RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PHKA1P46020 1223 aa19.42■□□□□ 0.7
TRA2A-208ENST00000490942 DBNDD2Q9BQY9 259 aa19.42■□□□□ 0.7
TRA2A-208ENST00000490942 SUGT1Q9Y2Z0 365 aa19.42■□□□□ 0.7
TRA2A-208ENST00000490942 SCN9AQ15858 1988 aa19.42■□□□□ 0.7
TRA2A-208ENST00000490942 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
TRA2A-208ENST00000490942 IGHDP01880 384 aa19.41■□□□□ 0.7
TRA2A-208ENST00000490942 GTF2IP78347 998 aa19.41■□□□□ 0.7
TRA2A-208ENST00000490942 WDR66Q8TBY9 1149 aa19.41■□□□□ 0.7
TRA2A-208ENST00000490942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRA2A-208ENST00000490942 KCNQ5Q9NR82 932 aa19.41■□□□□ 0.7
TRA2A-208ENST00000490942 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
TRA2A-208ENST00000490942 SALL1Q9NSC2 1324 aa19.41■□□□□ 0.7
TRA2A-208ENST00000490942 APBB1O00213 710 aa19.4■□□□□ 0.7
TRA2A-208ENST00000490942 GMLQ99445 158 aa19.4■□□□□ 0.7
TRA2A-208ENST00000490942 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
TRA2A-208ENST00000490942 VEGFAP15692 232 aaPredicted RBP19.39■□□□□ 0.69
TRA2A-208ENST00000490942 SCNN1DP51172 638 aa19.39■□□□□ 0.69
TRA2A-208ENST00000490942 ZGPATQ8N5A5 531 aaKnown RBP19.39■□□□□ 0.69
TRA2A-208ENST00000490942 CCDC8Q9H0W5 538 aaPredicted RBP19.39■□□□□ 0.69
TRA2A-208ENST00000490942 GPRC5DQ9NZD1 345 aa19.39■□□□□ 0.69
TRA2A-208ENST00000490942 LMOD1P29536 600 aaPredicted RBP19.38■□□□□ 0.69
TRA2A-208ENST00000490942 SCN4AP35499 1836 aa19.38■□□□□ 0.69
TRA2A-208ENST00000490942 GMPSP49915 693 aaPredicted RBP19.38■□□□□ 0.69
TRA2A-208ENST00000490942 RASGRF1Q13972 1273 aa19.38■□□□□ 0.69
TRA2A-208ENST00000490942 TTC39AQ5SRH9 613 aa19.38■□□□□ 0.69
TRA2A-208ENST00000490942 GPBP1L1Q9HC44 474 aaPredicted RBP19.38■□□□□ 0.69
TRA2A-208ENST00000490942 ZNF646O15015 1829 aaPredicted RBP19.37■□□□□ 0.69
TRA2A-208ENST00000490942 ZNF280AP59817 542 aaPredicted RBP19.37■□□□□ 0.69
TRA2A-208ENST00000490942 NUCB1Q02818 461 aa19.37■□□□□ 0.69
TRA2A-208ENST00000490942 MFSD14BQ5SR56 506 aa19.37■□□□□ 0.69
TRA2A-208ENST00000490942 ANKRD45Q5TZF3 282 aa19.37■□□□□ 0.69
TRA2A-208ENST00000490942 SPATA5Q8NB90 893 aa19.37■□□□□ 0.69
TRA2A-208ENST00000490942 TLR7Q9NYK1 1049 aaKnown RBP19.37■□□□□ 0.69
TRA2A-208ENST00000490942 HACL1Q9UJ83 578 aa19.37■□□□□ 0.69
TRA2A-208ENST00000490942 USP17L8P0C7I0 530 aa19.36■□□□□ 0.69
TRA2A-208ENST00000490942 OGFOD1Q8N543 542 aa19.36■□□□□ 0.69
TRA2A-208ENST00000490942 ZNF784Q8NCA9 323 aaPredicted RBP19.36■□□□□ 0.69
TRA2A-208ENST00000490942 GPATCH3Q96I76 525 aa19.36■□□□□ 0.69
TRA2A-208ENST00000490942 MRIQ9BWK5 157 aa19.36■□□□□ 0.69
TRA2A-208ENST00000490942 HMG20BQ9P0W2 317 aa19.36■□□□□ 0.69
TRA2A-208ENST00000490942 COL1A1P02452 1464 aaPredicted RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 MAST3O60307 1309 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 TTC41PQ6P2S7 1318 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 POTECB2RU33 542 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 H7C1D1 291 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 SMARCA5O60264 1052 aaPredicted RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 ATP5JP18859 108 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 MCAMP43121 646 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 HDLBPQ00341 1268 aaKnown RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 TMED8Q6PL24 325 aaPredicted RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 PNMA8AQ86V59 439 aaPredicted RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 CHD1LQ86WJ1 897 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 CERS5Q8N5B7 392 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 ECHDC1Q9NTX5 307 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 CNOT7Q9UIV1 285 aaKnown RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 HDAC9Q9UKV0 1011 aa19.35■□□□□ 0.69
TRA2A-208ENST00000490942 IQSEC3Q9UPP2 1182 aaPredicted RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
TRA2A-208ENST00000490942 CHAF1AQ13111 956 aaPredicted RBP19.34■□□□□ 0.69
TRA2A-208ENST00000490942 SPTY2D1Q68D10 685 aaPredicted RBP19.34■□□□□ 0.69
TRA2A-208ENST00000490942 CENPQQ7L2Z9 268 aaPredicted RBP19.34■□□□□ 0.69
TRA2A-208ENST00000490942 FBXW7Q969H0 707 aa19.34■□□□□ 0.69
TRA2A-208ENST00000490942 ADARB2Q9NS39 739 aaKnown RBP19.34■□□□□ 0.69
TRA2A-208ENST00000490942 EPHX2P34913 555 aa19.33■□□□□ 0.68
TRA2A-208ENST00000490942 USP50Q70EL3 339 aaPredicted RBP19.33■□□□□ 0.68
TRA2A-208ENST00000490942 MICALL2Q8IY33 904 aa19.33■□□□□ 0.68
TRA2A-208ENST00000490942 TAF1DQ9H5J8 278 aaPredicted RBP19.33■□□□□ 0.68
TRA2A-208ENST00000490942 SALL3Q9BXA9 1300 aa19.32■□□□□ 0.68
TRA2A-208ENST00000490942 MYH13Q9UKX3 1938 aa19.32■□□□□ 0.68
TRA2A-208ENST00000490942 SCARF1Q14162 830 aa19.32■□□□□ 0.68
TRA2A-208ENST00000490942 MTMR14Q8NCE2 650 aa19.32■□□□□ 0.68
TRA2A-208ENST00000490942 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
TRA2A-208ENST00000490942 NMRK2Q9NPI5 230 aa19.32■□□□□ 0.68
TRA2A-208ENST00000490942 STAP2Q9UGK3 403 aa19.32■□□□□ 0.68
TRA2A-208ENST00000490942 ERC2O15083 957 aa19.31■□□□□ 0.68
TRA2A-208ENST00000490942 MX1P20591 662 aa19.31■□□□□ 0.68
TRA2A-208ENST00000490942 EPS15P42566 896 aa19.31■□□□□ 0.68
TRA2A-208ENST00000490942 TTF1Q15361 905 aaPredicted RBP19.31■□□□□ 0.68
TRA2A-208ENST00000490942 KIAA0825Q8IV33 1275 aa19.31■□□□□ 0.68
TRA2A-208ENST00000490942 ZC3H15Q8WU90 426 aaKnown RBP19.31■□□□□ 0.68
TRA2A-208ENST00000490942 CCDC136Q96JN2 1154 aa19.31■□□□□ 0.68
TRA2A-208ENST00000490942 MXD3Q9BW11 206 aa19.31■□□□□ 0.68
TRA2A-208ENST00000490942 SERPINA10Q9UK55 444 aa19.31■□□□□ 0.68
TRA2A-208ENST00000490942 AOX1Q06278 1338 aa19.3■□□□□ 0.68
TRA2A-208ENST00000490942 B4GALNT3Q6L9W6 998 aa19.3■□□□□ 0.68
TRA2A-208ENST00000490942 ZNF526Q8TF50 670 aaPredicted RBP19.3■□□□□ 0.68
TRA2A-208ENST00000490942 HAUS7Q99871 368 aa19.3■□□□□ 0.68
TRA2A-208ENST00000490942 PPP4R2Q9NY27 417 aa19.3■□□□□ 0.68
TRA2A-208ENST00000490942 TTF2Q9UNY4 1162 aaKnown RBP19.3■□□□□ 0.68
TRA2A-208ENST00000490942 JAG2Q9Y219 1238 aa19.3■□□□□ 0.68
TRA2A-208ENST00000490942 AKAP11Q9UKA4 1901 aa19.29■□□□□ 0.68
TRA2A-208ENST00000490942 KIF3CO14782 793 aa19.29■□□□□ 0.68
TRA2A-208ENST00000490942 GLRX3O76003 335 aaKnown RBP19.29■□□□□ 0.68
TRA2A-208ENST00000490942 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
TRA2A-208ENST00000490942 HHIPL2Q6UWX4 724 aa19.29■□□□□ 0.68
TRA2A-208ENST00000490942 SLF2Q8IX21 1173 aa19.29■□□□□ 0.68
TRA2A-208ENST00000490942 LNPKQ9C0E8 428 aa19.29■□□□□ 0.68
TRA2A-208ENST00000490942 OSBPL3Q9H4L5 887 aa19.29■□□□□ 0.68
TRA2A-208ENST00000490942 MYOZ2Q9NPC6 264 aa19.29■□□□□ 0.68
TRA2A-208ENST00000490942 CYP2E1P05181 493 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms