RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 VEGFBP49765 207 aa21.83■■□□□ 1.09
SMARCD3-214ENST00000491651 TDRD7Q8NHU6 1098 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-214ENST00000491651 TNNQ9UQP3 1299 aa21.83■■□□□ 1.09
SMARCD3-214ENST00000491651 PCNTO95613 3336 aa21.83■■□□□ 1.08
SMARCD3-214ENST00000491651 ASTN2O75129 1339 aaPredicted RBP21.82■■□□□ 1.08
SMARCD3-214ENST00000491651 PAPPA2Q9BXP8 1791 aa21.82■■□□□ 1.08
SMARCD3-214ENST00000491651 FTSJ3Q8IY81 847 aaKnown RBP21.82■■□□□ 1.08
SMARCD3-214ENST00000491651 HHIPL1Q96JK4 782 aa21.82■■□□□ 1.08
SMARCD3-214ENST00000491651 WNT10BO00744 389 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 GNAI2P04899 355 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 SLC5A1P13866 664 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 MTX1Q13505 466 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 PAXIP1Q6ZW49 1069 aaPredicted RBP21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 ATG9AQ7Z3C6 839 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 FBXO33Q7Z6M2 555 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 SAPCD2Q86UD0 394 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 CERS5Q8N5B7 392 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 TMEM57Q8N5G2 664 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 SIL1Q9H173 461 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 COPRSQ9NQ92 184 aa21.81■■□□□ 1.08
SMARCD3-214ENST00000491651 WDR33Q9C0J8 1336 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-214ENST00000491651 HSPA1AP0DMV8 641 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-214ENST00000491651 HSPA1BP0DMV9 641 aaKnown RBP21.8■■□□□ 1.08
SMARCD3-214ENST00000491651 FGFR2P21802 821 aa21.8■■□□□ 1.08
SMARCD3-214ENST00000491651 NBPF9Q3BBW0 867 aa21.8■■□□□ 1.08
SMARCD3-214ENST00000491651 FRAT2O75474 233 aaPredicted RBP21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 IL15P40933 162 aaPredicted RBP21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 MFSD14BQ5SR56 506 aa21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 DZIP1LQ8IYY4 767 aaKnown RBP21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 LPIN2Q92539 896 aa21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 CDCA5Q96FF9 252 aa21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 CAPNS2Q96L46 248 aa21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 CEP126Q9P2H0 1117 aa21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 JAG2Q9Y219 1238 aa21.79■■□□□ 1.08
SMARCD3-214ENST00000491651 COL1A1P02452 1464 aaPredicted RBP21.78■■□□□ 1.08
SMARCD3-214ENST00000491651 SRGAP3O43295 1099 aa21.78■■□□□ 1.08
SMARCD3-214ENST00000491651 DLGAP5Q15398 846 aa21.78■■□□□ 1.08
SMARCD3-214ENST00000491651 APOBEC3FQ8IUX4 373 aaKnown RBP21.78■■□□□ 1.08
SMARCD3-214ENST00000491651 C2orf69Q8N8R5 385 aa21.78■■□□□ 1.08
SMARCD3-214ENST00000491651 MTMR14Q8NCE2 650 aa21.78■■□□□ 1.08
SMARCD3-214ENST00000491651 GBA2Q9HCG7 927 aaPredicted RBP21.78■■□□□ 1.08
SMARCD3-214ENST00000491651 F8W031 263 aaPredicted RBP21.77■■□□□ 1.08
SMARCD3-214ENST00000491651 TBC1D22AQ8WUA7 517 aa21.77■■□□□ 1.08
SMARCD3-214ENST00000491651 ZBED3Q96IU2 234 aaPredicted RBP21.77■■□□□ 1.08
SMARCD3-214ENST00000491651 PA2G4Q9UQ80 394 aaKnown RBP21.77■■□□□ 1.08
SMARCD3-214ENST00000491651 HUNKP57058 714 aa21.76■■□□□ 1.07
SMARCD3-214ENST00000491651 ATP2B3Q16720 1220 aa21.76■■□□□ 1.07
SMARCD3-214ENST00000491651 CYP4F22Q6NT55 531 aa21.76■■□□□ 1.07
SMARCD3-214ENST00000491651 DLK2Q6UY11 383 aa21.76■■□□□ 1.07
SMARCD3-214ENST00000491651 MYO1BO43795 1136 aa21.75■■□□□ 1.07
SMARCD3-214ENST00000491651 BCAMP50895 628 aa21.75■■□□□ 1.07
SMARCD3-214ENST00000491651 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
SMARCD3-214ENST00000491651 ITPRIPQ8IWB1 547 aa21.75■■□□□ 1.07
SMARCD3-214ENST00000491651 IQSEC3Q9UPP2 1182 aaPredicted RBP21.75■■□□□ 1.07
SMARCD3-214ENST00000491651 AKAP11Q9UKA4 1901 aa21.74■■□□□ 1.07
SMARCD3-214ENST00000491651 CHAF1AQ13111 956 aaPredicted RBP21.74■■□□□ 1.07
SMARCD3-214ENST00000491651 GRM1Q13255 1194 aa21.74■■□□□ 1.07
SMARCD3-214ENST00000491651 AIDAQ96BJ3 306 aa21.74■■□□□ 1.07
SMARCD3-214ENST00000491651 TTF2Q9UNY4 1162 aaKnown RBP21.74■■□□□ 1.07
SMARCD3-214ENST00000491651 SPDYE2BA6NHP3 402 aa21.73■■□□□ 1.07
SMARCD3-214ENST00000491651 SPDYE6P0CI01 402 aa21.73■■□□□ 1.07
SMARCD3-214ENST00000491651 MS4A1P11836 297 aa21.73■■□□□ 1.07
SMARCD3-214ENST00000491651 NF2P35240 595 aa21.73■■□□□ 1.07
SMARCD3-214ENST00000491651 FKBP1BP68106 108 aa21.73■■□□□ 1.07
SMARCD3-214ENST00000491651 MAP2K1Q02750 393 aaPredicted RBP21.73■■□□□ 1.07
SMARCD3-214ENST00000491651 SERPINA10Q9UK55 444 aa21.73■■□□□ 1.07
SMARCD3-214ENST00000491651 RLBP1P12271 317 aa21.72■■□□□ 1.07
SMARCD3-214ENST00000491651 MAP2K2P36507 400 aa21.72■■□□□ 1.07
SMARCD3-214ENST00000491651 RBM5P52756 815 aaKnown RBP eCLIP21.72■■□□□ 1.07
SMARCD3-214ENST00000491651 GNL3LQ9NVN8 582 aaKnown RBP21.72■■□□□ 1.07
SMARCD3-214ENST00000491651 MAST3O60307 1309 aa21.72■■□□□ 1.07
SMARCD3-214ENST00000491651 MYH2Q9UKX2 1941 aa21.71■■□□□ 1.07
SMARCD3-214ENST00000491651 RGMBQ6NW40 437 aa21.71■■□□□ 1.07
SMARCD3-214ENST00000491651 SCAF8Q9UPN6 1271 aaKnown RBP21.71■■□□□ 1.07
SMARCD3-214ENST00000491651 SUGT1Q9Y2Z0 365 aa21.71■■□□□ 1.07
SMARCD3-214ENST00000491651 WDR66Q8TBY9 1149 aa21.7■■□□□ 1.06
SMARCD3-214ENST00000491651 WBP1LQ9NX94 342 aa21.7■■□□□ 1.06
SMARCD3-214ENST00000491651 AKAP2Q9Y2D5 859 aa21.7■■□□□ 1.06
SMARCD3-214ENST00000491651 PPP2R3BQ9Y5P8 575 aa21.7■■□□□ 1.06
SMARCD3-214ENST00000491651 PNMA6EA0A0J9YXQ4 647 aa21.69■■□□□ 1.06
SMARCD3-214ENST00000491651 SEMA3EO15041 775 aa21.69■■□□□ 1.06
SMARCD3-214ENST00000491651 HDLBPQ00341 1268 aaKnown RBP21.69■■□□□ 1.06
SMARCD3-214ENST00000491651 NOGQ13253 232 aa21.69■■□□□ 1.06
SMARCD3-214ENST00000491651 PRMT6Q96LA8 375 aaPredicted RBP21.69■■□□□ 1.06
SMARCD3-214ENST00000491651 ZBTB7BO15156 539 aaPredicted RBP21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 ZBTB22O15209 634 aa21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 CRKP46108 304 aa21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 G3BP1Q13283 466 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 CCDC102AQ96A19 550 aa21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 BEGAINQ9BUH8 593 aa21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 RCAN3Q9UKA8 241 aa21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 PCDHAC2Q9Y5I4 1007 aa21.68■■□□□ 1.06
SMARCD3-214ENST00000491651 AK9Q5TCS8 1911 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 A0A1B0GUL7 405 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 CLRN2A0PK11 232 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 FOXN1O15353 648 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 AOC2O75106 756 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 TFCP2Q12800 502 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 TEKT1Q969V4 418 aa21.67■■□□□ 1.06
SMARCD3-214ENST00000491651 DEFB129Q9H1M3 183 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms