RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 ARAP2Q8WZ64 1704 aa28.78■■■□□ 2.2
CPNE9-204ENST00000491802 SASH1O94885 1247 aa28.78■■■□□ 2.2
CPNE9-204ENST00000491802 BCAMP50895 628 aa28.78■■■□□ 2.2
CPNE9-204ENST00000491802 TBC1D10BQ4KMP7 808 aaPredicted RBP28.78■■■□□ 2.2
CPNE9-204ENST00000491802 FAM205AQ6ZU69 1335 aa28.77■■■□□ 2.2
CPNE9-204ENST00000491802 SURF6O75683 361 aaKnown RBP28.77■■■□□ 2.2
CPNE9-204ENST00000491802 EGFRP00533 1210 aa28.77■■■□□ 2.2
CPNE9-204ENST00000491802 OS9Q13438 667 aaPredicted RBP28.77■■■□□ 2.2
CPNE9-204ENST00000491802 CREBZFQ9NS37 354 aa28.77■■■□□ 2.2
CPNE9-204ENST00000491802 IQSEC3Q9UPP2 1182 aaPredicted RBP28.77■■■□□ 2.2
CPNE9-204ENST00000491802 POLR2AP24928 1970 aaKnown RBP28.76■■■□□ 2.19
CPNE9-204ENST00000491802 KIF4BQ2VIQ3 1234 aa28.76■■■□□ 2.19
CPNE9-204ENST00000491802 DNAJC5GQ8N7S2 189 aa28.76■■■□□ 2.19
CPNE9-204ENST00000491802 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.76■■■□□ 2.19
CPNE9-204ENST00000491802 RBM26Q5T8P6 1007 aaKnown RBP28.75■■■□□ 2.19
CPNE9-204ENST00000491802 CERS5Q8N5B7 392 aa28.75■■■□□ 2.19
CPNE9-204ENST00000491802 AKAP2Q9Y2D5 859 aa28.75■■■□□ 2.19
CPNE9-204ENST00000491802 FRAT2O75474 233 aaPredicted RBP28.74■■■□□ 2.19
CPNE9-204ENST00000491802 KIAA0825Q8IV33 1275 aa28.74■■■□□ 2.19
CPNE9-204ENST00000491802 RPAP2Q8IXW5 612 aaPredicted RBP28.74■■■□□ 2.19
CPNE9-204ENST00000491802 MYOZ2Q9NPC6 264 aa28.74■■■□□ 2.19
CPNE9-204ENST00000491802 NOP58Q9Y2X3 529 aaKnown RBP28.74■■■□□ 2.19
CPNE9-204ENST00000491802 A0A1B0GUL7 405 aa28.73■■■□□ 2.19
CPNE9-204ENST00000491802 ZBTB22O15209 634 aa28.73■■■□□ 2.19
CPNE9-204ENST00000491802 ADORA1P30542 326 aa28.73■■■□□ 2.19
CPNE9-204ENST00000491802 CHAF1AQ13111 956 aaPredicted RBP28.73■■■□□ 2.19
CPNE9-204ENST00000491802 OGFOD1Q8N543 542 aa28.73■■■□□ 2.19
CPNE9-204ENST00000491802 MYH13Q9UKX3 1938 aa28.73■■■□□ 2.19
CPNE9-204ENST00000491802 CDC37L1Q7L3B6 337 aa28.72■■■□□ 2.19
CPNE9-204ENST00000491802 TMEM88BA6NKF7 163 aa28.71■■■□□ 2.19
CPNE9-204ENST00000491802 HMMRO75330 724 aa28.71■■■□□ 2.19
CPNE9-204ENST00000491802 TIMM10P62072 90 aa28.71■■■□□ 2.19
CPNE9-204ENST00000491802 MFSD14BQ5SR56 506 aa28.71■■■□□ 2.19
CPNE9-204ENST00000491802 SIRT2Q8IXJ6 389 aa28.71■■■□□ 2.19
CPNE9-204ENST00000491802 COL1A1P02452 1464 aaPredicted RBP28.71■■■□□ 2.19
CPNE9-204ENST00000491802 PHKA1P46020 1223 aa28.7■■■□□ 2.18
CPNE9-204ENST00000491802 HDAC9Q9UKV0 1011 aa28.7■■■□□ 2.18
CPNE9-204ENST00000491802 EXOC6BQ9Y2D4 811 aa28.7■■■□□ 2.18
CPNE9-204ENST00000491802 PITPNM2Q9BZ72 1349 aa28.69■■■□□ 2.18
CPNE9-204ENST00000491802 ECM29Q5VYK3 1845 aa28.69■■■□□ 2.18
CPNE9-204ENST00000491802 F8W031 263 aaPredicted RBP28.69■■■□□ 2.18
CPNE9-204ENST00000491802 XAGE2Q96GT9 111 aa28.69■■■□□ 2.18
CPNE9-204ENST00000491802 NEUROD6Q96NK8 337 aa28.69■■■□□ 2.18
CPNE9-204ENST00000491802 HTRA3P83110 453 aa28.68■■■□□ 2.18
CPNE9-204ENST00000491802 KLRG1Q96E93 195 aa28.68■■■□□ 2.18
CPNE9-204ENST00000491802 GNL3LQ9NVN8 582 aaKnown RBP28.68■■■□□ 2.18
CPNE9-204ENST00000491802 CCDC102BQ68D86 513 aa28.67■■■□□ 2.18
CPNE9-204ENST00000491802 MTMR14Q8NCE2 650 aa28.67■■■□□ 2.18
CPNE9-204ENST00000491802 DCPSQ96C86 337 aaKnown RBP28.67■■■□□ 2.18
CPNE9-204ENST00000491802 ZBED3Q96IU2 234 aaPredicted RBP28.67■■■□□ 2.18
CPNE9-204ENST00000491802 CRBNQ96SW2 442 aa28.67■■■□□ 2.18
CPNE9-204ENST00000491802 GLIS2Q9BZE0 524 aaPredicted RBP28.67■■■□□ 2.18
CPNE9-204ENST00000491802 SCARF1Q14162 830 aa28.66■■■□□ 2.18
CPNE9-204ENST00000491802 TNNI3KQ59H18 835 aa28.66■■■□□ 2.18
CPNE9-204ENST00000491802 TBC1D22AQ8WUA7 517 aa28.66■■■□□ 2.18
CPNE9-204ENST00000491802 GPR108Q9NPR9 543 aa28.66■■■□□ 2.18
CPNE9-204ENST00000491802 GGA3Q9NZ52 723 aa28.66■■■□□ 2.18
CPNE9-204ENST00000491802 FPGT-TNNI3KV9GXZ4 949 aa28.66■■■□□ 2.18
CPNE9-204ENST00000491802 ASTN2O75129 1339 aaPredicted RBP28.66■■■□□ 2.18
CPNE9-204ENST00000491802 HSP90AB4PQ58FF6 505 aa28.65■■■□□ 2.18
CPNE9-204ENST00000491802 ERC1Q8IUD2 1116 aa28.65■■■□□ 2.18
CPNE9-204ENST00000491802 TRAF5O00463 557 aa28.64■■■□□ 2.18
CPNE9-204ENST00000491802 WNT10BO00744 389 aa28.64■■■□□ 2.18
CPNE9-204ENST00000491802 SEMA3EO15041 775 aa28.63■■■□□ 2.17
CPNE9-204ENST00000491802 GORABQ5T7V8 394 aa28.63■■■□□ 2.17
CPNE9-204ENST00000491802 CST9Q5W186 159 aa28.63■■■□□ 2.17
CPNE9-204ENST00000491802 KRT26Q7Z3Y9 468 aa28.63■■■□□ 2.17
CPNE9-204ENST00000491802 TTF2Q9UNY4 1162 aaKnown RBP28.63■■■□□ 2.17
CPNE9-204ENST00000491802 GRIK5Q16478 980 aa28.62■■■□□ 2.17
CPNE9-204ENST00000491802 NBPF9Q3BBW0 867 aa28.62■■■□□ 2.17
CPNE9-204ENST00000491802 DENND2AQ9ULE3 1009 aa28.62■■■□□ 2.17
CPNE9-204ENST00000491802 SUGT1Q9Y2Z0 365 aa28.62■■■□□ 2.17
CPNE9-204ENST00000491802 CNTNAP1P78357 1384 aa28.62■■■□□ 2.17
CPNE9-204ENST00000491802 FMR1Q06787 632 aaKnown RBP eCLIP28.61■■■□□ 2.17
CPNE9-204ENST00000491802 RASGRF1Q13972 1273 aa28.61■■■□□ 2.17
CPNE9-204ENST00000491802 ANGEL2Q5VTE6 544 aaKnown RBP28.61■■■□□ 2.17
CPNE9-204ENST00000491802 USP48Q86UV5 1035 aa28.61■■■□□ 2.17
CPNE9-204ENST00000491802 SULF1Q8IWU6 871 aa28.61■■■□□ 2.17
CPNE9-204ENST00000491802 JMYQ8N9B5 988 aa28.61■■■□□ 2.17
CPNE9-204ENST00000491802 WDR66Q8TBY9 1149 aa28.61■■■□□ 2.17
CPNE9-204ENST00000491802 RASSF10A6NK89 507 aa28.6■■■□□ 2.17
CPNE9-204ENST00000491802 APBB1O00213 710 aa28.6■■■□□ 2.17
CPNE9-204ENST00000491802 DLGAP5Q15398 846 aa28.6■■■□□ 2.17
CPNE9-204ENST00000491802 DBNDD2Q9BQY9 259 aa28.6■■■□□ 2.17
CPNE9-204ENST00000491802 CFAP100Q494V2 611 aa28.59■■■□□ 2.17
CPNE9-204ENST00000491802 RHPN1Q8TCX5 695 aa28.59■■■□□ 2.17
CPNE9-204ENST00000491802 SERPINA10Q9UK55 444 aa28.59■■■□□ 2.17
CPNE9-204ENST00000491802 SUPT16HQ9Y5B9 1047 aaKnown RBP28.59■■■□□ 2.17
CPNE9-204ENST00000491802 ADM5C9JUS6 153 aa28.58■■■□□ 2.17
CPNE9-204ENST00000491802 HDLBPQ00341 1268 aaKnown RBP28.58■■■□□ 2.17
CPNE9-204ENST00000491802 MRIQ9BWK5 157 aa28.58■■■□□ 2.17
CPNE9-204ENST00000491802 PCDHAC2Q9Y5I4 1007 aa28.58■■■□□ 2.17
CPNE9-204ENST00000491802 PDS5AQ29RF7 1337 aaKnown RBP28.58■■■□□ 2.17
CPNE9-204ENST00000491802 CELF2O95319 508 aaKnown RBP28.57■■■□□ 2.16
CPNE9-204ENST00000491802 RBM5P52756 815 aaKnown RBP eCLIP28.57■■■□□ 2.16
CPNE9-204ENST00000491802 EAF2Q96CJ1 260 aaPredicted RBP28.57■■■□□ 2.16
CPNE9-204ENST00000491802 KIF1BPQ96EK5 621 aa28.57■■■□□ 2.16
CPNE9-204ENST00000491802 IL1RAPL2Q9NP60 686 aa28.57■■■□□ 2.16
CPNE9-204ENST00000491802 TLR7Q9NYK1 1049 aaKnown RBP28.57■■■□□ 2.16
CPNE9-204ENST00000491802 DBNLQ9UJU6 430 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms