST00000491881 VSIG10LQ86VR7 867 aa6.84□□□□□ -1.31
VTA1-204ENST00000491881 TTC16Q8NEE8 873 aa6.84□□□□□ -1.31
VTA1-204ENST00000491881 FBXL18Q96ME1 805 aa6.84□□□□□ -1.31
VTA1-204ENST00000491881 HHIPQ96QV1 700 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms