RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 C19orf57Q0VDD7 668 aa8.7□□□□□ -1.02
PHC3-213ENST00000491258 HGSNATQ68CP4 663 aa8.7□□□□□ -1.02
PHC3-213ENST00000491258 SOX13Q9UN79 622 aa8.7□□□□□ -1.02
PHC3-213ENST00000491258 HIF3AQ9Y2N7 669 aa8.7□□□□□ -1.02
PHC3-213ENST00000491258 WDR64B1ANS9 1081 aa8.69□□□□□ -1.02
PHC3-213ENST00000491258 MPSTP25325 297 aa8.69□□□□□ -1.02
PHC3-213ENST00000491258 TXKP42681 527 aa8.69□□□□□ -1.02
PHC3-213ENST00000491258 PMEPA1Q969W9 287 aa8.69□□□□□ -1.02
PHC3-213ENST00000491258 MFSD14AQ96MC6 490 aa8.69□□□□□ -1.02
PHC3-213ENST00000491258 OSMRQ99650 979 aa8.69□□□□□ -1.02
PHC3-213ENST00000491258 CHRDQ9H2X0 955 aa8.69□□□□□ -1.02
PHC3-213ENST00000491258 MZF1P28698 734 aaPredicted RBP8.68□□□□□ -1.02
PHC3-213ENST00000491258 RXRBP28702 533 aa8.68□□□□□ -1.02
PHC3-213ENST00000491258 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
PHC3-213ENST00000491258 DTX1Q86Y01 620 aa8.68□□□□□ -1.02
PHC3-213ENST00000491258 TMEM102Q8N9M5 508 aaPredicted RBP8.68□□□□□ -1.02
PHC3-213ENST00000491258 WNT11O96014 354 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 MAP4P27816 1152 aaKnown RBP8.67□□□□□ -1.02
PHC3-213ENST00000491258 IKBKEQ14164 716 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 SGO2Q562F6 1265 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 BSNDQ8WZ55 320 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 ZKSCAN3Q9BRR0 538 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 USP26Q9BXU7 913 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 POLIQ9UNA4 740 aa8.67□□□□□ -1.02
PHC3-213ENST00000491258 MEGF11A6BM72 1044 aa8.66□□□□□ -1.02
PHC3-213ENST00000491258 SOX1O00570 391 aaPredicted RBP8.66□□□□□ -1.02
PHC3-213ENST00000491258 EREGO14944 169 aa8.66□□□□□ -1.02
PHC3-213ENST00000491258 YBX3P16989 372 aaKnown RBP eCLIP8.66□□□□□ -1.02
PHC3-213ENST00000491258 AAMPQ13685 434 aa8.66□□□□□ -1.02
PHC3-213ENST00000491258 C12orf50Q8NA57 414 aaPredicted RBP8.66□□□□□ -1.02
PHC3-213ENST00000491258 GTF3C2Q8WUA4 911 aaPredicted RBP8.66□□□□□ -1.02
PHC3-213ENST00000491258 NXPE3Q969Y0 559 aa8.66□□□□□ -1.02
PHC3-213ENST00000491258 SERPINA10Q9UK55 444 aa8.66□□□□□ -1.02
PHC3-213ENST00000491258 PHACTR2O75167 634 aa8.65□□□□□ -1.02
PHC3-213ENST00000491258 HOXA10P31260 410 aaPredicted RBP8.65□□□□□ -1.02
PHC3-213ENST00000491258 MTMR3Q13615 1198 aa8.65□□□□□ -1.02
PHC3-213ENST00000491258 FBXL6Q8N531 539 aa8.65□□□□□ -1.02
PHC3-213ENST00000491258 GIMAP7Q8NHV1 300 aa8.65□□□□□ -1.02
PHC3-213ENST00000491258 ASAP3Q8TDY4 903 aa8.65□□□□□ -1.02
PHC3-213ENST00000491258 ATG3Q9NT62 314 aa8.65□□□□□ -1.02
PHC3-213ENST00000491258 ALKBH2Q6NS38 261 aa8.64□□□□□ -1.03
PHC3-213ENST00000491258 VN1R5Q7Z5H4 357 aa8.64□□□□□ -1.03
PHC3-213ENST00000491258 CYP4F12Q9HCS2 524 aa8.64□□□□□ -1.03
PHC3-213ENST00000491258 PIM2Q9P1W9 311 aa8.64□□□□□ -1.03
PHC3-213ENST00000491258 RNF114Q9Y508 228 aa8.64□□□□□ -1.03
PHC3-213ENST00000491258 EDN3P14138 238 aa8.63□□□□□ -1.03
PHC3-213ENST00000491258 FOXD3Q9UJU5 478 aaPredicted RBP8.63□□□□□ -1.03
PHC3-213ENST00000491258 LEMD3Q9Y2U8 911 aa8.63□□□□□ -1.03
PHC3-213ENST00000491258 LOC100289279A0A1B0GTE1 492 aa8.62□□□□□ -1.03
PHC3-213ENST00000491258 TNFRSF21O75509 655 aa8.62□□□□□ -1.03
PHC3-213ENST00000491258 SMG8Q8ND04 991 aaKnown RBP8.62□□□□□ -1.03
PHC3-213ENST00000491258 SNX29Q8TEQ0 813 aa8.62□□□□□ -1.03
PHC3-213ENST00000491258 OSBPL1AQ9BXW6 950 aa8.62□□□□□ -1.03
PHC3-213ENST00000491258 TMPRSS13Q9BYE2 586 aa8.62□□□□□ -1.03
PHC3-213ENST00000491258 F13BP05160 661 aa8.61□□□□□ -1.03
PHC3-213ENST00000491258 USP11P51784 963 aa8.61□□□□□ -1.03
PHC3-213ENST00000491258 NFKBIBQ15653 356 aa8.61□□□□□ -1.03
PHC3-213ENST00000491258 TIAF1O95411 115 aa8.6□□□□□ -1.03
PHC3-213ENST00000491258 DRD2P14416 443 aa8.6□□□□□ -1.03
PHC3-213ENST00000491258 GSTM4Q03013 218 aa8.6□□□□□ -1.03
PHC3-213ENST00000491258 SUGCTQ9HAC7 445 aa8.6□□□□□ -1.03
PHC3-213ENST00000491258 LATS2Q9NRM7 1088 aa8.6□□□□□ -1.03
PHC3-213ENST00000491258 ANGEL1Q9UNK9 670 aaKnown RBP8.6□□□□□ -1.03
PHC3-213ENST00000491258 FAM95CA0A1B0GW59 222 aa8.59□□□□□ -1.03
PHC3-213ENST00000491258 ARID3CA6NKF2 412 aa8.59□□□□□ -1.03
PHC3-213ENST00000491258 DLGAP3O95886 979 aa8.59□□□□□ -1.03
PHC3-213ENST00000491258 ESRRAP11474 423 aaPredicted RBP8.59□□□□□ -1.03
PHC3-213ENST00000491258 EHHADHQ08426 723 aa8.59□□□□□ -1.03
PHC3-213ENST00000491258 PAOXQ6QHF9 649 aa8.59□□□□□ -1.03
PHC3-213ENST00000491258 FBLIM1Q8WUP2 373 aa8.59□□□□□ -1.03
PHC3-213ENST00000491258 BHLHE41Q9C0J9 482 aaPredicted RBP8.59□□□□□ -1.03
PHC3-213ENST00000491258 SOX17Q9H6I2 414 aaPredicted RBP8.59□□□□□ -1.03
PHC3-213ENST00000491258 AMOTL2Q9Y2J4 779 aa8.59□□□□□ -1.03
PHC3-213ENST00000491258 EXOSC6Q5RKV6 272 aaKnown RBP8.58□□□□□ -1.04
PHC3-213ENST00000491258 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
PHC3-213ENST00000491258 ADGRE2Q9UHX3 823 aa8.58□□□□□ -1.04
PHC3-213ENST00000491258 METTL12A8MUP2 240 aa8.57□□□□□ -1.04
PHC3-213ENST00000491258 FAM13AO94988 1023 aa8.57□□□□□ -1.04
PHC3-213ENST00000491258 SSFA2P28290 1259 aa8.57□□□□□ -1.04
PHC3-213ENST00000491258 USP5P45974 858 aa8.57□□□□□ -1.04
PHC3-213ENST00000491258 SHISA5Q8N114 240 aa8.57□□□□□ -1.04
PHC3-213ENST00000491258 POLR3DP05423 398 aaPredicted RBP8.56□□□□□ -1.04
PHC3-213ENST00000491258 FOSL1P15407 271 aa8.56□□□□□ -1.04
PHC3-213ENST00000491258 PEAR1Q5VY43 1037 aaPredicted RBP8.56□□□□□ -1.04
PHC3-213ENST00000491258 ABI1Q8IZP0 508 aa8.56□□□□□ -1.04
PHC3-213ENST00000491258 C2CD4AQ8NCU7 369 aaPredicted RBP8.56□□□□□ -1.04
PHC3-213ENST00000491258 YIPF2Q9BWQ6 316 aa8.56□□□□□ -1.04
PHC3-213ENST00000491258 TMEM88BA6NKF7 163 aa8.55□□□□□ -1.04
PHC3-213ENST00000491258 FZD6O60353 706 aa8.55□□□□□ -1.04
PHC3-213ENST00000491258 NPR3P17342 541 aa8.55□□□□□ -1.04
PHC3-213ENST00000491258 MSMPQ1L6U9 139 aa8.55□□□□□ -1.04
PHC3-213ENST00000491258 TBC1D32Q96NH3 1257 aa8.55□□□□□ -1.04
PHC3-213ENST00000491258 ZFYVE28Q9HCC9 887 aa8.55□□□□□ -1.04
PHC3-213ENST00000491258 MTMR7Q9Y216 660 aa8.55□□□□□ -1.04
PHC3-213ENST00000491258 ABL1P00519 1130 aa8.54□□□□□ -1.04
PHC3-213ENST00000491258 SOX4Q06945 474 aaPredicted RBP8.54□□□□□ -1.04
PHC3-213ENST00000491258 CPSF6Q16630 551 aaKnown RBP eCLIP8.54□□□□□ -1.04
PHC3-213ENST00000491258 METTL22Q9BUU2 404 aaPredicted RBP8.54□□□□□ -1.04
PHC3-213ENST00000491258 ANO2Q9NQ90 1003 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms