RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 ZGPATQ8N5A5 531 aaKnown RBP13.32□□□□□ -0.28
VARS2-210ENST00000490699 FBXW7Q969H0 707 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 FAM84BQ96KN1 310 aaPredicted RBP13.32□□□□□ -0.28
VARS2-210ENST00000490699 OSBPL3Q9H4L5 887 aa13.32□□□□□ -0.28
VARS2-210ENST00000490699 ZNF277Q9NRM2 450 aaPredicted RBP13.32□□□□□ -0.28
VARS2-210ENST00000490699 LMNB1P20700 586 aa13.31□□□□□ -0.28
VARS2-210ENST00000490699 CNTROBQ8N137 903 aa13.31□□□□□ -0.28
VARS2-210ENST00000490699 OTUD7AQ8TE49 926 aaPredicted RBP13.31□□□□□ -0.28
VARS2-210ENST00000490699 TBC1D22AQ8WUA7 517 aa13.31□□□□□ -0.28
VARS2-210ENST00000490699 GPR101Q96P66 508 aaPredicted RBP13.31□□□□□ -0.28
VARS2-210ENST00000490699 DNAJC2Q99543 621 aaKnown RBP13.31□□□□□ -0.28
VARS2-210ENST00000490699 CD209Q9NNX6 404 aa13.31□□□□□ -0.28
VARS2-210ENST00000490699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.31□□□□□ -0.28
VARS2-210ENST00000490699 ECE2O60344 883 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 KLRK1P26718 216 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 PDE4AP27815 886 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 CHAF1AQ13111 956 aaPredicted RBP13.3□□□□□ -0.28
VARS2-210ENST00000490699 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 SPTY2D1Q68D10 685 aaPredicted RBP13.3□□□□□ -0.28
VARS2-210ENST00000490699 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 SPATA5Q8NB90 893 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 WDR66Q8TBY9 1149 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.283e-11■■■■■ 48.8
VARS2-210ENST00000490699 BOLA2Q9H3K6 86 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 PDS5AQ29RF7 1337 aaKnown RBP13.3□□□□□ -0.28
VARS2-210ENST00000490699 SNED1Q8TER0 1413 aa13.3□□□□□ -0.28
VARS2-210ENST00000490699 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 NFKBIEO00221 500 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 IL1R1P14778 569 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 YBX3P16989 372 aaKnown RBP eCLIP13.29□□□□□ -0.28
VARS2-210ENST00000490699 EIF6P56537 245 aaKnown RBP13.29□□□□□ -0.28
VARS2-210ENST00000490699 RASSF7Q02833 373 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 TTC22Q5TAA0 569 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 ZSCAN25Q6NSZ9 544 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 SLC51AQ86UW1 340 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 HAUS7Q99871 368 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 DBNDD1Q9H9R9 158 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
VARS2-210ENST00000490699 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
VARS2-210ENST00000490699 RASGRF1Q13972 1273 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 TNIP1Q15025 636 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 TXNRD3Q86VQ6 643 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 TDRD7Q8NHU6 1098 aaKnown RBP13.28□□□□□ -0.28
VARS2-210ENST00000490699 PI4K2BQ8TCG2 481 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 EVI5LQ96CN4 794 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 LRP2BPQ9P2M1 347 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 CLEC11AQ9Y240 323 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 CHD4Q14839 1912 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
VARS2-210ENST00000490699 USP17L3A6NCW0 530 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 USP17L4A6NCW7 530 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
VARS2-210ENST00000490699 HIP1O00291 1037 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 GOLIM4O00461 696 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 EIF5BO60841 1220 aaKnown RBP13.27□□□□□ -0.29
VARS2-210ENST00000490699 IGSF3O75054 1194 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 MCAMP43121 646 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 MAP3K12Q12852 859 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 SLF2Q8IX21 1173 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
VARS2-210ENST00000490699 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 RNF181Q9P0P0 153 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 ABCF2Q9UG63 623 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 MYO3BQ8WXR4 1341 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 IRS2Q9Y4H2 1338 aa13.27□□□□□ -0.29
VARS2-210ENST00000490699 MAST3O60307 1309 aa13.26□□□□□ -0.29
VARS2-210ENST00000490699 ZAP70P43403 619 aa13.26□□□□□ -0.29
VARS2-210ENST00000490699 GTF2IP78347 998 aa13.26□□□□□ -0.29
VARS2-210ENST00000490699 AK9Q5TCS8 1911 aa13.26□□□□□ -0.29
VARS2-210ENST00000490699 STRIP1Q5VSL9 837 aa13.26□□□□□ -0.29
VARS2-210ENST00000490699 TMED8Q6PL24 325 aaPredicted RBP13.26□□□□□ -0.29
VARS2-210ENST00000490699 ERICH6Q7L0X2 663 aa13.26□□□□□ -0.29
VARS2-210ENST00000490699 TICAM2Q86XR7 235 aa13.26□□□□□ -0.29
VARS2-210ENST00000490699 DZIP1Q86YF9 867 aaKnown RBP13.26□□□□□ -0.29
VARS2-210ENST00000490699 FAM205AQ6ZU69 1335 aa13.25□□□□□ -0.29
VARS2-210ENST00000490699 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
VARS2-210ENST00000490699 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
VARS2-210ENST00000490699 LDHBP07195 334 aaKnown RBP13.25□□□□□ -0.29
VARS2-210ENST00000490699 ZFYP08048 801 aaPredicted RBP13.25□□□□□ -0.29
VARS2-210ENST00000490699 GSTO1P78417 241 aa13.25□□□□□ -0.29
VARS2-210ENST00000490699 MFSD14BQ5SR56 506 aa13.25□□□□□ -0.29
VARS2-210ENST00000490699 CIAPIN1Q6FI81 312 aa13.25□□□□□ -0.29
VARS2-210ENST00000490699 NOL10Q9BSC4 688 aaKnown RBP13.25□□□□□ -0.29
VARS2-210ENST00000490699 RAI14Q9P0K7 980 aa13.25□□□□□ -0.29
VARS2-210ENST00000490699 SUGT1Q9Y2Z0 365 aa13.25□□□□□ -0.29
VARS2-210ENST00000490699 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
VARS2-210ENST00000490699 SALL1Q9NSC2 1324 aa13.24□□□□□ -0.29
VARS2-210ENST00000490699 ZC3H4Q9UPT8 1303 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms